BAC Information

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BAC

Clone NameB6Ng01-010P11
Chromosome10 (Build37)13 (Build37)
Map Location 104,054,446 - 104,054,97951,706,016 - 51,706,565
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010P11.bB6Ng01-010P11.g
ACCDH846484DH846485
length936624
definitionDH846484|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P11, 5' end.DH846485|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,446 - 104,054,979)(51,706,016 - 51,706,565)
sequence
gaattccatgcctgacctacagctgtactatagagcaattgtgataaaac
tgcatggtactggtataccaacaggcaggtagaccaatggaatagaattg
aagacccaaaaatgaacccacacacctatggtcacttgatctttgacaag
ggagctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtg
ctggcacaactggtggttatcatgtagaagaatgcaaattgatccattcc
tatctccttgtactaaggtcaaatctaagtggatcaaggaactccacata
aaaccagagacactgaaacttatagaggagaaagtggggaaaagccttga
agatatgggcacaggggaaaaattcctgaatagaacaatgcttatgccgt
aagattgagaattgacaaatgggacctcataaaattgcaaagcttctgta
aggcaaaagacactgtcaataaaacaaaaaggccaccaacagactgggaa
agaatctttacctatcctaaatcagataggggactaatatccaatatata
taaagaactcaagaaggtggaccccagaaagtcaaataaccccattaaaa
aatggggctcagagctaaacaaagaattctcaattgaggaatatcgaatg
gctaagaagcacctgaaaaaatgttcaacatccttaaccatcagggaaat
gcaaatcaaaacaaccctgagattctgcctcacaccagtcagaatggcta
agatcaaaaattcatgtgacagcagatgctggcgtggatgtggagaaaga
ggaacactcctccaatgttggtggtattgcaagcttgtacaaccactctt
ggaaatcagtctggcggttcctcagaaaataggacatagtactaccggaa
gatccagcaatacctcttctgggcatatatccagaa
gaattcatttggaactcaatgtgtagattaaacagagctcacgactgacc
tttaagcgtttgtagtagttcgattactaaataccttcttgtctttcatt
gcttccgtccacatccacctccagaactctggcttcttctagggatctaa
gaactctccagtttcccggcagccattttatttaatttattactattatt
actttttaatttttaaatttttgttgagacagagtcttctgtaaaccagg
ctagcctcaaattcacaaagcagccagatatggacttgaactctttgctc
tatcctgccttcccgtcccaagtgttggaattacagagtgtgcaccctac
ctggcttcatgtagtgctgggtactgaatgcttgactgcactctaacaac
tccatcaggcctccagcctagttataaaggctgaacagtgccccgttttg
tggaggtccctcattttgttggctcattgctctatcaatggccactgggg
tcctcccaccagtagccagttacaagcaatgtggctgtgtatatgggtgt
gagatctcttggaagtcctgatttcagcagttctgggtatatatccagaa
gtggaattaattaattgcacagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054446_104054979
seq2: B6Ng01-010P11.b_57_584 (reverse)

seq1  GATATTAGTCCCCTATCTGAATTAGGATAGGTAAAGATCCTTTCTCAATC  50
      |||||||||||||||||||| ||||||||||||||||| ||||| || ||
seq2  GATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATTCTTTCCCAGTC  50

seq1  TGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGC  100
      ||||||||| |||||||| |||||||| |||||||||||||| |||||||
seq2  TGTTGGTGGCCTTTTTGTTTTATTGACAGTGTCTTTTGCCTTACAGAAGC  100

seq1  TTTGCAATTTTATGAGGTCCCATTTATCAACTCTCTATCTTACAGCACAA  150
      ||||||||||||||||||||||||| |||| |||| ||||||| ||| ||
seq2  TTTGCAATTTTATGAGGTCCCATTTGTCAATTCTCAATCTTACGGCATAA  150

seq1  GCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAG  200
      | |||   ||||||||||||||||||||||||||| ||||||||||| ||
seq2  G-CAT---TGTTCTATTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAG  196

seq1  GCTTTTCCCTACTTTTTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGT  250
      ||||||||| ||||| ||||||||||||||||||||||||||||||||||
seq2  GCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGT  246

seq1  GGAGTTCCTTAATCCACTTAGATTTTACCTTAGTACAAGGAGATAGTAAT  300
      |||||||||| |||||||||||||| |||||||||||||||||||| |||
seq2  GGAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAAT  296

seq1  TGATCAATTCACAATCTTCTACATGATAACAGCCAGTTGTGCCAGCATGA  350
       ||||||||  || ||||||||||||||||  |||||||||||||||  |
seq2  GGATCAATTTGCATTCTTCTACATGATAACCACCAGTTGTGCCAGCACCA  346

seq1  TTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATAGTTTTAGCTCCCTTG  400
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  TTTGTTGAAAATGCTGTC-TTTTTTCCACTGGATGGTTTTAGCTCCCTTG  395

seq1  TCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATCTCTGGATCTTCAAT  450
      ||||||||||||||||||||||||||||||||||| | ||| ||||||||
seq2  TCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTTTGGGTCTTCAAT  445

seq1  TCTGTTCCATTGGTCTACTTGTCTGTCGCTATACAAGTACCATGCAGTTT  500
      ||| |||||||||||||| || |||| | ||||| |||||||||||| ||
seq2  TCTATTCCATTGGTCTACCTGCCTGTTGGTATACCAGTACCATGCAG-TT  494

seq1  TTATCACAATTGCTCTGTAGTACAGTTTTAGGTC  534
      |||||||||||||||| |||||||| | ||||||
seq2  TTATCACAATTGCTCTATAGTACAGCTGTAGGTC  528

seq1: chr13_51706016_51706565
seq2: B6Ng01-010P11.g_66_615 (reverse)

seq1  ACACCCATATACACAGCCACATTGCTTGTAACTGGCTACTGGTGGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATATACACAGCCACATTGCTTGTAACTGGCTACTGGTGGGAGGA  50

seq1  CCCCAGTGGCCATTGATAGAGCAATGAGCCAACAAAATGAGGGACCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTGGCCATTGATAGAGCAATGAGCCAACAAAATGAGGGACCTCCA  100

seq1  CAAAACGGGGCACTGTTCAGCCTTTATAACTAGGCTGGAGGCCTGATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACGGGGCACTGTTCAGCCTTTATAACTAGGCTGGAGGCCTGATGGA  150

seq1  GTTGTTAGAGTGCAGTCAAGCATTCAGTACCCAGCACTACATGAAGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTAGAGTGCAGTCAAGCATTCAGTACCCAGCACTACATGAAGCCAG  200

seq1  GTAGGGTGCACACTCTGTAATTCCAACACTTGGGACGGGAAGGCAGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTGCACACTCTGTAATTCCAACACTTGGGACGGGAAGGCAGGATA  250

seq1  GAGCAAAGAGTTCAAGTCCATATCTGGCTGCTTTGTGAATTTGAGGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAGAGTTCAAGTCCATATCTGGCTGCTTTGTGAATTTGAGGCTAG  300

seq1  CCTGGTTTACAGAAGACTCTGTCTCAACAAAAATTTAAAAATTAAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTACAGAAGACTCTGTCTCAACAAAAATTTAAAAATTAAAAAGT  350

seq1  AATAATAGTAATAAATTAAATAAAATGGCTGCCGGGAAACTGGAGAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAGTAATAAATTAAATAAAATGGCTGCCGGGAAACTGGAGAGTTC  400

seq1  TTAGATCCCTAGAAGAAGCCAGAGTTCTGGAGGTGGATGTGGACGGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCCCTAGAAGAAGCCAGAGTTCTGGAGGTGGATGTGGACGGAAGC  450

seq1  AATGAAAGACAAGAAGGTATTTAGTAATCGAACTACTACAAACGCTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGACAAGAAGGTATTTAGTAATCGAACTACTACAAACGCTTAAA  500

seq1  GGTCAGTCGTGAGCTCTGTTTAATCTACACATTGAGTTCCAAATGAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTCGTGAGCTCTGTTTAATCTACACATTGAGTTCCAAATGAATTC  550