BAC Information

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BAC

Clone NameB6Ng01-032M15
Chromosome13 (Build37)10 (Build37)
Map Location 3,167,815 - 3,167,85758,314,587 - 58,315,103
singlet/doubletsingletsinglet
Overlap geneSpeer6-ps1
Upstream geneLOC667375, LOC544917, LOC236294
Downstream geneLOC674228, LOC667411, LOC100039182, 2810429I04Rik, Gdi2, Asb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032M15.bB6Ng01-032M15.g
ACCDH862022DH862023
length783514
definitionDH862022|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M15, 5' end.DH862023|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(3,167,815 - 3,167,857)(58,314,587 - 58,315,103)
sequence
gaattctctctgaggtatcttgaatggccaagaagcacctaaagaaatgc
tcaacatccctagtcatcagggaaatacaaatcaaaacgaccctgagatt
ctacctcacaccaatcacaatgactaagatcaaaaactcaggtgacagca
gatctggtgaggatgtgtagaaagaggaacactcctccattgttggtggg
attataaactggtaagccaatttggaaaacaatcttgcagtttctcagaa
aattggaaatagttctgactgaagatccagctataccactcctgggcata
tacccagaagctgctccaacatttaataaggacacatgatccacaatgtt
catagcagccttatttataatagccagaagctggacacaactcacatgtc
cctcaacagaggaatggatacggaaaatgtggtacatttacacaacggag
tactactccactattaaaaacaatgacttcatgaaatttgcaggcaaatg
gatggaactagaaaatatcatcctgactgaagtaactcagacacaaaagg
acacacatggtttgtactcactgataagttgatattatcccaaaagctca
gaatacccatgatacaactcacagagcatatgaagcttaacaagaatgaa
taccaaagtgtggatgcttcagtcatactcagaatgtgaaacaaaataat
catgggaggtagagggagggaagaacctgagaggagaggggaagttttga
tggggattgcattgaatctttagattgctttca
gaattcacaagttctgctgcatcaagttgttcagggtttgccaaggccca
ccggtgaggtgggtgaaaggtagaaagtcgaggctgataggtagaaagag
ggaggtgacaatggcctcctaaagggacagaaagtatagcttctatctga
aatgttagaaagaaccgtaaaacatcttgtggctcaccagcctgcctggc
gggtgggaactacatgtctgtctgtttgatttctctttgttggggttgag
ctttgtccaggtgatatcgccatgtgacccaagggtgggcgcttggatat
gcgtctgcgacgtatcttcctggttgctcaaatttccttttattaatatt
taagaggtaattacttttctatatatcagttggtagaagggtaatccgac
aaggcatgttatcaagaaaatggttcttcatctttccctgggagtaaact
tggttgttagaagttcataacatgcccatttgaaagactggacgaaactg
gattgttatgttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_3167815_3167857
seq2: B6Ng01-032M15.b_782_825 (reverse)

seq1  TGAAAGCAGTCTATAGATTCAATGCAATCCCCATCAAAA-TTCC  43
      |||||||| |||| ||||||||||||||||||||||||| ||||
seq2  TGAAAGCAATCTAAAGATTCAATGCAATCCCCATCAAAACTTCC  44

seq1: chr10_58314587_58315103
seq2: B6Ng01-032M15.g_68_581

seq1  GAATTCAGAAGTTCTGCTGCATCAAGTTGTTCAGGGTTTGCCAAGGCCCA  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAGTTCTGCTGCATCAAGTTGTTCAGGGTTTGCCAAGGCCCA  50

seq1  CCGGTGAGGTGGGTGAAAGGTAGAAAGTCGAGGCTGATAGGTAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCGGTGAGGTGGGTGAAAGGTAGAAAGTCGAGGCTGATAGGTAGAAAGAG  100

seq1  GGAGGTGACAATGGCCTCCTAAAGGGACAGAGAGTATAGCTTCTATCTGA  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGAGGTGACAATGGCCTCCTAAAGGGACAGAAAGTATAGCTTCTATCTGA  150

seq1  AATGTTAGAAAGAACCGTAAAACATCTTGTGGCTCACCAGCCTGCCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAGAAAGAACCGTAAAACATCTTGTGGCTCACCAGCCTGCCTGGC  200

seq1  GGGTGGGAACTACATGTCTGTCTGTTTGATTTCTCTTTGTTGGGGTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAACTACATGTCTGTCTGTTTGATTTCTCTTTGTTGGGGTTGAG  250

seq1  CTTTGTCCTGGTGATGTCACAGTGTGACCCAAGGGTGGGCGCTTGGATAT  300
      |||||||| |||||| || |  ||||||||||||||||||||||||||||
seq2  CTTTGTCCAGGTGATATCGCCATGTGACCCAAGGGTGGGCGCTTGGATAT  300

seq1  GCATCTGCGACGTATCTTCCTGGTTGCTCAAATTTCCTTTTATTAGTATT  350
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCGTCTGCGACGTATCTTCCTGGTTGCTCAAATTTCCTTTTATTAATATT  350

seq1  TAAGAGGTAATTACTTTTCTATATATCAGTTGGTAGAAGGGTAATCCGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGTAATTACTTTTCTATATATCAGTTGGTAGAAGGGTAATCCGAC  400

seq1  AAGGCATGTTATCAGGCAAATGGCTCTTCATCTTTCCCTGGGAGTAAACT  450
      |||||||||||||| | |||||| ||||||||||||||||||||||||||
seq2  AAGGCATGTTATCAAGAAAATGGTTCTTCATCTTTCCCTGGGAGTAAACT  450

seq1  TGGTTGTAAGAAGTTCAGAGCATGCGCATTTAAAAGACAACAGGAAACTG  500
      ||||||| ||||||||| | ||||| ||||| ||||||   | |||||||
seq2  TGGTTGTTAGAAGTTCATAACATGCCCATTTGAAAGACTGGACGAAACTG  500

seq1  GATTGTTAGGGTGTTGG  517
      ||||||||   ||||||
seq2  GATTGTTA---TGTTGG  514