BAC Information

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BAC

Clone NameB6Ng01-030M15
Chromosome10 (Build37)
Map Location 91,516,613 - 91,605,736
singlet/doubletdoublet
Overlap geneLOC100041799
Upstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030M15.bB6Ng01-030M15.g
ACCDH860586DH860587
length1,0731,001
definitionDH860586|Mus musculus domesticus DNA, BAC clone: B6Ng01-030M15, 5' end.DH860587|Mus musculus domesticus DNA, BAC clone: B6Ng01-030M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,604,654 - 91,605,736)(91,516,613 - 91,517,629)
sequence
gaattctatcattctgggtaattttgagcagtgaggcatagtgggaagat
caaactcgatgtcacaccataagacttgttaaaacctaaggacaatgggg
aatgagaggtgtgtggcaatgactttggagtgagaacatgggtcacttga
gggcccagtcttcgcttcctctcctctgaccttgcttctgtgtagaaggg
cacataatggggaagaagaagaaaaaaagcctaaacaagcaagatttgtt
aagagaagaaattccggtgtcagtaccaaaagaggtgacttttgcatctg
gaacgtctgagggcttcggaagtgttgtctcattaaaatgtatgaccaga
attaattcacattcattttgctaagagccaaatcacctgggtggaatttg
tgtgtggaatcataaataatgaataataagaaatgacaacaggttcatgg
agtggccaggagggccataggtatagcagagcctctccgactccctctgt
tatttatttatttttattattttagtttaattttattcatttatttattt
atttatttacttgtttttacttttggtgggctggaggctggggagatagt
tcagtcactaaagtcgttcctttgcaagcatggggacctttttgcaatcc
gcaagacccatgtcagaagaaaagaaacaaggtctaatgccactgtgggg
gaggcagagacaggacaggaggagccccagggctcactagctaaccaaat
gcctctacttcatgagttcaaggccagtgagagacttgatgggtagtacc
tgaaaaatgacattagatgtctttgggcttacataccacacaaatgtaca
cacatggacacatgttaatttacatgctccagggattatgatgaatatac
agacatactgggaaatacacactcacaatccaccacacattacacatcca
attcctagagacccacacacagggttttcattgtgtttattgaaactatt
ctgaatgtattgacattaaatagtagatctttaaacaatgacagtgaagt
ttgaattgcttttcatgatccta
gaattctgactgaatctgaagggctaaaccactggaatgttctcctagtt
aaaggcaaaaataatttaatcagagcagaagacaatgaacttaaatatat
ttcttagttgccaaatgttatgagatgatcaaaagggaggctactgccat
tcgctggacttcggtagtgggaagtgacaaagttatatggaaactggcgt
ctttttttttttttttttgttctctcaccttgcactgaacacatattact
tctcataaaagattcattttcacagcctgcagctctctccgagtcagcct
ctccctattccacaactaacatgtgatgctcattctgacttttctcaacc
ccaaaagttataaaatgcaggcctcaagtatgaaatactgaaatgaatct
tggtgggatccatgcagctgggtcgagactgtggaacttctctgcagctt
aagaacagggagactatccatttctaagactccatattagcctggcaact
gtatagacatagcaggtgttggctaggaagctgtgtttcctcagaattaa
tgacatgccattatggtagcaattcttccaagtctctagagtgtctgtaa
ttaagaagtttaactgtacttaaaatgatataaagtgtcattagtcccat
gctaaatcattccagattactgatttattctccagtgaaatcatccaggt
aattttctctgcctgagtaatgtaaggtttcacacatgaacacccctact
ggataaagctttgggttttctttgcagtaaaaataatagtggggctggcg
ctggagctggggctcaggggtagagcacttgacagcatgcgcaagtatct
gtctttcatttcatagactgccaaaacaacatgtttcttagagcttccag
cagtatcatgaaacttctgccattgtcttcagacatgtcttcgcagaaga
tctcactaatctggtggttcatactttgagtctttcttctatatttttgt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91604654_91605736
seq2: B6Ng01-030M15.b_46_1118 (reverse)

seq1  TAGGATCCATGAAAAGACATTTACAAACTTCAACCTGTCATTTGTTTTAA  50
      |||||| |||||||||  |||  |||||||||  ||||||||   |||||
seq2  TAGGAT-CATGAAAAGCAATT--CAAACTTCA--CTGTCATT--GTTTAA  43

seq1  AGATTCTACTTATTTTATGTCATATACAATTTCAGAATAGTTTCTATAAA  100
      ||| ||||| ||||| |||||| |||||  |||||||||||||| |||||
seq2  AGA-TCTAC-TATTTAATGTCA-ATACA--TTCAGAATAGTTTCAATAAA  88

seq1  CACAATGAAAACCCTGTGTGTGTGTCTCTATGAATTTGGATGTGT-ATGT  149
      |||||||||||||||||||||| ||||||| ||| |||||||||| ||||
seq2  CACAATGAAAACCCTGTGTGTGGGTCTCTAGGAA-TTGGATGTGTAATGT  137

seq1  GTGTGTGTTTGTGTGTGTGTATGTCCCAGTATGTCTGTATATTCATTCAT  199
      |||   | ||||| |||||||| |||||||||||||||||||||| ||||
seq2  GTGGTGGATTGTGAGTGTGTATTTCCCAGTATGTCTGTATATTCA-TCAT  186

seq1  -ATCCCT-GAGCATGTAAATTTACATGTGTCCATGTGTGTACATTTGTGT  247
       |||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  AATCCCTGGAGCATGTAAATTAACATGTGTCCATGTGTGTACATTTGTGT  236

seq1  -GTATGTAAGCCCAAAGACATCTAATGTCATTTTTCAGGTACTACCCATC  296
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTAAGCCCAAAGACATCTAATGTCATTTTTCAGGTACTACCCATC  286

seq1  AAGTCTCTCACTGGCCTTGAACTCATGAAGTAGAGGCATTTGGTTAGCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTCACTGGCCTTGAACTCATGAAGTAGAGGCATTTGGTTAGCTA  336

seq1  GTGAGCCCTGGGGCTCCTCCTGTCCTGTCTCTGCCTCCCCCACAGTGGCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCTGGGGCTCCTCCTGTCCTGTCTCTGCCTCCCCCACAGTGGCA  386

seq1  TTAGACCTTGTTTCTTTTCTTCTGACATGGGTCTTGCGGATTGCAAAAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTTGTTTCTTTTCTTCTGACATGGGTCTTGCGGATTGCAAAAAG  436

seq1  GTCCCCATGCTTGCAAAGGAACGACTTTAGTGACTGAACTATCTCCCCAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCATGCTTGCAAAGGAACGACTTTAGTGACTGAACTATCTCCCCAG  486

seq1  CCTCCAGCCCACCAAAAGTAAAAACAAGTAAATAAATAAATAAATAAATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCCCACCAAAAGTAAAAACAAGTAAATAAATAAATAAATAAATG  536

seq1  AATAAAATTAAACTAAAATAATAAAAATAAATAAATAACAGAGGGAGTCG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTAAACTAAAATAATAAAAATAAATAAATAACAGAGGGAGTCG  586

seq1  GAGAGGCTCTGCTATACCTATGGCCCTCCTGGCCACTCCATGAACCTGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTCTGCTATACCTATGGCCCTCCTGGCCACTCCATGAACCTGTT  636

seq1  GTCATTTCTTATTATTCATTATTTATGATTCCACACACAAATTCCACCCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCTTATTATTCATTATTTATGATTCCACACACAAATTCCACCCA  686

seq1  GGTGATTTGGCTCTTAGCAAAATGAATGTGAATTAATTCTGGTCATACAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTGGCTCTTAGCAAAATGAATGTGAATTAATTCTGGTCATACAT  736

seq1  TTTAATGAGACAACACTTCCGAAGCCCTCAGACGTTCCAGATGCAAAAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGAGACAACACTTCCGAAGCCCTCAGACGTTCCAGATGCAAAAGT  786

seq1  CACCTCTTTTGGTACTGACACCGGAATTTCTTCTCTTAACAAATCTTGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTTTTGGTACTGACACCGGAATTTCTTCTCTTAACAAATCTTGCT  836

seq1  TGTTTAGGCTTTTTTTCTTCTTCTTCCCCATTATGTGCCCTTCTACACAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGCTTTTTTTCTTCTTCTTCCCCATTATGTGCCCTTCTACACAG  886

seq1  AAGCAAGGTCAGAGGAGAGGAAGCGAAGACTGGGCCCTCAAGTGACCCAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGTCAGAGGAGAGGAAGCGAAGACTGGGCCCTCAAGTGACCCAT  936

seq1  GTTCTCACTCCAAAGTCATTGCCACACACCTCTCATTCCCCATTGTCCTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCACTCCAAAGTCATTGCCACACACCTCTCATTCCCCATTGTCCTT  986

seq1  AGGTTTTAACAAGTCTTATGGTGTGACATCGAGTTTGATCTTCCCACTAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTAACAAGTCTTATGGTGTGACATCGAGTTTGATCTTCCCACTAT  1036

seq1  GCCTCACTGCTCAAAATTACCCAGAATGATAGAATTC  1083
      |||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTGCTCAAAATTACCCAGAATGATAGAATTC  1073

seq1: chr10_91516613_91517629
seq2: B6Ng01-030M15.g_68_1068

seq1  GAATTCTGACTGAATCTGAAGGGCTAAACCACTGGAATGTTCTCCTAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTGAATCTGAAGGGCTAAACCACTGGAATGTTCTCCTAGTT  50

seq1  AAAGGCAAAAATAATTTAATCAGAGCAGAAGACAATGAACTTAAATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAAAATAATTTAATCAGAGCAGAAGACAATGAACTTAAATATAT  100

seq1  TTCTTAGTTGCCAAATGTTATGAGATGATCAAAAGGGAGGCTACTGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGTTGCCAAATGTTATGAGATGATCAAAAGGGAGGCTACTGCCAT  150

seq1  TCGCTGGACTTCGGTAGTGGGAAGTGACAAAGTTATATGGAAACTGGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGGACTTCGGTAGTGGGAAGTGACAAAGTTATATGGAAACTGGCGT  200

seq1  CTTTTTTTTTTTTTTTTTGTTCTCTCACCTTGCACTGAACACATATTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTTTTTTTTTTGTTCTCTCACCTTGCACTGAACACATATTACT  250

seq1  TCTCATAAAAGATTCATTTTCACAGCCTGCAGCTCTCTCCGAGTCAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAAAAGATTCATTTTCACAGCCTGCAGCTCTCTCCGAGTCAGCCT  300

seq1  CTCCCTATTCCACAACTAACATGTGATGCTCATTCTGACTTTTCTCAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTATTCCACAACTAACATGTGATGCTCATTCTGACTTTTCTCAACC  350

seq1  CCAAAAGTTATAAAATGCAGGCCTCAAGTATGAAATACTGAAATGAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTTATAAAATGCAGGCCTCAAGTATGAAATACTGAAATGAATCT  400

seq1  TGGTGGGATCCATGCAGCTGGGTCGAGACTGTGGAACTTCTCTGCAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGATCCATGCAGCTGGGTCGAGACTGTGGAACTTCTCTGCAGCTT  450

seq1  AAGAACAGGGAGACTATCCATTTCTAAGACTCCATATTAGCCTGGCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGGGAGACTATCCATTTCTAAGACTCCATATTAGCCTGGCAACT  500

seq1  GTATAGACATAGCAGGTGTTGGCTAGGAAGCTGTGTTTCCTCAGAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGACATAGCAGGTGTTGGCTAGGAAGCTGTGTTTCCTCAGAATTAA  550

seq1  TGACATGCCATTATGGTAGCAATTCTTCCAAGTCTCTAGAGTGTCTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCCATTATGGTAGCAATTCTTCCAAGTCTCTAGAGTGTCTGTAA  600

seq1  TTAAGAAGTTTAACTGTACTTAAAATGATATAAAGTGTCATTAGTCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGTTTAACTGTACTTAAAATGATATAAAGTGTCATTAGTCCCAT  650

seq1  GCTAAATCATTCCAGATTACTGATTTATTCTCCAGTGAAATCATCCAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATCATTCCAGATTACTGATTTATTCTCCAGTGAAATCATCCAGGT  700

seq1  AATTTTCTCTGCCTGAGTAATGTAAGGTTTCACACATGAACACCCCTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTCTGCCTGAGTAATGTAAGGTTTCACACATGAACACCCCTACT  750

seq1  GGATAAAGCTTTGGGTTTTCTTTGCAGTTAAAAATAATAGTGGGGCTGGC  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGATAAAGCTTTGGGTTTTCTTTGCAG-TAAAAATAATAGTGGGGCTGGC  799

seq1  GCTGGAGCTGGGGCTCAGGGGTAGAGCACTTGACAAGCATGCGCAAGTAT  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTGGAGCTGGGGCTCAGGGGTAGAGCACTTGAC-AGCATGCGCAAGTAT  848

seq1  CTGTCTTTCATTCCATAGACTGCCAAAACCAACATGTTTCTTAGAAGCTT  900
      |||||||||||| ||||||||||||||| ||||||||||||||| |||||
seq2  CTGTCTTTCATTTCATAGACTGCCAAAA-CAACATGTTTCTTAG-AGCTT  896

seq1  CACAGCAGTATCATGAAACTTCTGCCCATTGTCTTCCAGACAATGTCTTC  950
      | |||||||||||||||||||||| |||||||||| ||||| ||||||||
seq2  C-CAGCAGTATCATGAAACTTCTG-CCATTGTCTT-CAGAC-ATGTCTTC  942

seq1  GCAGAAGATCTTCAACTAATCTAGTGGTTTCCATTAACTTTGAAGTCTTT  1000
      |||||||||||   |||||||| ||||||  |||  |||||| |||||||
seq2  GCAGAAGATCT--CACTAATCTGGTGGTT--CAT--ACTTTG-AGTCTTT  985

seq1  CTATCTATATTTTTGTA  1017
      || ||||||||||||||
seq2  CT-TCTATATTTTTGTA  1001