BAC Information

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BAC

Clone NameB6Ng01-022P20
Chromosome10 (Build37)
Map Location 56,789,956 - 56,791,158
singlet/doubletsinglet
Overlap genenone
Upstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355, LOC100042628, EG629739
Downstream geneLOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022P20.bB6Ng01-022P20.g
ACCDH855037DH855038
length1,1241,196
definitionDH855037|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P20, 5' end.DH855038|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctcagtaccccatttttaaattgggttatttgggt
tgctatgtctaaattgttgaattctatatattttaaatattagccctctg
tcatagttaggttttctacaactgtgaagaggtactatgaccaaggcaac
tcttgtaaaggacaacatttaattggggctaccttacaggtttaggctat
tctcatcaaggcaggaagcatggcagcatccatgaaggcaccatgatgga
ggagctaagagttgtacatcttgttctgaaggaaaataagagaagactgt
ctcagggacagctaggaagagggtaaccaatctcaccccatagtggcata
cttcttccaacaagggcatccttcctaatagtgccactccctgggccaag
gatattcaaaccaccacaccctctgacagatgtagacttgaagatttttt
tttaattctataggctatttttttgtcctattgatagtgtcctttgcctt
aaagaaactttcgagtttcacgaggtctcatttattaattgttgatctta
gtgctttagctgtggatgttctcttaaaaaatgtcatggaagaggaatcc
ccaatttctgatctcatccaaataaaatctgcaaaaagaaaaaaaaaaaa
aaaaaaaatgtcaaggctatttgccactttctcttctattaggtttaatg
aatctggttttacattgaagtctttaatctacaaggacttgagttttgtg
tagggtgataaatatggatctgttttcttcaacatgcagacatccagtta
gaacagcaacatttgttgaagatgctttccttttccattgaatagtttgt
ctctttgtcaaatcaagtgtccatagaatgtggattatttctggatcttc
aatttgattttgctgaccaactttctgtttctataccaaaacatgtagtt
ttattactattgctccgatagtacgggctgaagtcaggatgtgatacctc
cagaagttctgtatttgtacaggattggttactatcttgaattttgtttc
atttaagttgagaaatgtttttgcaagtcgtgaaaggtagtgtgttgact
tggatggaaatgcatgtaatccga
gaattctttctacgtgtgtctgttgctgctaaggtcttcctttgctgcca
tcagactgcagcttctctagttttctgagtgaactcaataccagaatctc
tatcctggtttttgaactgaacagtcgtatcatataagccattgaagtaa
tctccattttataatcggcacacattctgttatttctgttcctctcgaga
accttgcctaatacacagacatttttctgaaaacacagcctgccatagca
ctttcacaaggctcattttcccatggtccagatatatgattatattacag
ctaacaatccctgatcttattaatctgtaacactgaagagaggagaaagc
tttagctacagttcattagccagtgtccccaaagacatcatatctatctg
agaatgggacagggctaagatactgaacatacttcctttcagatagagca
gaggttaatgttccatagcaattctgaattccagaggcacagggtagcag
gtttctgactagcctgggcatcaggttgccatcaagtctcatgggcttct
ctaagtgacccttctgtttgaaaaaaatttaacctttgtctgaggcaaaa
tctgatttaaagattgtgtcttatccagagatgttataaaataaaaatct
tcttttcagtttgtactctctgcgcttctttccctcaaagctggaattgt
ctgtctagacaacttcagcttcagtttttaaaatcagtgtatactggcat
tcattatagtatactggaaaaaaatgccctaaaacaaagccttctttact
atagtcattttaagcctgaagaaaacactacccctattctaaatgctaag
catgtgcttggaatgccatcagaccctttgctgatttgaagtgactctga
gtgactttctcaagtcttttgggctttatttctatactttactatagtga
cagtggcctgaacaaatctttgttcagagttatttctactattcaacatt
ttattttctaaatggcttgaggaaaatatttaatactaaattagaatttc
tagcttctgcttctggtgttaataaaaaatgaatagacggcttccgttct
gaatcaggaaatccctcctggtccctatgctcggaacttagccaaaaatc
cgtctctcctcgcggagaaaggaatagctggcacgtccgaagcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56789956_56791158
seq2: B6Ng01-022P20.g_69_1264

seq1  GAATTCTTTCTACGTGTGTCTGTTGCTGCTAAGGTCTTCCTTTGCTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTACGTGTGTCTGTTGCTGCTAAGGTCTTCCTTTGCTGCCA  50

seq1  TCAGACTGCAGCTTCTCTAGTTTTCTGAGTGAACTCAATACCAGAATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGCAGCTTCTCTAGTTTTCTGAGTGAACTCAATACCAGAATCTC  100

seq1  TATCCTGGTTTTTGAACTGAACAGTCGTATCATATAAGCCATTGAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGGTTTTTGAACTGAACAGTCGTATCATATAAGCCATTGAAGTAA  150

seq1  TCTCCATTTTATAATCGGCACACATTCTGTTATTTCTGTTCCTCTCGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTTTATAATCGGCACACATTCTGTTATTTCTGTTCCTCTCGAGA  200

seq1  ACCTTGCCTAATACACAGACATTTTTCTGAAAACACAGCCTGCCATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCCTAATACACAGACATTTTTCTGAAAACACAGCCTGCCATAGCA  250

seq1  CTTTCACAAGGCTCATTTTCCCATGGTCCAGATATATGATTATATTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACAAGGCTCATTTTCCCATGGTCCAGATATATGATTATATTACAG  300

seq1  CTAACAATCCCTGATCTTATTAATCTGTAACACTGAAGAGAGGAGAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAATCCCTGATCTTATTAATCTGTAACACTGAAGAGAGGAGAAAGC  350

seq1  TTTAGCTACAGTTCATTAGCCAGTGTCCCCAAAGACATCATATCTATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTACAGTTCATTAGCCAGTGTCCCCAAAGACATCATATCTATCTG  400

seq1  AGAATGGGACAGGGCTAAGATACTGAACATACTTCCTTTCAGATAGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGACAGGGCTAAGATACTGAACATACTTCCTTTCAGATAGAGCA  450

seq1  GAGGTTAATGTTCCATAGCAATTCTGAATTCCAGAGGCACAGGGTAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAATGTTCCATAGCAATTCTGAATTCCAGAGGCACAGGGTAGCAG  500

seq1  GTTTCTGACTAGCCTGGGCATCAGGTTGCCATCAAGTCTCATGGGCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGACTAGCCTGGGCATCAGGTTGCCATCAAGTCTCATGGGCTTCT  550

seq1  CTAAGTGACCCTTCTGTTTGAAAAAAATTTAACCTTTGTCTGAGGCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGACCCTTCTGTTTGAAAAAAATTTAACCTTTGTCTGAGGCAAAA  600

seq1  TCTGATTTAAAGATTGTGTCTTATCCAGAGATGTTATAAAATAAAAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTAAAGATTGTGTCTTATCCAGAGATGTTATAAAATAAAAATCT  650

seq1  TCTTTTCAGTTTGTACTCTCTGCGCTTCTTTCCCTCAAAGCTGGAATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAGTTTGTACTCTCTGCGCTTCTTTCCCTCAAAGCTGGAATTGT  700

seq1  CTGTCTAGACAACTTCAGCTTCAGTTTTTAAAATCAGTGTATACTGGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAGACAACTTCAGCTTCAGTTTTTAAAATCAGTGTATACTGGCAT  750

seq1  TCATTATAGTATACTGGAAAAAAATGCCCTAAAACAAAGCCTTCTTTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAGTATACTGGAAAAAAATGCCCTAAAACAAAGCCTTCTTTACT  800

seq1  ATAGTCATTTTAAGCCTGAAGAAAAACACTACCCCTAATTCTAAATGCTA  850
      ||||||||||||||||||||| |||||||||||||| |||||||||||||
seq2  ATAGTCATTTTAAGCCTGAAG-AAAACACTACCCCT-ATTCTAAATGCTA  848

seq1  AGCATGTGCTTGGAATGCCATCAGACCCTTTGCTGATTTGAAGTGACTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGCTTGGAATGCCATCAGACCCTTTGCTGATTTGAAGTGACTCT  898

seq1  GAGTGACTTTCTCAAGTCTTTTGGGCTTTATTTCTATACTTTTACTTATA  950
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  GAGTGACTTTCTCAAGTCTTTTGGGCTTTATTTCTATAC-TTTAC-TATA  946

seq1  GTGACAGTGGCCTGAACAAATCTTTGTTCAGAGTTATTTCTTAACTATTA  1000
      |||||||||||||||||||||||||||||||||||||||||  |||||| 
seq2  GTGACAGTGGCCTGAACAAATCTTTGTTCAGAGTTATTTCT--ACTATTC  994

seq1  AACA-TTTATTTTCTAAAATGGC-TGAGGAAAAATATTAATTACTAAATT  1048
      |||| |||||||||| ||||||| ||||| |||||||| | |||||||||
seq2  AACATTTTATTTTCT-AAATGGCTTGAGG-AAAATATTTAATACTAAATT  1042

seq1  AGAATTTCTAGC-TCTGCTTTCTGTGTGTAGATAAAAATGTGATTAGACA  1097
      |||||||||||| ||||| ||||| ||||  |||||||  ||| ||||| 
seq2  AGAATTTCTAGCTTCTGC-TTCTG-GTGTTAATAAAAA-ATGAATAGACG  1089

seq1  GCTTCCTGTTCTTGATTTCATGTAATTCCCTTCGTGTCACTTATCGTTCT  1147
      |||||| |||||  |  ||| | || ||||| |  ||| ||     | ||
seq2  GCTTCC-GTTCTGAA--TCA-GGAAATCCCTCCTGGTCCCT----ATGCT  1131

seq1  GGGATCTATAGCTAAAATAAACTCTTTCTTCCAATGAGAGAAAGGAATA-  1196
       ||| || |||| ||||     ||| || ||      |||||||||||| 
seq2  CGGAACT-TAGCCAAAAATCCGTCTCTCCTC---GCGGAGAAAGGAATAG  1177

seq1  ------------AAGCAAG  1203
                  |||||||
seq2  CTGGCACGTCCGAAGCAAG  1196