BAC Information

Click to search

BAC

Clone NameB6Ng01-030M22
Chromosome10 (Build37)
Map Location 70,988,609 - 70,989,678
singlet/doubletsinglet
Overlap genenone
Upstream gene1200015N20Rik, Phyhipl, EG665429, Bicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860
Downstream geneLOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030M22.bB6Ng01-030M22.g
ACCDH860600DH860601
length1,0631,058
definitionDH860600|Mus musculus domesticus DNA, BAC clone: B6Ng01-030M22, 5' end.DH860601|Mus musculus domesticus DNA, BAC clone: B6Ng01-030M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgttttggaagtatttattgtgtcttatagattttgcataac
ttctcagctggtttcaaaatcttctgttctgttggaaggtagcaggaatt
actagtgaaaatagaaaccccacctttctcataccagttctgcagacagt
ctaacacctaactgtggcttctccacttaggcatcgttaatgtcgagatg
gaccagacttgtttctttcccatcagtaaaagacgctctctctctctctc
tctctccctgccccctctcttttctttttcttttttcttctttttattat
taggtattttcctcatttacatttccagtgctatcccaaaagtcccccat
accctcctcctcaacccctacccacccactccccctttttggccctggcg
ttcccctgtactggggcatataaagtttgcaagtccaatgggcctctttt
tccagtgatggccgactacgccatcttttgatacatatgcagctaaagac
aagagctcccgggtactggttagttcataatgttgttccacctatagggt
tgcagttccctttagctccttgggtaatttctctagctcctccattcctg
ccccctctcttaatttgaccattttaacattgtccttaaagttagtagat
tctcatgttccttcttcgaaaaaaagataaacttggcttaagccaatttg
tgactggagtattactcaacttttttccttgtgttacaattcaatcccac
cagataatatatcaaaaggacattatgtaatgattccttccttttttttt
cttaaagatttatttatttttgatgtaaatgagtatgctgtagtactcta
ctcatatatatatatacacatatatatgtgtatatatgtgtatatatata
tatatacacacacacacacacactgtagttgtgagcctttatgatgtggt
tgttgggattgattttaggacctctgctcgctctggtcaacctacttgtc
tggttggcccaattcctcaaaccctgctcactccgacccaaaatttttta
ttattataaataa
gaattccaggacagccagggctatacaaagaaatgctgtctcaaaaaaca
aacaaaaaaagttgtccagccttcatgggtctcttacagtcccgataatc
tggaatacttggggtgggggcacaagaaccttgactctacaagcatgggt
attccacaaagagactaggaatgaagaacctgaaggatgaaggacaaagg
atggtatggttgagggtaggtacctgagtctcttctgtgtattctctgtg
caacactgttagcagaccacactgtagtagagccagctcctctgtgacag
accttaagctgctcttccagaggaccagtgttcagttcctagcactcaat
gtcagacagctcacaactgcttgtaggtccagctctaggaaagctgatgc
cctctctccacaggtacccacatataagtggcatgtatacacacataggc
aatcactttgtaattattttatttatttacattctggtcattgccttcct
cctggtgcccccaccacagttcctcatctgattccaccttgcctctaaca
aggtgttccccctccaccctccactggaaatcccacttcacaaaactggt
tgccccagagacaagagagtccacacatagatgctagctaagtgaccctg
cccccaggtaattgtgattggtaaataaagatgccaacagtcattattag
ttggacagaggatggggtttaggtttccagggcttggggttggaggagga
aaatggagattgtgcaggagagcagggagaagaagaagccaccatgttta
aaggtcaagagaggaacaggagaagagctagggccttttggacaggagag
atgatgaagaacaaaatgtagtaacagacaagtgcgggtccactgtgatt
agctatcagagatttgtatttagaatacttataactatgatgctagtgct
gcgaccagcaattggtgtacctggtgattctaactagttgggtgggggtc
ctcctcccatgacgacccatttgggtctagaaagaagctctggaaagagc
tcaagggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_70988609_70989678
seq2: B6Ng01-030M22.b_47_1109

seq1  GAATTCAATGTTTTGGAAGTATTTATTGTGTCTTATAGATTTTGCATAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTTTGGAAGTATTTATTGTGTCTTATAGATTTTGCATAAC  50

seq1  TTCTCAGCTGGTTTCAAAATCTTCTGTTCTGTTGGAAGGTAGCAGGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCTGGTTTCAAAATCTTCTGTTCTGTTGGAAGGTAGCAGGAATT  100

seq1  ACTAGTGAAAATAGAAACCCCACCTTTCTCATACCAGTTCTGCAGACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGAAAATAGAAACCCCACCTTTCTCATACCAGTTCTGCAGACAGT  150

seq1  CTAACACCTAACTGTGGCTTCTCCACTTAGGCATCGTTAATGTCGAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACCTAACTGTGGCTTCTCCACTTAGGCATCGTTAATGTCGAGATG  200

seq1  GACCAGACTTGTTTCTTTCCCATCAGTAAAAGACGCTCTCTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGACTTGTTTCTTTCCCATCAGTAAAAGACGCTCTCTCTCTCTCTC  250

seq1  TCTCTCCCTGCCCCCTCTCTTTTCTTTTTCTTTTTTCTTCTTTTTATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCTGCCCCCTCTCTTTTCTTTTTCTTTTTTCTTCTTTTTATTAT  300

seq1  TAGGTATTTTCCTCATTTACATTTCCAGTGCTATCCCAAAAGTCCCCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATTTTCCTCATTTACATTTCCAGTGCTATCCCAAAAGTCCCCCAT  350

seq1  ACCCTCCTCCTCAACCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTCCTCAACCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCG  400

seq1  TTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTTTT  450

seq1  TCCAGTGATGGCCGACTACGCCATCTTTTGATACATATGCAGCTAAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGATGGCCGACTACGCCATCTTTTGATACATATGCAGCTAAAGAC  500

seq1  AAGAGCTCCCGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTCCCGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGT  550

seq1  TGCAGTTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTCCTG  600

seq1  CCCCCTCTCTTAATTTGACCATTTTAACATTGTCCTTAAAGTTAGTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTCTTAATTTGACCATTTTAACATTGTCCTTAAAGTTAGTAGAT  650

seq1  TCTCATGTTCCTTCTTCGAAAAAAAGATAAACTTGGCTTAAGCCAATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTTCCTTCTTCGAAAAAAAGATAAACTTGGCTTAAGCCAATTTG  700

seq1  TGACTGGAGTATTACTCAACTTTTTTCCTTGTGTTACAATTCAATCCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGAGTATTACTCAACTTTTTTCCTTGTGTTACAATTCAATCCCAC  750

seq1  CAGATAATATATCAAAAGGACATTATGTAATGATTCCTTCCTTTTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATATATCAAAAGGACATTATGTAATGATTCCTTCCTTTTTTTTT  800

seq1  CTTAAAGATTTATTTATTTTTGATGTAAATGAGTATGCTGTAGTACTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGATTTATTTATTTTTGATGTAAATGAGTATGCTGTAGTACTCTA  850

seq1  CTCATATATATATATACACATATATATGTGTATATATGTGTATATATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATATATATATACACATATATATGTGTATATATGTGTATATATATA  900

seq1  TATATACACACACACACACACACTGTAGTTGTGAGCCTTTATGAATGTGG  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATATACACACACACACACACACTGTAGTTGTGAGCCTTTATG-ATGTGG  949

seq1  TTGTTGGGAATTGATTTTAGGACCTCTGCTCGCTCTGGTCAACTCTACTT  1000
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  TTGTTGGG-ATTGATTTTAGGACCTCTGCTCGCTCTGGTCAAC-CTACTT  997

seq1  GCTCTGGTTGGCCCAATTCACTCAATCCCTGCTCACTCCGACTCAAAGAT  1050
      | ||||||||||||||||| ||||| |||||||||||||||| |||| ||
seq2  G-TCTGGTTGGCCCAATTC-CTCAAACCCTGCTCACTCCGACCCAAA-AT  1044

seq1  TTATTTATTATTATAAATAA  1070
      || |||||||||||||||||
seq2  TT-TTTATTATTATAAATAA  1063