BAC Information

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BAC

Clone NameB6Ng01-024N11
Chromosome10 (Build37)
Map Location 47,148,243 - 47,306,920
singlet/doubletdoublet
Overlap geneLOC100042387
Upstream geneLOC100041632, LOC668252
Downstream geneLOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024N11.bB6Ng01-024N11.g
ACCDH856357DH856358
length7061,062
definitionDH856357|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N11, 5' end.DH856358|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,306,215 - 47,306,920)(47,148,243 - 47,149,313)
sequence
gaattcaacaataattctaagtaattttaaataaaacaatgtgaacatat
tccttggataatttctaactattaaatagcttcccaacaccgctaacctt
cagtataaatatacaacagataatcagtatttgaattgacagcagttatc
tttagaatgtaaaggccaatttctaatctgtgagtattctcattacagta
acataacagctatgggggttatttatatctataatttaagtgtagcttgt
ctcagattcattaaacaccattttactgataaaatttagaaaaaaatgca
catataaaactgttacaaaatctctgcttttgagtgaaaagatagttggc
atagtggtacatttcttttatcccaataattagaaagcaaaggaaaggca
agaggatcacaaggccattacaaacctaaactacataataagaaactatg
agagagttataaaaaaaggtaagatttaatctattcaaatgaaagcaatg
ttaaaatcacatcagtttttactgagaggctcatgtataaaataattgta
gatgcatataatcattaacgtaattcacatccaattgaccatttccagtt
tgcttttagtgatatataaagtgcatatcatattgaaattatcagccaca
tattaaaataaatgtctcagtcacagaagaaagggcaaaattaggacaag
atgtac
gaattctttttagtggtagaatgctgtatatgagttcttttaattttttg
aattatgggaaattttctttctctttcatttctgtcagattattttgcta
ggcatagttgtctaggttattagtcatcggattcaaacaatgacccaggg
acattttattacttatgaaagcttaaaccttatgacctaggcttgtttcc
aactatttcctacaatttaataactcgtttatactaatctatatttgcca
catggcctgttatctctctgtcaattcccatatactcaacttcctccacg
tagatgggcagggaggaattctagtgcctgattattttccaggtcctatc
tctgctgggaagttttgccattcttctccagtcatcttttatccttcaat
cctgtcagattattttgctaggcatagtagtctaggttggtagttattgc
attttaaagtggatttctctaggcatttctgaaggtctatgttttcactg
ttctttattaaaccaatgaaaagatgatggataagaatgtttataagata
ttcaggcaagtgatgatccaatgaaaataataataccaagatctggtctg
aactaaactctgtgctagtacataagtcaatatttgaataatacaaagac
aacctttactaagagaaaaaaaaaaaagatcccaacattttcccaggctt
aacatttgggattgtgttctttctatatctatatcagtatgtcttttctt
agtttggggaagtttaactcaatgatcttattagaaatcctgtctcttcc
atttatgtgcttttagttcaaagtttatttcagtctgagttctctttaat
attttctctatctttattgaacatttagaaaggtatgaattattttacta
taataaataaaaaactatggaattaatacctctcagactattttttaact
catttagtcaatttcctttaaaatgccacaaaaacaattatcatactctg
tttatcatttaaaggaagaaaggaaagaactagaagcagaaggcattctg
cttaatttagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_47306215_47306920
seq2: B6Ng01-024N11.b_43_748 (reverse)

seq1  GTACATCTTGTCCTAATTTTGCCCTTTCTTCTGTGACTGAGACATTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTTGTCCTAATTTTGCCCTTTCTTCTGTGACTGAGACATTTATT  50

seq1  TTAATATGTGGCTGATAATTTCAATATGATATGCACTTTATATATCACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGTGGCTGATAATTTCAATATGATATGCACTTTATATATCACTA  100

seq1  AAAGCAAACTGGAAATGGTCAATTGGATGTGAATTACGTTAATGATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAACTGGAAATGGTCAATTGGATGTGAATTACGTTAATGATTATA  150

seq1  TGCATCTACAATTATTTTATACATGAGCCTCTCAGTAAAAACTGATGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTACAATTATTTTATACATGAGCCTCTCAGTAAAAACTGATGTGA  200

seq1  TTTTAACATTGCTTTCATTTGAATAGATTAAATCTTACCTTTTTTTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACATTGCTTTCATTTGAATAGATTAAATCTTACCTTTTTTTATAA  250

seq1  CTCTCTCATAGTTTCTTATTATGTAGTTTAGGTTTGTAATGGCCTTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCATAGTTTCTTATTATGTAGTTTAGGTTTGTAATGGCCTTGTGA  300

seq1  TCCTCTTGCCTTTCCTTTGCTTTCTAATTATTGGGATAAAAGAAATGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCCTTTCCTTTGCTTTCTAATTATTGGGATAAAAGAAATGTAC  350

seq1  CACTATGCCAACTATCTTTTCACTCAAAAGCAGAGATTTTGTAACAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGCCAACTATCTTTTCACTCAAAAGCAGAGATTTTGTAACAGTTT  400

seq1  TATATGTGCATTTTTTTCTAAATTTTATCAGTAAAATGGTGTTTAATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGCATTTTTTTCTAAATTTTATCAGTAAAATGGTGTTTAATGAA  450

seq1  TCTGAGACAAGCTACACTTAAATTATAGATATAAATAACCCCCATAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACAAGCTACACTTAAATTATAGATATAAATAACCCCCATAGCTG  500

seq1  TTATGTTACTGTAATGAGAATACTCACAGATTAGAAATTGGCCTTTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTACTGTAATGAGAATACTCACAGATTAGAAATTGGCCTTTACAT  550

seq1  TCTAAAGATAACTGCTGTCAATTCAAATACTGATTATCTGTTGTATATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGATAACTGCTGTCAATTCAAATACTGATTATCTGTTGTATATTT  600

seq1  ATACTGAAGGTTAGCGGTGTTGGGAAGCTATTTAATAGTTAGAAATTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAGGTTAGCGGTGTTGGGAAGCTATTTAATAGTTAGAAATTATC  650

seq1  CAAGGAATATGTTCACATTGTTTTATTTAAAATTACTTAGAATTATTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAATATGTTCACATTGTTTTATTTAAAATTACTTAGAATTATTGTT  700

seq1  GAATTC  706
      ||||||
seq2  GAATTC  706

seq1: chr10_47148243_47149313
seq2: B6Ng01-024N11.g_68_1129

seq1  GAATTCTTTTTAGTGGTAGAATGCTGTATATGAGTTCTTTTAATTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAGTGGTAGAATGCTGTATATGAGTTCTTTTAATTTTTTG  50

seq1  AATTATGGGAAATTTTCTTTCTCTTTCATTTCTGTCAGATTATTTTGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGGGAAATTTTCTTTCTCTTTCATTTCTGTCAGATTATTTTGCTA  100

seq1  GGCATAGTTGTCTAGGTTATTAGTCATCGGATTCAAACAATGACCCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGTTGTCTAGGTTATTAGTCATCGGATTCAAACAATGACCCAGGG  150

seq1  ACATTTTATTACTTATGAAAGCTTAAACCTTATGACCTAGGCTTGTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTATTACTTATGAAAGCTTAAACCTTATGACCTAGGCTTGTTTCC  200

seq1  AACTATTTCCTACAATTTAATAACTCGTTTATACTAATCTATATTTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTCCTACAATTTAATAACTCGTTTATACTAATCTATATTTGCCA  250

seq1  CATGGCCTGTTATCTCTCTGTCAATTCCCATATACTCAACTTCCTCCACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCTGTTATCTCTCTGTCAATTCCCATATACTCAACTTCCTCCACG  300

seq1  TAGATGGGCAGGGAGGAATTCTAGTGCCTGATTATTTTCCAGGTCCTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGGCAGGGAGGAATTCTAGTGCCTGATTATTTTCCAGGTCCTATC  350

seq1  TCTGCTGGGAAGTTTTGCCATTCTTCTCCAGTCATCTTTTATCCTTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGGAAGTTTTGCCATTCTTCTCCAGTCATCTTTTATCCTTCAAT  400

seq1  CCTGTCAGATTATTTTGCTAGGCATAGTAGTCTAGGTTGGTAGTTATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGATTATTTTGCTAGGCATAGTAGTCTAGGTTGGTAGTTATTGC  450

seq1  ATTTTAAAGTGGATTTCTCTAGGCATTTCTGAAGGTCTATGTTTTCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGTGGATTTCTCTAGGCATTTCTGAAGGTCTATGTTTTCACTG  500

seq1  TTCTTTATTAAACCAATGAAAAGATGATGGATAAGAATGTTTATAAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTAAACCAATGAAAAGATGATGGATAAGAATGTTTATAAGATA  550

seq1  TTCAGGCAAGTGATGATCCAATGAAAATAATAATACCAAGATCTGGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCAAGTGATGATCCAATGAAAATAATAATACCAAGATCTGGTCTG  600

seq1  AACTAAACTCTGTGCTAGTACATAAGTCAATATTTGAATAATACAAAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAACTCTGTGCTAGTACATAAGTCAATATTTGAATAATACAAAGAC  650

seq1  AACCTTTACTAAGAGAAAAAAAAAAAAGATCCCAACATTTTCCCAGGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTACTAAGAGAAAAAAAAAAAAGATCCCAACATTTTCCCAGGCTT  700

seq1  AACATTTGGGATTGTGTTCTTTCTATATCTATATCAGTATGTCTTTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGGGATTGTGTTCTTTCTATATCTATATCAGTATGTCTTTTCTT  750

seq1  AGTTTGGGGAAGTTTAACTCAATGATCTTATTAGAAATCCTGTCTCTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGGAAGTTTAACTCAATGATCTTATTAGAAATCCTGTCTCTTCC  800

seq1  ATTTATGTGCTTTTAGTTCAAAGTTTATTTCAGTCTGAGTTCTCTTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTGCTTTTAGTTCAAAGTTTATTTCAGTCTGAGTTCTCTTTAAT  850

seq1  A-TTTCTCTATCTTTATTGAACATTTAGAAAGGTATGAATTA-TTTACTA  898
      | |||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTTTCTCTATCTTTATTGAACATTTAGAAAGGTATGAATTATTTTACTA  900

seq1  TAATAAATAAAAAACTATGGAATTAAATACCTCTCAGACTATTTTTTAAC  948
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAATAAATAAAAAACTATGGAATT-AATACCTCTCAGACTATTTTTTAAC  949

seq1  TCCATTTAGTCAAATTTCCTTTAAAAATGCCAC-AAAACAATTATCATAA  997
      | ||||||||| |||||||||| |||||||||| |||||||||||||| |
seq2  T-CATTTAGTC-AATTTCCTTT-AAAATGCCACAAAAACAATTATCAT-A  995

seq1  CTCTGTTTTAATCATTTAAAGGAGAAAAGGAAAAGAACTAGAAGCAAGAA  1047
      ||||||||  |||||||||||||  ||||| |||||||||||||| ||||
seq2  CTCTGTTT--ATCATTTAAAGGAAGAAAGG-AAAGAACTAGAAGC-AGAA  1041

seq1  GGCAATTTCTGCTTAATCTTAGTA  1071
      ||||  ||||||||||| ||||||
seq2  GGCA--TTCTGCTTAAT-TTAGTA  1062