BAC Information

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BAC

Clone NameB6Ng01-018P11
Chromosome10 (Build37)
Map Location 68,579,350 - 68,714,280
singlet/doubletdoublet
Overlap geneA930033H14Rik, Rhobtb1
Upstream geneArid5b, LOC100040136, 1700040L02Rik, EG665342, Tmem26
Downstream geneLOC100040182, Cdc2a, LOC100039696, EG382371, Ank3, LOC100039734, 5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018P11.bB6Ng01-018P11.g
ACCDH852212DH852213
length1,174158
definitionDH852212|Mus musculus domesticus DNA, BAC clone: B6Ng01-018P11, 5' end.DH852213|Mus musculus domesticus DNA, BAC clone: B6Ng01-018P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,579,350 - 68,580,532)(68,714,123 - 68,714,280)
sequence
gaattctatgcatcggatccttccattaaaatgagcatagcattcccatt
agtagacctaataagagcatcaccaaagcaaataggtaactgtaaagtaa
atgtcactactcctgtttttatgtctgatgtgaactctaagaatgcacca
tgcaaagtgattcttctggaccttaaaaaaaataaatactcaaaaaacag
tagttaggcaggtttcatcctcaacgtgagtctggccatgtttgagatgc
agtcactacttagggcaatcactgcagcacaccatgaaatgaccaaaatt
ggctgcttctttggaggccattcccaagtggagatgttagagaaggaggt
agggagacaactttcagaggaaagtagaagaacaaaagatgacatcgtga
aaatgcacatggccacaatgtgtctagacccaacgtttgagttatctttg
agactcaaggatttcccagaggccaataatccagatgtaaaggttagcat
ttatacatgtgtcaagtttcctttgagctctgagataaatcctttgctca
taaagccttggtttcaagagaataatagatacagctagcctatatttgtc
tcagggttttcagtccttccaaggcatacataatatctcatctcctcatg
gacttgggactgtgtggcctagcattgccctatgaaatgtaatcgggatt
aatggacttcacttctcaaaaacgaagaatgaaaatgtcccttacaattc
ccttcctctgttgcagcgaccaaggtggagatttcttgactgaggttgaa
agaccccaaaatgaaaagatctcagtcaaccagtcactttcaaggatgct
tacctccaagagaagtctctcagatccatggggtctttgcatgagaaaga
atgagcttttactgtgatactgtgtgagtgtccattctttaccataactg
gatttatctcctctaaaacacgggctgagacattcattattccctcagag
accttacgagtaaattaccatggaggctgcttttaaaccacacatgggta
aaagggatttaaatatgtccagactgacaccaaaatttagactattttcc
ggtcttcaaattgttctacttacagattttccaagataaagccagaaagg
ttaagggttctctcagccccaaca
aatctccaggagccatatggtataagaagagagaaccaactccccaaacc
tccacatggcatgtggtgacatgcatgtgccctgcacaggtatgaggagc
tgggcctgcgctggagtcagacatggagtgtgtgtgtgtgtgtgtgtgtg
tgtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_68579350_68580532
seq2: B6Ng01-018P11.b_47_1220

seq1  GAATTCTATGCATCGGATCCTTCCATTAAAATGAGCATAGCATTCCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCATCGGATCCTTCCATTAAAATGAGCATAGCATTCCCATT  50

seq1  AGTAGACCTAATAAGAGCATCACCAAAGCAAATAGGTAACTGTAAAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACCTAATAAGAGCATCACCAAAGCAAATAGGTAACTGTAAAGTAA  100

seq1  ATGTCACTACTCCTGTTTTTATGTCTGATGTGAACTCTAAGAATGCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTACTCCTGTTTTTATGTCTGATGTGAACTCTAAGAATGCACCA  150

seq1  TGCAAAGTGATTCTTCTGGACCTTAAAAAAAATAAATACTCAAAAAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTGATTCTTCTGGACCTTAAAAAAAATAAATACTCAAAAAACAG  200

seq1  TAGTTAGGCAGGTTTCATCCTCAACGTGAGTCTGGCCATGTTTGAGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGGCAGGTTTCATCCTCAACGTGAGTCTGGCCATGTTTGAGATGC  250

seq1  AGTCACTACTTAGGGCAATCACTGCAGCACACCATGAAATGACCAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTACTTAGGGCAATCACTGCAGCACACCATGAAATGACCAAAATT  300

seq1  GGCTGCTTCTTTGGAGGCCATTCCCAAGTGGAGATGTTAGAGAAGGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTTCTTTGGAGGCCATTCCCAAGTGGAGATGTTAGAGAAGGAGGT  350

seq1  AGGGAGACAACTTTCAGAGGAAAGTAGAAGAACAAAAGATGACATCGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACAACTTTCAGAGGAAAGTAGAAGAACAAAAGATGACATCGTGA  400

seq1  AAATGCACATGGCCACAATGTGTCTAGACCCAACGTTTGAGTTATCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACATGGCCACAATGTGTCTAGACCCAACGTTTGAGTTATCTTTG  450

seq1  AGACTCAAGGATTTCCCAGAGGCCAATAATCCAGATGTAAAGGTTAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAAGGATTTCCCAGAGGCCAATAATCCAGATGTAAAGGTTAGCAT  500

seq1  TTATACATGTGTCAAGTTTCCTTTGAGCTCTGAGATAAATCCTTTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATGTGTCAAGTTTCCTTTGAGCTCTGAGATAAATCCTTTGCTCA  550

seq1  TAAAGCCTTGGTTTCAAGAGAATAATAGATACAGCTAGCCTATATTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTTGGTTTCAAGAGAATAATAGATACAGCTAGCCTATATTTGTC  600

seq1  TCAGGGTTTTCAGTCCTTCCAAGGCATACATAATATCTCATCTCCTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTTTCAGTCCTTCCAAGGCATACATAATATCTCATCTCCTCATG  650

seq1  GACTTGGGACTGTGTGGCCTAGCATTGCCCTATGAAATGTAATCGGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGGACTGTGTGGCCTAGCATTGCCCTATGAAATGTAATCGGGATT  700

seq1  AATGGACTTCACTTCTCAAAAACGAAGAATGAAAATGTCCCTTACAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACTTCACTTCTCAAAAACGAAGAATGAAAATGTCCCTTACAATTC  750

seq1  CCTTCCTCTGTTGCAGCGACCAAGGTGGAGATTTCTTGACTGAGGTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCTGTTGCAGCGACCAAGGTGGAGATTTCTTGACTGAGGTTGAA  800

seq1  AGACCCCAAAATGAAAAGATCTCAGTCAACCAGTCAC-TTCAAGGATGCT  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGACCCCAAAATGAAAAGATCTCAGTCAACCAGTCACTTTCAAGGATGCT  850

seq1  TACCTCCAAGAGAAGTCTCTCAGATCCATGGGGTCTTTGCATGAGAAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACCTCCAAGAGAAGTCTCTCAGATCCATGGGGTCTTTGCATGAGAAAG-  899

seq1  AATGAGCTTTTACTGTGATACTGTGTGAGTGTCCATTCCTTTACCATAAC  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATGAGCTTTTACTGTGATACTGTGTGAGTGTCCATT-CTTTACCATAAC  948

seq1  TGGATTTATCTCCTTCTAAAACACGGGCTGAGACAATTCATTATTCCCTC  999
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  TGGATTTATCTCC-TCTAAAACACGGGCTGAGAC-ATTCATTATTCCCTC  996

seq1  AGAGACCCTACGAGTAAATTACCAT-GAGGCTGCTTTAAAACCACACATG  1048
      ||||||| ||||||||||||||||| ||||||||||| ||||||||||||
seq2  AGAGACCTTACGAGTAAATTACCATGGAGGCTGCTTTTAAACCACACATG  1046

seq1  GGTAAAAAGGGAATTAAAATAGTCCAGAATGACACCAAAATTTAGACTAT  1098
      ||| |||||||| |||||   ||||||| |||||||||||||||||||| 
seq2  GGT-AAAAGGGATTTAAATATGTCCAGACTGACACCAAAATTTAGACTA-  1094

seq1  TTTTTCAGTCCTTCAAATTGTTCTACCTTACAGATTTTTCACAAGATAAA  1148
       ||||| |  ||||||||||||||| ||||||||||||   |||||||||
seq2  -TTTTCCGGTCTTCAAATTGTTCTA-CTTACAGATTTT--CCAAGATAAA  1140

seq1  AGCAGAAAGGTTAAATGTCTCCCTCAGCCCCAACA  1183
        ||||||||||||  || || |||||||||||||
seq2  GCCAGAAAGGTTAAGGGT-TCTCTCAGCCCCAACA  1174

seq1: chr10_68714123_68714280
seq2: B6Ng01-018P11.g_76_233 (reverse)

seq1  CCCCCACACACACACACACACACACACACACTCCATGTCTGACTCCAGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACACACACACACACACACACACACACTCCATGTCTGACTCCAGCG  50

seq1  CAGGCCCAGCTCCTCATACCTGTGCAGGGCACATGCATGTCACCACATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCAGCTCCTCATACCTGTGCAGGGCACATGCATGTCACCACATGC  100

seq1  CATGTGGAGGTTTGGGGAGTTGGTTCTCTCTTCTTATACCATATGGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGAGGTTTGGGGAGTTGGTTCTCTCTTCTTATACCATATGGCTCC  150

seq1  TGGAGATT  158
      ||||||||
seq2  TGGAGATT  158