BAC Information

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BAC

Clone NameB6Ng01-023O21
Chromosome10 (Build37)
Map Location 93,327,082 - 93,459,914
singlet/doubletdoublet
Overlap geneMetap2, Vezt
Upstream gene4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44
Downstream geneFgd6, Nr2c1, Ndufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik, Plxnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023O21.bB6Ng01-023O21.g
ACCDH855713DH855714
length9691,028
definitionDH855713|Mus musculus domesticus DNA, BAC clone: B6Ng01-023O21, 5' end.DH855714|Mus musculus domesticus DNA, BAC clone: B6Ng01-023O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,327,082 - 93,328,054)(93,458,886 - 93,459,914)
sequence
gaattccatatcaagattttgaaaagcaggctggagagatggctcagtga
gtaagagcactgactgctcttccgaaggtccagagttcaaatcccagcaa
ccgcatagtggctcacaaccattagatataataataaataaaccttaaaa
aaaagattttgaaaagccaaaaaattaacaatgaaataatgacattacac
gtttagtggaataacctaagaaaaaaattaattaaaattttaaaataaaa
ctacttataatcagctaaacgcattttaagatttatacagcataactcta
agtcttagccaagtatccccaaagccaactgaaaactgtttttgcctctg
tctaggtaggtgggtcaggtggtagatggagtacaagccccaggcttgac
ctcagtaccacacgaagcaggctaggggcaaacacatgcaagcactctgg
aggtggaggcaggcgcgtcaactgaagtcaccttcagcattaggtttcaa
ggccaccgtgggaaagtgagacccagtctctcaaacattaaaggttcttt
gtagccattttatttccttggacttaagaagatttcagttgacttctccg
tcttgtttgcatacactgtccttttcagtttactcctcagtctttccccc
aactttcatgaggtttagaaacattagagaaaggaggactgtggccagca
gattggtcagaaaagacctgggggcagaagactacaccagcagcacgaat
gctgagcaccggaaggcacaagtgaccctaggaaaaccctaaagcagcag
ctcaaagagactaaagggcagactaggaaataactggcctccaaatctca
acttgattcatagaaacaagtacgagattcactaataatgagactctggc
tctctctcatccttatgtccccagagtcagtcaactttaatgcccaggga
catttcccaggtatcttct
gaattccattcctgctttctcgtctgatggcctttccttggtttctgtgt
tcatagggatgtctcgctgctgtttgccttcattagtttgctcatcatgt
ttcccacgtgctggattgtgtcctcctggctggtgtggggaataattcta
tttctttacttgatcatacgagttttgaaattatggaggacagccaaact
gcaaatgactctgaaaaaatatagggtacgtttggaagacatggcagcca
atagccgagccttcaccaaccttgtgagaaaatcactgcgtctcatccaa
gaaactgaagtcatttccaggggatttactctgtgagttaatttctcact
ttctcttttaaaggatactgtcctgctatttactctaaggagaatgccat
ccgtttttgtgttacagttgtgtcagaagtccacaccgtccattagtgaa
gcgatagagtcattatatattagaagggtgtaaagtagggttctgcttat
ctgcttgcatccatgttttatgaaaaatgttttgtgaatcatagttgctt
tgatcaattgctatgtgactgagacagtgagggtgtttaatactaataca
gtggagcccatttttgcttcctttgttccctatcaaaagacctcattgct
cagttcacattatagatgtacctgacacgaactcactttaaaatgtaagc
atacattaataacactccctggctgaccattagcagctgctgttgcacgc
tcccatagggaactaaatattgagcagtctaagctgtcagtgtttacgct
gcaggatatatactggatacttcctgaaaggggatgcagggctagggtga
tggctcacaggtaagaacacttgtgcaagcatgaggacttgggttcacat
ccccaccacctgtataaaagccaggcattggcacatgatggagctgtaac
cgcagtactttagaaggagtggtcaggaatgttggtgaaacttactgacc
actgaccctgggtcttaaatccctgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_93327082_93328054
seq2: B6Ng01-023O21.b_44_1012

seq1  GAATTCCATATCAAGATTTTGAAAAGCAGGCTGGAGAGATGGCTCAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATCAAGATTTTGAAAAGCAGGCTGGAGAGATGGCTCAGTGA  50

seq1  GTAAGAGCACTGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGCACTGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAA  100

seq1  CCGCATAGTGGCTCACAACCATTAGATATAATAATAAATAAACCTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATAGTGGCTCACAACCATTAGATATAATAATAAATAAACCTTAAAA  150

seq1  AAAAGATTTTGAAAAGCCAAAAAATTAACAATGAAATAATGACATTACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTTTGAAAAGCCAAAAAATTAACAATGAAATAATGACATTACAC  200

seq1  GTTTAGTGGAATAACCTAAGAAAAAAATTAATTAAAATTTTAAAATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTGGAATAACCTAAGAAAAAAATTAATTAAAATTTTAAAATAAAA  250

seq1  CTACTTATAATCAGCTAAACGCATTTTAAGATTTATACAGCATAACTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTATAATCAGCTAAACGCATTTTAAGATTTATACAGCATAACTCTA  300

seq1  AGTCTTAGCCAAGTATCCCCAAAGCCAACTGAAAACTGTTTTTGCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAGCCAAGTATCCCCAAAGCCAACTGAAAACTGTTTTTGCCTCTG  350

seq1  TCTAGGTAGGTGGGTCAGGTGGTAGATGGAGTACAAGCCCCAGGCTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTAGGTGGGTCAGGTGGTAGATGGAGTACAAGCCCCAGGCTTGAC  400

seq1  CTCAGTACCACACGAAGCAGGCTAGGGGCAAACACATGCAAGCACTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTACCACACGAAGCAGGCTAGGGGCAAACACATGCAAGCACTCTGG  450

seq1  AGGTGGAGGCAGGCGCGTCAACTGAAGTCACCTTCAGCATTAGGTTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAGGCAGGCGCGTCAACTGAAGTCACCTTCAGCATTAGGTTTCAA  500

seq1  GGCCACCGTGGGAAAGTGAGACCCAGTCTCTCAAACATTAAAGGTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCGTGGGAAAGTGAGACCCAGTCTCTCAAACATTAAAGGTTCTTT  550

seq1  GTAGCCATTTTATTTCCTTGGACTTAAGAAGA-TTCAGTTGACTTCTCCG  599
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTAGCCATTTTATTTCCTTGGACTTAAGAAGATTTCAGTTGACTTCTCCG  600

seq1  TCTTGTTTGCATACACTGTCCTTTTCAGTTTACTCCTCAGTC-TTCCCCC  648
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTTGTTTGCATACACTGTCCTTTTCAGTTTACTCCTCAGTCTTTCCCCC  650

seq1  AAC-TTCATGAGGTTTAG-AACATTAGAGAAAGGAGGACTGTGGCCAGCA  696
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACTTTCATGAGGTTTAGAAACATTAGAGAAAGGAGGACTGTGGCCAGCA  700

seq1  GA-TGGTCAG-AAAGACCT-GGGGCAGAAGACTACACCAGCAGCACGAAT  743
      || ||||||| |||||||| ||||||||||||||||||||||||||||||
seq2  GATTGGTCAGAAAAGACCTGGGGGCAGAAGACTACACCAGCAGCACGAAT  750

seq1  GCTGAGCACCGGAAGGCACAAGTGACCCTAGGAAAACCCTAAAGCAGCAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCACCGGAAGGCACAAGTGACCCTAGGAAAACCCTAAAGCAGCAG  800

seq1  CTCAAAGAGACTAAAGGGCAGACTAGGAAATAACTGGCCTCCAGATTCTC  843
      ||||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  CTCAAAGAGACTAAAGGGCAGACTAGGAAATAACTGGCCTCCA-AATCTC  849

seq1  AACTTGATTCAAAAGAAACAAGTAGGAGAATCACCAATAAATGAGACTCT  893
      |||||||||| | ||||||||||| |||| |||| ||| |||||||||||
seq2  AACTTGATTC-ATAGAAACAAGTACGAGATTCACTAAT-AATGAGACTCT  897

seq1  GGCCTCTCTCTCATCCTTAATGTCCCACAGAGCTCAGTTCAACTTTAGAT  943
      || ||||||||||||||| ||||||| ||||| |||| ||||||||| ||
seq2  GG-CTCTCTCTCATCCTT-ATGTCCC-CAGAG-TCAG-TCAACTTTA-AT  941

seq1  GCCACAGGGTACATTTCCCAGGTATCTTCT  973
      ||| ||||| ||||||||||||||||||||
seq2  GCC-CAGGG-ACATTTCCCAGGTATCTTCT  969

seq1: chr10_93458886_93459914
seq2: B6Ng01-023O21.g_68_1095 (reverse)

seq1  TATCAGGGAATCTAGAACCA-GGCCAGTGGTCAGTAAGTCTCAACAACAT  49
      ||||||||| |  ||| ||| || ||||||||||||||| ||| ||||||
seq2  TATCAGGGATTTAAGACCCAGGGTCAGTGGTCAGTAAGTTTCACCAACAT  50

seq1  TCCTGACCACTCC-TCTATAGTACTGCGGTTACAGCTCCATCATGTGGCC  98
      ||||||||||||| |||| |||||||||||||||||||||||||||| | 
seq2  TCCTGACCACTCCTTCTAAAGTACTGCGGTTACAGCTCCATCATGTGCCA  100

seq1  ATGCCTGGCTTTTTATACAGGTGGTGGGGATGTGAACCCAAGTCCTCATG  148
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGGC-TTTTATACAGGTGGTGGGGATGTGAACCCAAGTCCTCATG  149

seq1  CTTGCACAAGTGTTCTTACCTGCTGAGCCATCACCCTAGCCCTGCATTCC  198
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  CTTGCACAAGTGTTCTTACCTG-TGAGCCATCACCCTAGCCCTGCA-TCC  197

seq1  CCTTTCAGGAAGTATCCAGTATATATCCTGCAGCGTAAACACTGACAGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGGAAGTATCCAGTATATATCCTGCAGCGTAAACACTGACAGCT  247

seq1  TAGACTGCTCAATATTTAGTTCCCTATGGGAGCGTGCAACAGCAGCTGCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGCTCAATATTTAGTTCCCTATGGGAGCGTGCAACAGCAGCTGCT  297

seq1  AATGGTCAGCCAGGGAGTGTTATTAATGTATGCTTACATTTTAAAGTGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCAGCCAGGGAGTGTTATTAATGTATGCTTACATTTTAAAGTGAG  347

seq1  TTCGTGTCAGGTACATCTATAATGTGAACTGAGCAATGAGGTCTTTTGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTCAGGTACATCTATAATGTGAACTGAGCAATGAGGTCTTTTGAT  397

seq1  AGGGAACAAAGGAAGCAAAAATGGGCTCCACTGTATTAGTATTAAACACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACAAAGGAAGCAAAAATGGGCTCCACTGTATTAGTATTAAACACC  447

seq1  CTCACTGTCTCAGTCACATAGCAATTGATCAAAGCAACTATGATTCACAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTCTCAGTCACATAGCAATTGATCAAAGCAACTATGATTCACAA  497

seq1  AACATTTTTCATAAAACATGGATGCAAGCAGATAAGCAGAACCCTACTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTCATAAAACATGGATGCAAGCAGATAAGCAGAACCCTACTTT  547

seq1  ACACCCTTCTAATATATAATGACTCTATCGCTTCACTAATGGACGGTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTTCTAATATATAATGACTCTATCGCTTCACTAATGGACGGTGTG  597

seq1  GACTTCTGACACAACTGTAACACAAAAACGGATGGCATTCTCCTTAGAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTGACACAACTGTAACACAAAAACGGATGGCATTCTCCTTAGAGT  647

seq1  AAATAGCAGGACAGTATCCTTTAAAAGAGAAAGTGAGAAATTAACTCACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAGGACAGTATCCTTTAAAAGAGAAAGTGAGAAATTAACTCACA  697

seq1  GAGTAAATCCCCTGGAAATGACTTCAGTTTCTTGGATGAGACGCAGTGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAATCCCCTGGAAATGACTTCAGTTTCTTGGATGAGACGCAGTGAT  747

seq1  TTTCTCACAAGGTTGGTGAAGGCTCGGCTATTGGCTGCCATGTCTTCCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACAAGGTTGGTGAAGGCTCGGCTATTGGCTGCCATGTCTTCCAA  797

seq1  ACGTACCCTATATTTTTTCAGAGTCATTTGCAGTTTGGCTGTCCTCCATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACCCTATATTTTTTCAGAGTCATTTGCAGTTTGGCTGTCCTCCATA  847

seq1  ATTTCAAAACTCGTATGATCAAGTAAAGAAATAGAATTATTCCCCACACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAACTCGTATGATCAAGTAAAGAAATAGAATTATTCCCCACACC  897

seq1  AGCCAGGAGGACACAATCCAGCACGTGGGAAACATGATGAGCAAACTAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAGGACACAATCCAGCACGTGGGAAACATGATGAGCAAACTAAT  947

seq1  GAAGGCAAACAGCAGCGAGACATCCCTATGAACACAGAAACCAAGGAAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAAACAGCAGCGAGACATCCCTATGAACACAGAAACCAAGGAAAG  997

seq1  GCCATCAGACGAGAAAGCAGGAATGGAATTC  1029
      |||||||||||||||||||||||||||||||
seq2  GCCATCAGACGAGAAAGCAGGAATGGAATTC  1028