BAC Information

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BAC

Clone NameB6Ng01-021O19
Chromosome10 (Build37)
Map Location 117,632,899 - 117,809,767
singlet/doubletdoublet
Overlap geneIl22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216
Upstream geneYeats4, 9530003J23Rik, Lyzs, Lyz, Cpsf6, LOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b, Mdm1
Downstream geneIfng, LOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021O19.bB6Ng01-021O19.g
ACCDH854300DH854301
length1,0571,028
definitionDH854300|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O19, 5' end.DH854301|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,632,899 - 117,633,949)(117,808,731 - 117,809,767)
sequence
gaattcactctgagttcttattgtgtttgctttttacttagactggcaaa
cacagtagggactgacaaattataaactggagggcaagggtcaaagagaa
tgtttaaggggatattggaggctcaagttacgaggaagatgaacaaagag
acagaaaaatgattaagtggtctccacctaaagcagagcagtccgtacgc
cttgctatgacttgggattgggaacaccgaacttacataattattagaag
tcagatgatatgcgagacttatttactccagaggacttttttcaataatg
gatcctgagtagacaggagatgactgaccaggcaaaatgcagagagaatc
catcttcagctagactgaatgcagaaagaattcactaaaggcgcaggtta
ttaaagagtcatataagtaaagatgaataattcaagcaggccccctcctt
tatggatgctaatgaggaagcagaggattaaggtgtccaggaccaagtgg
gtaaaagaggtcactaataccataggtgaccccttgtctctttaacaaag
aatcaaggtctaggaaagtctccataggatgctctggagaggaagataag
gaaagtctggaagatgttccaatatattgtcttctgtcttacagctgggt
agacatcagccaaggctcccctagactctgtccttacccattagcctctc
ccagatccacaggactgaggaaagaagcagctgctatttttctgcattca
agcttagactaggtgcttatgggaaaaagtggcctctaatggggaaatat
cagtgagagcaacccactgtcctacagctttgttgtctttgtagtaagga
gcttatttatttaagccttttaggctgcctccatttttacagacataaac
tcatcaattgtggtgtcattataagcagttggttgtgtcggtctagccag
ttgagggtcccaggttagatactggtaaaggcaggtagcttctgtttgtc
tttgagctccctagatcatggtggctgacagtcactcagctgtgagccta
tacagtg
gaattccctctttattcaaataggaaggatagaaagggtgatgggagtct
gaactggctttggatgcccacaaaataaggcacaactgtcctcaggctaa
cctttagggagactcccctattgacagccttgtgtccacgtatataatta
aaatcagatgcattatgggaaagaacatatgtagtaaaaaactgatcaca
tgacctaatctatcagtcaaaacaaagcgccaccctcgctctgtccccta
gcaaccaaactcctcttcgatgccataaagagaaaccccaaaagataatc
aaggcccctgaagatcttcagtcacgtggcctgccgtccctacagcagat
tctgatcttttctactggtttgctttaggtaaaagttcctcactgcttca
aagtctgtatgggcttttatttcattctagaataaaatgtcaaggacacg
atatgctgatatcatcgtctgaattgaaaataaaataataaattaaaatg
tattttcatctttattaagtcatccgttttgatccattctggtccccatg
acaaactgtcgatggcaataaaaactcaacatggtcaaaaaatattttaa
aatcgcatacgctagaaaaatgtctataaaaatatagacataatgctacc
tagcggaacccagaggaggagggagggatgcaaagaggcaagggaggagc
catgagcggatagcctcagcatacactgacgttttatgaaaatgccctta
tccatacgaaagtgtaaaaataaaaacatcaattcttcctattagcttca
aagcatggagtcaaaataaaatcccactggcttgcagcatctgttgggta
ttggttcttgacaaggttttttggaccggggcagagcagaatgccaaatg
ttggtgttgacatgcttcagagtgagcgtacagtttatgaccggtctgta
tggttcttttctgttactacgttaagtgtgagaacagacatgctgggcag
cattgttgacgcaaccctatctgctgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_117632899_117633949
seq2: B6Ng01-021O19.b_46_1102

seq1  GAATTCACTCTGAGTTCTTATTGTGTTTGCTTTTTACTTAGACTGGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGAGTTCTTATTGTGTTTGCTTTTTACTTAGACTGGCAAA  50

seq1  CACAGTAGGGACTGACAAATTATAAACTGGAGGGCAAGGGTCAAAGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAGGGACTGACAAATTATAAACTGGAGGGCAAGGGTCAAAGAGAA  100

seq1  TGTTTAAGGGGATATTGGAGGCTCAAGTTACGAGGAAGATGAACAAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAGGGGATATTGGAGGCTCAAGTTACGAGGAAGATGAACAAAGAG  150

seq1  ACAGAAAAATGATTAAGTGGTCTCCACCTAAAGCAGAGCAGTCCGTACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAATGATTAAGTGGTCTCCACCTAAAGCAGAGCAGTCCGTACGC  200

seq1  CTTGCTATGACTTGGGATTGGGAACACCGAACTTACATAATTATTAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATGACTTGGGATTGGGAACACCGAACTTACATAATTATTAGAAG  250

seq1  TCAGATGATATGCGAGACTTATTTACTCCAGAGGACTTTTTTCAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGATATGCGAGACTTATTTACTCCAGAGGACTTTTTTCAATAATG  300

seq1  GATCCTGAGTAGACAGGAGATGACTGACCAGGCAAAATGCAGAGAGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGAGTAGACAGGAGATGACTGACCAGGCAAAATGCAGAGAGAATC  350

seq1  CATCTTCAGCTAGACTGAATGCAGAAAGAATTCACTAAAGGCGCAGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCAGCTAGACTGAATGCAGAAAGAATTCACTAAAGGCGCAGGTTA  400

seq1  TTAAAGAGTCATATAAGTAAAGATGAATAATTCAAGCAGGCCCCCTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGTCATATAAGTAAAGATGAATAATTCAAGCAGGCCCCCTCCTT  450

seq1  TATGGATGCTAATGAGGAAGCAGAGGATTAAGGTGTCCAGGACCAAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATGCTAATGAGGAAGCAGAGGATTAAGGTGTCCAGGACCAAGTGG  500

seq1  GTAAAAGAGGTCACTAATACCATAGGTGACCCCTTGTCTCTTTAACAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGAGGTCACTAATACCATAGGTGACCCCTTGTCTCTTTAACAAAG  550

seq1  AATCAAGGTCTAGGAAAGTCTCCATAGGATGCTCTGGAGAGGAAGATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGGTCTAGGAAAGTCTCCATAGGATGCTCTGGAGAGGAAGATAAG  600

seq1  GAAAGTCTGGAAGATGTTCCAATATATTGTCTTCTGTCTTACAGCTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTGGAAGATGTTCCAATATATTGTCTTCTGTCTTACAGCTGGGT  650

seq1  AGACATCAGCCAAGGCTCCCCTAGACTCTGTCCTTACCCATTAGCCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCAGCCAAGGCTCCCCTAGACTCTGTCCTTACCCATTAGCCTCTC  700

seq1  CCAGATCCACAGGACTGAGGAAAGAAGCAGCTGCTATTTTTCTGCATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCCACAGGACTGAGGAAAGAAGCAGCTGCTATTTTTCTGCATTCA  750

seq1  AGCTTAGACTAGGTGCTTATGGGAAAAAGTGGCCTCTAATGGGGAAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGACTAGGTGCTTATGGGAAAAAGTGGCCTCTAATGGGGAAATAT  800

seq1  CAGTGAGAGCAACCCACTGTCCTACAGC-TTGGTGTCTTTGTAGTAAGGA  849
      |||||||||||||||||||||||||||| ||| |||||||||||||||||
seq2  CAGTGAGAGCAACCCACTGTCCTACAGCTTTGTTGTCTTTGTAGTAAGGA  850

seq1  GCTTATTTA-TTAAGCCTTTTAGGCTGCCTCCA-TTTTACAGACATAAAC  897
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  GCTTATTTATTTAAGCCTTTTAGGCTGCCTCCATTTTTACAGACATAAAC  900

seq1  TCATCAATTGTTGGTGTCA-TATAAGCAGTTGGTTGTGTTCGGTCTAGCC  946
      |||||||||| |||||||| |||||||||||||||||| |||||||||||
seq2  TCATCAATTG-TGGTGTCATTATAAGCAGTTGGTTGTG-TCGGTCTAGCC  948

seq1  AG-TGAGGGTCCCAGGTTAGATACTGGTAAAGGCAGGTAGC-TCTG-TTG  993
      || |||||||||||||||||||||||||||||||||||||| |||| |||
seq2  AGTTGAGGGTCCCAGGTTAGATACTGGTAAAGGCAGGTAGCTTCTGTTTG  998

seq1  TC-TTGAGCTCCCTTGATCATGGGTGCTGACAGTCACTCAGCCGTGAGCC  1042
      || ||||||||||| ||||||||  ||||||||||||||||| |||||||
seq2  TCTTTGAGCTCCCTAGATCATGGTGGCTGACAGTCACTCAGCTGTGAGCC  1048

seq1  TATACAGTG  1051
      |||||||||
seq2  TATACAGTG  1057

seq1: chr10_117808731_117809767
seq2: B6Ng01-021O19.g_67_1094 (reverse)

seq1  GTCAGCAGATAGGGCTGCGTCCACACTGCTGCCCAGCCTGTCCTGTTCTC  50
      |||||||||||||| |||||| ||| ||||||||||| ||| ||||||||
seq2  GTCAGCAGATAGGGTTGCGTCAACAATGCTGCCCAGCATGT-CTGTTCTC  49

seq1  AACACTTAACGTAGGTAACAGAAAAGAACCATACAGACCGGTTCCTTAAC  100
       |||||||||||| ||||||||||||||||||||||||||||  | ||| 
seq2  -ACACTTAACGTA-GTAACAGAAAAGAACCATACAGACCGGT--CATAAA  95

seq1  CTGTACGCTTCACTCTTGAAGCCATGTCAACACCAAACATTTGGCCTTCT  150
      |||||||| |||||| ||||| |||||||||||| |||||||||| ||||
seq2  CTGTACGC-TCACTC-TGAAG-CATGTCAACACC-AACATTTGGCATTCT  141

seq1  GCTCTGCCCCGGTCCAAAAAACCTTGTCAAGAACCAATATCCCAACAGAT  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTCTGCCCCGGTCCAAAAAACCTTGTCAAGAACCAATA-CCCAACAGAT  190

seq1  GCTGCAAGCCAGTGGGATTTTATTTTGACTCCATGCTTTGAAGCTAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAGCCAGTGGGATTTTATTTTGACTCCATGCTTTGAAGCTAATAG  240

seq1  GAAGAATTGATGTTTTTATTTTTACACTTTCGTATGGATAAGGGCATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTGATGTTTTTATTTTTACACTTTCGTATGGATAAGGGCATTTT  290

seq1  CATAAAACGTCAGTGTATGCTGAGGCTATCCGCTCATGGCTCCTCCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACGTCAGTGTATGCTGAGGCTATCCGCTCATGGCTCCTCCCTTG  340

seq1  CCTCTTTGCATCCCTCCCTCCTCCTCTGGGTTCCGCTAGGTAGCATTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTGCATCCCTCCCTCCTCCTCTGGGTTCCGCTAGGTAGCATTATG  390

seq1  TCTATATTTTTATAGACATTTTTCTAGCGTATGCGATTTT-AAATATTTT  449
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTATATTTTTATAGACATTTTTCTAGCGTATGCGATTTTAAAATATTTT  440

seq1  TTGACCATGTTGAGTTTTTATTGCCATCGACAGTTTGTCATGGGGACCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCATGTTGAGTTTTTATTGCCATCGACAGTTTGTCATGGGGACCAG  490

seq1  AATGGATCAAAACGGATGACTTAATAAAGATGAAAATACATTTTAATTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATCAAAACGGATGACTTAATAAAGATGAAAATACATTTTAATTTA  540

seq1  TTATTTTATTTTCAATTCAGACGATGATATCAGCATATCGTGTCCTTGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTTTCAATTCAGACGATGATATCAGCATATCGTGTCCTTGAC  590

seq1  ATTTTATTCTAGAATGAAATAAAAGCCCATACAGACTTTGAAGCAGTGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTCTAGAATGAAATAAAAGCCCATACAGACTTTGAAGCAGTGAG  640

seq1  GAACTTTTACCTAAAGCAAACCAGTAGAAAAGATCAGAATCTGCTGTAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTACCTAAAGCAAACCAGTAGAAAAGATCAGAATCTGCTGTAGG  690

seq1  GACGGCAGGCCACGTGACTGAAGATCTTCAGGGGCCTTGATTATCTTTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGCAGGCCACGTGACTGAAGATCTTCAGGGGCCTTGATTATCTTTTG  740

seq1  GGGTTTCTCTTTATGGCATCGAAGAGGAGTTTGGTTGCTAGGGGACAGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTTTATGGCATCGAAGAGGAGTTTGGTTGCTAGGGGACAGAG  790

seq1  CGAGGGTGGCGCTTTGTTTTGACTGATAGATTAGGTCATGTGATCAGTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGGTGGCGCTTTGTTTTGACTGATAGATTAGGTCATGTGATCAGTTT  840

seq1  TTTACTACATATGTTCTTTCCCATAATGCATCTGATTTTAATTATATACG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTACATATGTTCTTTCCCATAATGCATCTGATTTTAATTATATACG  890

seq1  TGGACACAAGGCTGTCAATAGGGGAGTCTCCCTAAAGGTTAGCCTGAGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACAAGGCTGTCAATAGGGGAGTCTCCCTAAAGGTTAGCCTGAGGA  940

seq1  CAGTTGTGCCTTATTTTGTGGGCATCCAAAGCCAGTTCAGACTCCCATCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTGCCTTATTTTGTGGGCATCCAAAGCCAGTTCAGACTCCCATCA  990

seq1  CCCTTTCTATCCTTCCTATTTGAATAAAGAGGGAATTC  1037
      ||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTATCCTTCCTATTTGAATAAAGAGGGAATTC  1028