BAC Information

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BAC

Clone NameB6Ng01-025D05
Chromosome10 (Build37)
Map Location 105,554,739 - 105,555,666
singlet/doubletsinglet
Overlap genenone
Upstream geneTmtc2, EG627573, BC067068, Ccdc59, EG667758
Downstream geneEG639162, Ppfia2, Olfr1556-ps1, 8430416H19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025D05.bB6Ng01-025D05.g
ACCDH856621DH856622
length9361,144
definitionDH856621|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D05, 5' end.DH856622|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttatctaggtagtagtggaatgagcatctgtaatcagtcctt
ctgccagcaccactatggcattggagagcttccctaagccttaggtggga
ggggatgtggatgccccatttagactgcattccacactctgtactttgaa
cagctgtgagtatgatggtcaccccaaagagaagcttcagtgaggagggt
ggagaacaacacagatctgtgtggataaggatgagtaaacagaaggaagc
ttgatgtgactgcccatttaacaaaataatagtagtaggttctccaatac
tgcctgttatctcctaaatcatgggatttgtcccaggtttacaatatcaa
gcatgaatcccctcctgtggaataggcttaaatttttttccttttttttt
ttttttaattaggtattttcttcatttaggccttaaatttaacctgaaag
tttttggttaccccaatgacattcaaactactattttagctgtactacag
agcaattgtgataaaaactgcatggtattggtatagtgacagacaagtag
accaatgggacagaattgaagacccagagatgaatccacacacctatggt
cactagatctttgacaagggagctaaaaccatccagtggaaaaaagacag
cattttcaacaaatggtgctggcacaactggcagttatcatgtagaagaa
tgccaattgatccatttctatctccttgtactaaggtcaaatctaagtgg
attaaggaactccacataaaaccagagatgctgaaacttatagaggagaa
agtagggaaaagcctcaaagacatgtgtacaggggaaaaattcctgaatg
aacagcaatggcttgtgctgtaagatcgagaatcgataattgaactcata
aattgcaaagcttctgcaagcaaaagacaccgtcat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaattggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tgagagctagagaaagtacccaagagctaaggatctcaccctatagtgga
cacatatgactaacagtaccctggctctgacctctagctgcatatgtatc
aaagaatggctagtcgcatcacttgaagaagccaatgaacgcgaactttg
tgtgcccggtacaggacgccaggcaaggggggaggtggtgggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_105554739_105555666
seq2: B6Ng01-025D05.b_47_969

seq1  GAATTCACTTATCTAGGTAGTAGTGGAATGAGCATCTGTAATCAGTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTATCTAGGTAGTAGTGGAATGAGCATCTGTAATCAGTCCTT  50

seq1  CTGCCAGCACCACTATGGCATTGGAGAGCTTCCCTAAGCCTTAGGTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGCACCACTATGGCATTGGAGAGCTTCCCTAAGCCTTAGGTGGGA  100

seq1  GGGGATGTGGATGCCCCATTTAGACTGCATTCCACACTCTGTACTTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGTGGATGCCCCATTTAGACTGCATTCCACACTCTGTACTTTGAA  150

seq1  CAGCTGTGAGTATGATGGTCACCCCAAAGAGAAGCTTCAGTGAGGAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGAGTATGATGGTCACCCCAAAGAGAAGCTTCAGTGAGGAGGGT  200

seq1  GGAGAACAACACAGATCTGTGTGGATAAGGATGAGTAAACAGAAGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACAACACAGATCTGTGTGGATAAGGATGAGTAAACAGAAGGAAGC  250

seq1  TTGATGTGACTGCCCATTTAACAAAATAATAGTAGTAGGTTCTCCAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGACTGCCCATTTAACAAAATAATAGTAGTAGGTTCTCCAATAC  300

seq1  TGCCTGTTATCTCCTAAATCATGGGATTTGTCCCAGGTTTACAATATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTATCTCCTAAATCATGGGATTTGTCCCAGGTTTACAATATCAA  350

seq1  GCATGAATCCCCTCCTGTGGAATAGGCTTAAATTTTTTTCCTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAATCCCCTCCTGTGGAATAGGCTTAAATTTTTTTCCTTTTTTTTT  400

seq1  TTTTTTAATTAGGTATTTTCTTCATTTAGGCCTTAAATTTAACCTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTAGGTATTTTCTTCATTTAGGCCTTAAATTTAACCTGAAAG  450

seq1  TTTTTGGTTACCCCAATGACATTCAAACTACTATTTTAGCTGTACTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTTACCCCAATGACATTCAAACTACTATTTTAGCTGTACTACAG  500

seq1  AGCAATTGTGATAAAAACTGCATGGTATTGGTATAGTGACAGACAAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTGTGATAAAAACTGCATGGTATTGGTATAGTGACAGACAAGTAG  550

seq1  ACCAATGGGACAGAATTGAAGACCCAGAGATGAATCCACACACCTATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGGACAGAATTGAAGACCCAGAGATGAATCCACACACCTATGGT  600

seq1  CACTAGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAG  650

seq1  CATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAGAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAACAAATGGTGCTGGCACAACTGGCAGTTATCATGTAGAAGAA  700

seq1  TGCCAATTGATCCATTTCTATCTCCTTGTACTAAGGTCAAATCTAAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATTGATCCATTTCTATCTCCTTGTACTAAGGTCAAATCTAAGTGG  750

seq1  ATTAAGGAACTCCACATAAAACCAGAGATGCTGAAACTTATAGAGGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGAACTCCACATAAAACCAGAGATGCTGAAACTTATAGAGGAGAA  800

seq1  AGTAGGGAAAAGCCTCAAAGACATGTGTACAGGGGAAAAATTCCTGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTAGGGAAAAGCCTCAAAGACATGTGTACAGGGGAAAAATTCCTGAAT-  849

seq1  GAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGATAAATGGAACCTC  900
      |||||||||||||||||||||||||||||||||||||||| ||  | |||
seq2  GAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGATAATTG--AACTC  897

seq1  ATAAAATTGCAAAGCTTCTGCAAAGCAA  928
      || |||||||||||||||||| ||||||
seq2  AT-AAATTGCAAAGCTTCTGC-AAGCAA  923