BAC Information

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BAC

Clone NameB6Ng01-010N12
Chromosome10 (Build37)
Map Location 95,085,215 - 95,240,045
singlet/doubletdoublet
Overlap geneEG628119
Upstream geneEG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4
Downstream geneEea1, EG432491, LOC667380, Btg1, LOC628256
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010N12.bB6Ng01-010N12.g
ACCDH846396DH846397
length588608
definitionDH846396|Mus musculus domesticus DNA, BAC clone: B6Ng01-010N12, 5' end.DH846397|Mus musculus domesticus DNA, BAC clone: B6Ng01-010N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,085,215 - 95,085,808)(95,239,438 - 95,240,045)
sequence
tgttttgaaaacacacacacacacacacacacacacacacaccccactgg
gactaagaactcaaatgggtgaacctcaaattttttttttttggtaacaa
ttacgtgttggaaaaaaaaaccaacttgaatttatttatttaaaagatat
gtcagccgagcgtggtggctcatgcctttattcccagcactcaagaggca
gaggccaacggatttctgagttcgaggccagactggtctacaaagtgagt
tccaggacagccagggctatacagagaaaccctgtctcgaaaaagcaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatttaaaaaattaaaaaaaa
aaattcaaattaatgtcttctgtttcctttttcttttccagtgtgactat
ttaaaaaaatccccagttacacaggaggctcccattttattcctattggg
caacacccagtctaccaagttaaaggcttgtttactgcagttgctaagat
attctccctttctctatctctctctttcttgagaacactagctccctccc
cccacctgtgtgtgtatatgtgtgtgtgtgtgtgtgtg
gaattcactacataccccatcctgcccttgaacctgaagtcctcctgcct
ctgccttctgagtgctggcaatagaggaatgtgccacaaatcacctactt
tctaagtcattgatgcactttgcctgaacatgtgactatccctagctaac
ctttgtggcataggaggaaatctgtcaatagctttttgaaatatgactct
gactctgaggttttggcttatcagtgtaggtgaactgagtttcgggcaga
atgcttgtgtgaaggttacaaaaaaaaatcaccttgttttagaaatgtta
tgatctgaaacaagtgctcaaaaggccaaaggcagcaggtaaaagatggg
caccagccttgtgtgaggctcatgttgatggctgcctttccaaaggatgg
aaggaataccctctacctccctcagagaccttaaaagtatagtaactaaa
ctggatgtggtgatacacaattgtaatcccagtgcttaggaggcagaggc
aggaggatcaggagtttgaggccagccttggatatacagaaggttcaggg
ccagtttgggatacacaagaagaaaaataatgtgtgcatgcccgtgtgtg
tgtatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_95085215_95085808
seq2: B6Ng01-010N12.b_46_639

seq1  GAATTCTGTTTTGAAAACACACACACACACACACACACACACACACACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTGAAAACACACACACACACACACACACACACACACACCC  50

seq1  CACTGGGACTAAGAACTCAAATGGGTGAACCTCAAATTTTTTTTTTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGACTAAGAACTCAAATGGGTGAACCTCAAATTTTTTTTTTTTGG  100

seq1  TAACAATTACGTGTTGGAAAAAAAAACCAACTTGAATTTATTTATTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTACGTGTTGGAAAAAAAAACCAACTTGAATTTATTTATTTAAA  150

seq1  AGATATGTCAGCCGAGCGTGGTGGCTCATGCCTTTATTCCCAGCACTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGTCAGCCGAGCGTGGTGGCTCATGCCTTTATTCCCAGCACTCAA  200

seq1  GAGGCAGAGGCCAACGGATTTCTGAGTTCGAGGCCAGACTGGTCTACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCCAACGGATTTCTGAGTTCGAGGCCAGACTGGTCTACAAA  250

seq1  GTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAA  300

seq1  GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAATTAA  350
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAAAAATTAA  350

seq1  AAAAAAAAATTCAGATTAATGTCTTCTGTTTCCTTTTTCTTTTCCAGTGT  400
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATTCAAATTAATGTCTTCTGTTTCCTTTTTCTTTTCCAGTGT  400

seq1  GACTATTTAGAAAAATCCCCAGTTACACAGGAGGCTCCCATTTTATTCCT  450
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTTAAAAAAATCCCCAGTTACACAGGAGGCTCCCATTTTATTCCT  450

seq1  ATTGGGCAACACCCAGTCTACCAAGTTAAAGGCTTGTTTACTGCAGTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGCAACACCCAGTCTACCAAGTTAAAGGCTTGTTTACTGCAGTTGC  500

seq1  TAAGATATTCTCCCTTTCTCTATCTCTCTCTTTCTTGAGAACACTAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATTCTCCCTTTCTCTATCTCTCTCTTTCTTGAGAACACTAGCTC  550

seq1  CCTCCCCCCACCTGTGTGTGTATATGTGTGTGTGTGTGTGTGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCACCTGTGTGTGTATATGTGTGTGTGTGTGTGTGTG  594

seq1: chr10_95239438_95240045
seq2: B6Ng01-010N12.g_69_676 (reverse)

seq1  CACATACACACACACGGGCATGCACACATTATTTTTCTTCTTGTGTATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACACACACACGGGCATGCACACATTATTTTTCTTCTTGTGTATCC  50

seq1  CAAACTGGCCCTGAACCTTCTGTATATCCAAGGCTGGCCTCAAACTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGGCCCTGAACCTTCTGTATATCCAAGGCTGGCCTCAAACTCCTG  100

seq1  ATCCTCCTGCCTCTGCCTCCTAAGCACTGGGATTACAATTGTGTATCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTGCCTCTGCCTCCTAAGCACTGGGATTACAATTGTGTATCACC  150

seq1  ACATCCAGTTTAGTTACTATACTTTTAAGGTCTCTGAGGGAGGTAGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAGTTTAGTTACTATACTTTTAAGGTCTCTGAGGGAGGTAGAGGG  200

seq1  TATTCCTTCCATCCTTTGGAAAGGCAGCCATCAACATGAGCCTCACACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTCCATCCTTTGGAAAGGCAGCCATCAACATGAGCCTCACACAA  250

seq1  GGCTGGTGCCCATCTTTTACCTGCTGCCTTTGGCCTTTTGAGCACTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGCCCATCTTTTACCTGCTGCCTTTGGCCTTTTGAGCACTTGTT  300

seq1  TCAGATCATAACATTTCTAAAACAAGGTGATTTTTTTTTGTAACCTTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCATAACATTTCTAAAACAAGGTGATTTTTTTTTGTAACCTTCAC  350

seq1  ACAAGCATTCTGCCCGAAACTCAGTTCACCTACACTGATAAGCCAAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATTCTGCCCGAAACTCAGTTCACCTACACTGATAAGCCAAAACC  400

seq1  TCAGAGTCAGAGTCATATTTCAAAAAGCTATTGACAGATTTCCTCCTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTCAGAGTCATATTTCAAAAAGCTATTGACAGATTTCCTCCTATG  450

seq1  CCACAAAGGTTAGCTAGGGATAGTCACATGTTCAGGCAAAGTGCATCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAGGTTAGCTAGGGATAGTCACATGTTCAGGCAAAGTGCATCAAT  500

seq1  GACTTAGAAAGTAGGTGATTTGTGGCACATTCCTCTATTGCCAGCACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGAAAGTAGGTGATTTGTGGCACATTCCTCTATTGCCAGCACTCA  550

seq1  GAAGGCAGAGGCAGGAGGACTTCAGGTTCAAGGGCAGGATGGGGTATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGAGGCAGGAGGACTTCAGGTTCAAGGGCAGGATGGGGTATGTA  600

seq1  GTGAATTC  608
      ||||||||
seq2  GTGAATTC  608