BAC Information

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BAC

Clone NameB6Ng01-030K09
Chromosome10 (Build37)
Map Location 126,417,700 - 126,418,551
singlet/doubletsinglet
Overlap genenone
Upstream geneLrig3, LOC100043547, LOC668336, Xrcc6bp1, LOC622567
Downstream geneCtdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030K09.bB6Ng01-030K09.g
ACCDH860488DH860489
length1,058852
definitionDH860488|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K09, 5' end.DH860489|Mus musculus domesticus DNA, BAC clone: B6Ng01-030K09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttttctggtattcttttgctggttggggtaaggagactccc
atttcagcatcatggagtcgcaccctgctgtgcaccccatctggttgggg
aatctggctgttgtctggaaaaggctctgctgggttattgtctggatatg
gggctcataaaggagaagctcccggatgtcgcttggctcagcttttaagg
ggcctggctacatttgcagaggacaccccacgcccacttctttctttctt
tttaaatttacttttagaattatttattttatgtgtatgaatgttctgcc
tgcttgtatatctgtgcatcacatgcatgcctggtgtcttagttagggtt
ttactgctgtgaacagataccatgaccaaggcaactctttttttaaaaaa
tgcttacttacttactttatttatttatttatttatttatttaaaagatt
tgtttatttaatttatatgggcacactgtagctgtcttcagacacaccag
aagaaggcatcagatctctttacagatggttgtgagccaccatgtggttt
ctgggaactgaacaggacctctggaagagcagtcagtgctcttaactgct
gagccatctccccagccctattttatttatttatatttcaaatgttatcc
cccttccaggtttcccctctgcaaatcccctatcctgtccctcctcccct
tgcttctatgaaggtgctcctcccatccactcacccactcctgcttcact
gccctggcattcccctacaatggggcattgagcttccacagggtcaaggg
cctcccctcccattgaggacagacaaggccatcttctgctacatatgcag
ctggagccatgggtccatccgtgtactctttggctggtggtttagtccct
ggaagctctggagggggaagcatgtttgttgatattgttcttcctatggg
gttgcaaaggacaggaggcaactctcataagacaacattactggagttgg
ctacaagttcaaagatcagtccattattcctcaagggggagccagagcac
ctagcagt
gaattccttgttaggttgggggaaggggagcggtgcgtgtttcttggcct
tctgaagcagactgcactgaggagagccgaagccctgcctgcccctcctc
tttgccagggtcccctgttctaactgcatcactgacccagctgtgagatc
ggcggcgcagcaagttcacctcctctcctgctggcctctcagcagtgctg
agcgccgcaaagggaggctgcctgtgtttatcagttactgccagggttca
gttcccgttgcagcctcatcccaggaataggacccacgcttcaggatggg
aaaggacataagaggagggggtagtgacaagaagccggcatggcgtgtgc
ctccttcccacctgtgcgccctgcagggtctcctaggtgtcttgagggtg
gcgggccacatcgggataagaagactcgggactgtgctgtagctgcactg
agcaaatcagagctgaagtttaatccggcaggatgagtgacaggcagcgg
agagcagagcagctggctcctgaccgtgtcaggttgctggttgagttttc
ttggagttacagttttgtttttcttttttgtgtgtagttttgtccttcac
atttctccctgggaggaatctgaattctccagccagcagcctcttggtgt
tctctcccccctccccttttcttcaattgcattctctgggaaaggcgtgc
ttgcttctgagcagcttggcacccagctacccatgcaactagctgagtgg
acatcatttacaaacagaactgcatcttaacactcgtttaggaattccac
cctccctctcaccatcttccatccccaactctgtctaccttttggaagag
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126417700_126418551
seq2: B6Ng01-030K09.g_70_921

seq1  GAATTCCTTGTTAGGTTGGGGGAAGGGGAGCGGTGCGTGTTTCTTGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTAGGTTGGGGGAAGGGGAGCGGTGCGTGTTTCTTGGCCT  50

seq1  TCTGAAGCAGACTGCACTGAGGAGAGCCGAAGCCCTGCCTGCCCCTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCAGACTGCACTGAGGAGAGCCGAAGCCCTGCCTGCCCCTCCTC  100

seq1  TTTGCCAGGGTCCCCTGTTCTAACTGCATCACTGACCCAGCTGTGAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGGGTCCCCTGTTCTAACTGCATCACTGACCCAGCTGTGAGATC  150

seq1  GGCGGCGCAGCAAGTTCACCTCCTCTCCTGCTGGCCTCTCAGCAGTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCGCAGCAAGTTCACCTCCTCTCCTGCTGGCCTCTCAGCAGTGCTG  200

seq1  AGCGCCGCAAAGGGAGGCTGCCTGTGTTTATCAGTTACTGCCAGGGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCGCAAAGGGAGGCTGCCTGTGTTTATCAGTTACTGCCAGGGTTCA  250

seq1  GTTCCCGTTGCAGCCTCATCCCAGGAATAGGACCCACGCTTCAGGATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCGTTGCAGCCTCATCCCAGGAATAGGACCCACGCTTCAGGATGGG  300

seq1  AAAGGACATAAGAGGAGGGGGTAGTGACAAGAAGCCGGCATGGCGTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACATAAGAGGAGGGGGTAGTGACAAGAAGCCGGCATGGCGTGTGC  350

seq1  CTCCTTCCCACCTGTGCGCCCTGCAGGGTCTCCTAGGTGTCTTGAGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCCACCTGTGCGCCCTGCAGGGTCTCCTAGGTGTCTTGAGGGTG  400

seq1  GCGGGCCACATCGGGATAAGAAGACTCGGGACTGTGCTGTAGCTGCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCCACATCGGGATAAGAAGACTCGGGACTGTGCTGTAGCTGCACTG  450

seq1  AGCAAATCAGAGCTGAAGTTTAATCCGGCAGGATGAGTGACAGGCAGCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATCAGAGCTGAAGTTTAATCCGGCAGGATGAGTGACAGGCAGCGG  500

seq1  AGAGCAGAGCAGCTGGCTCCTGACCGTGTCAGGTTGCTGGTTGAGTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGCAGCTGGCTCCTGACCGTGTCAGGTTGCTGGTTGAGTTTTC  550

seq1  TTGGAGTTACAGTTTTG-TTTTCTTTTTTGTGTGTAG-TTTGTCCTTCAC  598
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  TTGGAGTTACAGTTTTGTTTTTCTTTTTTGTGTGTAGTTTTGTCCTTCAC  600

seq1  ATTTCTCCCT-GGAGGAATCTGAATTCTCCAGCCAGCAGCCTCTTGGTG-  646
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  ATTTCTCCCTGGGAGGAATCTGAATTCTCCAGCCAGCAGCCTCTTGGTGT  650

seq1  TCTCTCCCCCCTCCCCTTTTCTTCAATTGCATTCTCTGGG-AAGGCGTGC  695
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTCTCCCCCCTCCCCTTTTCTTCAATTGCATTCTCTGGGAAAGGCGTGC  700

seq1  TTGCTTCTGAGCAGCTTGGCACCCAGC-AACCATGCCAACTAGCTGAGTT  744
      ||||||||||||||||||||||||||| | ||||| |||||||||||| |
seq2  TTGCTTCTGAGCAGCTTGGCACCCAGCTACCCATG-CAACTAGCTGAG-T  748

seq1  GGACATCATTTACAAACAGAACCTGCATCTTAACACTCGTTTAGGAATTC  794
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  GGACATCATTTACAAACAGAA-CTGCATCTTAACACTCGTTTAGGAATT-  796

seq1  CCACCCCTCCCCTCTCACCATCTCCCATCCCCAACTCCTGTCTACC-TTT  843
      ||||||   |||||||||||||| |||||||||||| ||||||||| |||
seq2  CCACCC--TCCCTCTCACCATCTTCCATCCCCAACT-CTGTCTACCTTTT  843

seq1  GGAAGAGCA  852
      |||||||||
seq2  GGAAGAGCA  852