BAC Information

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BAC

Clone NameB6Ng01-023D19
Chromosome10 (Build37)
Map Location 129,464,171 - 129,613,071
singlet/doubletdoublet
Overlap geneOlfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825
Upstream geneEG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820
Downstream geneOlfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023D19.bB6Ng01-023D19.g
ACCDH855211DH855212
length6431,155
definitionDH855211|Mus musculus domesticus DNA, BAC clone: B6Ng01-023D19, 5' end.DH855212|Mus musculus domesticus DNA, BAC clone: B6Ng01-023D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,464,171 - 129,464,810)(129,611,949 - 129,613,071)
sequence
gaattcccaatggaggagctttagaagggaatgaaggagctgagggaatt
tgcagccccattgagtgtcaccaggccagaacacccacacatacccccga
gctcccgggggctggaccaccaaccaaagagtacacatggagggacccat
ggcttcagatgcatatgtggcaaaggatgaccttattggacatcagtggg
aggagaggcccttgtacacccgagggtgttcgatgcctcagggtaggggt
atgcgacggtaagaagacaggagtgggtgggtggagtaataaccctcata
taggcaggaggaggggagttggaatacgggattgccctaggggagaccta
gaaaggggaaaacatttgaaatgtaaataaggaaaatacccaataataat
gatgatgatgatgatattaataataaggagagagagagaaagagagagag
agagagagagagagagagagagagaaagaaagagagagagagagatagag
agagaaagagagaaagaaagatttaagaatgatagaaacattgaaagaat
gtaagattgattgattgcttaatcaatcattgatatgatagcgacagaac
tgaaatggatataaaaggataatatctcctatggtgaaatttt
gaattccactcaacccagacagattaagtagggactgcaagtacattttt
atgctctaacatgttagacttagaaagataatcagccatcattcagccag
agtaagctacaagagacaactggaaggagatggagagaaataaatttata
ttttaaaaagaattttgattcatcttttaatttggttgttttcaatttct
tagatctgttcttttttgttttgttttgtttttcgagacagggtttctct
gtatagctctggttgtcctggaactcactttgtagaccaggctggcctcg
aactcagaaatctgcctgcctctgcctcctgagtgctgggattaaaggca
tgcgccaccacacctggcttcttagatttgatcttaaattttttttcttt
ctctgtgctgatttttattgtttttgccttacatgttgactcttctatcc
catatactttccctcttattcttatgttcctctagctctattctcctctt
ctttctcctctttctcctccttctcttcttctttttgtcttgggaatgtg
ttgctaaacctaggttgttcggtctgccagagcccagtcttagacctaaa
acctcaaacaacacaaccacatgtctagcaccaactggaaggcatagact
gataataatttattcctcgtgttaaaaaatataccaaccatctgtaatct
tagcaaagtgccacggactgtattgcatcccactcgaccggcaagaaaga
cgcaacaaaccggaatcttctgcggcaaaagctttattgcttacttctta
ggaagaccacgaacagggaaaatggcgctgcttatatagcccacagcgtg
acgtttcagcacctgatatggcgtgacagctcctgattcgttgctcaccc
atcaccccactattacgccctgagagtgggcagtgtgactaggagtgagt
tcactcctcgcgcctgagtataaggcttgtttactagttaggccacagcg
gaggccagcgccattttataatggcgacagaatgggcataatctcggcgt
aatgggggtgacaaacaaacaaaacagggagtgtgcgtggatatgaatgt
tatttgtcaattgagcatacaaactttatacaagaagaaatagggaagta
ggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129464171_129464810
seq2: B6Ng01-023D19.b_31_673

seq1  GAATTCCCAATGGAGGAGCTTTAGAAGGGAATGAAGGAGCTGAGGGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAATGGAGGAGCTTTAGAAGGGAATGAAGGAGCTGAGGGAATT  50

seq1  TGCAGCCCCATTGAGTGTCACCAGGCCAGAACACCCACACATACCCCCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCCCATTGAGTGTCACCAGGCCAGAACACCCACACATACCCCCGA  100

seq1  GCTCCCGGGGGCTGGACCACCAACCAAAGAGTACACATGGAGGGACCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCGGGGGCTGGACCACCAACCAAAGAGTACACATGGAGGGACCCAT  150

seq1  GGCTTCAGATGCATATGTGGCAAAGGATGACCTTATTGGACATCAGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAGATGCATATGTGGCAAAGGATGACCTTATTGGACATCAGTGGG  200

seq1  AGGAGAGGCCCTTGTACACCCGAGGGTGTTCGATGCCTCAGGGTAGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGCCCTTGTACACCCGAGGGTGTTCGATGCCTCAGGGTAGGGGT  250

seq1  ATGCGACGGTAAGAAGACAGGAGTGGGTGGGTGGAGTAATAACCCTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGACGGTAAGAAGACAGGAGTGGGTGGGTGGAGTAATAACCCTCATA  300

seq1  TAGGCAGGAGGAGGGGAGTTGGAATACGGGATTGCCCTAGGGGAGACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGGAGGAGGGGAGTTGGAATACGGGATTGCCCTAGGGGAGACCTA  350

seq1  GAAAGGGGAAAACATTTGAAATGTAAATAAGGAAAATACCCAATAATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGAAAACATTTGAAATGTAAATAAGGAAAATACCCAATAATAAT  400

seq1  GATGATGATGATGATATTAATAATAAGGAGAGAGAGAGAAAGAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGATGATGATATTAATAATAAGGAGAGAGAGAGAAAGAGAGAGAG  450

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGATAGAG  500

seq1  AGAGAAAGAGAGAAAGAAAGA---AAGAAAGAAAGAAAGAAAGAAAGAAA  547
      |||||||||||||||||||||   ||||| || ||||| |  ||||||| 
seq2  AGAGAAAGAGAGAAAGAAAGATTTAAGAATGATAGAAACATTGAAAGAAT  550

seq1  GAAAGAAAGAAAGAAAG---AAAGAAAGAAAGAAAGGAGAGAGAAAGAAA  594
      | ||||  ||  ||  |   ||  ||  |  || | || || || || ||
seq2  GTAAGATTGATTGATTGCTTAATCAATCATTGATATGATAGCGACAG-AA  599

seq1  GTGAAATGGATATAAAAGGAGTAATAATCACCAATGGTGAAATTTT  640
       ||||||||||||||||||| |||| ||| || |||||||||||||
seq2  CTGAAATGGATATAAAAGGA-TAAT-ATCTCCTATGGTGAAATTTT  643

seq1: chr10_129611949_129613071
seq2: B6Ng01-023D19.g_104_1223 (reverse)

seq1  TCACCTAACTTCCCTATTTTCTTC-TGTATAAAATGTTTTGATGCTCAAT  49
      |||||| ||||||||| ||||||| ||||||||  ||||  |||||||| 
seq2  TCACCT-ACTTCCCTA-TTTCTTCTTGTATAAA--GTTTGTATGCTCAA-  45

seq1  TTGACAAATTACATTCATATCCA-GCACACTCCCTTGTGTCTTGTCTGTT  98
      ||||||||| ||||||||||||| ||||||||||   ||| |||| ||||
seq2  TTGACAAATAACATTCATATCCACGCACACTCCC---TGTTTTGTTTGTT  92

seq1  TGTCA-CCCCATTATCGCCGAGTCTATGCCCA-TCTGTCGCCATTATAAA  146
      ||||| |||||||| |||||||  |||||||| |||||||||||||||||
seq2  TGTCACCCCCATTA-CGCCGAGATTATGCCCATTCTGTCGCCATTATAAA  141

seq1  ATGGCGCTGGCCTCCGCTGT-GCCTAACTAGTAAACAAGCCTTGTACTCA  195
      |||||||||||||||||||| |||||||||||||||||||||| ||||||
seq2  ATGGCGCTGGCCTCCGCTGTGGCCTAACTAGTAAACAAGCCTTATACTCA  191

seq1  GGCGCGA-GAGTGAACTCACTCCTAGTCACACTGCCCACTCTCAGGGCGT  244
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCGAGGAGTGAACTCACTCCTAGTCACACTGCCCACTCTCAGGGCGT  241

seq1  AATAGTGGGGTGATGGGTGAGCAACGAATCAGGAGCTGTCACGCCATATC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGGGGTGATGGGTGAGCAACGAATCAGGAGCTGTCACGCCATATC  291

seq1  AGGTGCTGAAACGTCACGCTGTGGGCTATATAAGCAGCGCCATTTTCCCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTGAAACGTCACGCTGTGGGCTATATAAGCAGCGCCATTTTCCCT  341

seq1  GTTCGTGGTCTTCCTAAGAAGTAAGCAATAAAGCTTTTGCCGCAGAAGAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTGGTCTTCCTAAGAAGTAAGCAATAAAGCTTTTGCCGCAGAAGAT  391

seq1  TCCGGTTTGTTGCGTCTTTCTTGCCGGTCGAGTGGGATGCAATACAGTCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGTTTGTTGCGTCTTTCTTGCCGGTCGAGTGGGATGCAATACAGTCC  441

seq1  GTGGCACTTTGCTAAGATTACAGATGGTTGGTATATTTTTTAACACGAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTTTGCTAAGATTACAGATGGTTGGTATATTTTTTAACACGAGG  491

seq1  AATAAATTATTATCAGTCTATGCCTTCCAGTTGGTGCTAGACATGTGGTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTATTATCAGTCTATGCCTTCCAGTTGGTGCTAGACATGTGGTT  541

seq1  GTGTTGTTTGAGGTTTTAGGTCTAAGACTGGGCTCTGGCAGACCGAACAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTTGAGGTTTTAGGTCTAAGACTGGGCTCTGGCAGACCGAACAA  591

seq1  CCTAGGTTTAGCAACACATTCCCAAGACAAAAAGAAGAAGAGAAGGAGGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTTTAGCAACACATTCCCAAGACAAAAAGAAGAAGAGAAGGAGGA  641

seq1  GAAAGAGGAGAAAGAAGAGGAGAATAGAGCTAGAGGAACATAAGAATAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGAGAAAGAAGAGGAGAATAGAGCTAGAGGAACATAAGAATAAG  691

seq1  AGGGAAAGTATATGGGATAGAAGAGTCAACATGTAAGGCAAAAACAATAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGTATATGGGATAGAAGAGTCAACATGTAAGGCAAAAACAATAA  741

seq1  AAATCAGCACAGAGAAAGAAAAAAAATTTAAGATCAAATCTAAGAAGCCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGCACAGAGAAAGAAAAAAAATTTAAGATCAAATCTAAGAAGCCA  791

seq1  GGTGTGGTGGCGCATGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTGGCGCATGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGG  841

seq1  CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGAC  891

seq1  AACCAGAGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACAAAACAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACAAAACAAA  941

seq1  AAAGAACAGATCTAAGAAATTGAAAACAACCAAATTAAAAGATGAATCAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAGATCTAAGAAATTGAAAACAACCAAATTAAAAGATGAATCAA  991

seq1  AATTCTTTTTAAAATATAAATTTATTTCTCTCCATCTCCTTCCAGTTGTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTTAAAATATAAATTTATTTCTCTCCATCTCCTTCCAGTTGTC  1041

seq1  TCTTGTAGCTTACTCTGGCTGAATGATGGCTGATTATCTTTCTAAGTCTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAGCTTACTCTGGCTGAATGATGGCTGATTATCTTTCTAAGTCTA  1091

seq1  ACATGTTAGAGCATAAAAATGTACTTGCA  1123
      |||||||||||||||||||||||||||||
seq2  ACATGTTAGAGCATAAAAATGTACTTGCA  1120