BAC Information

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BAC

Clone NameB6Ng01-033F16
Chromosome10 (Build37)
Map Location 99,094,569 - 99,095,555
singlet/doubletsinglet
Overlap genenone
Upstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502
Downstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033F16.bB6Ng01-033F16.g
ACCDH862425DH862426
length1,133986
definitionDH862425|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F16, 5' end.DH862426|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaagttccctctccccactgttgggcatttcatctgaagtgc
ctctctttgagtcttgaaattcttttacctcccaggtctctggtacattg
tagagggtcaccacacttctcttccctcaaggttacatatttccattcac
tcccttggggcttcaatcctgcctcctttccccataccagatcatgtttc
ccttttctccttcccctcccctctccaccaaggtccctccctccctctgc
ctcctgtgattgttttgttctccctcccaagtggaattgaaacatcctca
cttaggcccttctgcttgttaaccttcttgagttctgtggattctgtact
ctttttactaatatccacttactagtgagtacatacatgcccttttggat
ctgagatacctcactcaggatgatatttactagctctatccattttcctg
caaaactcgggatgtccacattcttaatagctgagcagtattccattgtg
taaatgaaccacattttctgtatccattcttccactgtggaacatctggg
ttgtttccaggttctggctatcataaataaggcttctgtgtacatagtgg
aacacatgcccttgtttatttaacaatataataaaattaggtgggcatta
ttttctggacaagacagtattttcttcttcaactgaatggaagaatttct
atgactatttattgtctcaaatggctaatctcccaccccccccatttatt
tccactttaaggattgccttctagataatccatatacaaaaatgtcttca
tacactttacatactctctaaatttttaaacaatgttacttataaagcat
catagtgtcacagtgcaatcaacaattcttccagtcattatgagactgtc
acattgattgtgtcatgtttctgtagtgctgattactgaaaatatagaca
agttgctttgtttctcttagtaagagtatctcatttaaaaaaaagctttc
taaaataatactacaaatgttcatgtgcatattggatggctgtaaaaatg
aaattacggtggaaccagatgtcttaacaactagttaattgaagaatagg
ccatgaactagtccaggtctgcttggaatgtta
gaattcaattggttacctaagggcttagggccagggagacggcaaaatat
ttacgagaccgtttcttctgttaaaaagcctaagaaatataggctcattg
agctgttagtttttgcagcaaagatggatgtgcgcgactctccccatagc
tgaggatagtctaggcctttgcaaagcaactggccatattaggagagaag
ctggtggctgagaatagacaggctaatcctttaacaaaggtgatgcccga
gactctaataccctaagagaagctttttttttttttttttaaaggaagaa
gcagccaattacaagcattttacaatgtgagggtcctatgaaatgtttag
tttaaattggctgtagtttaagcagtgtctcccccccacccccactctgc
ttttaaaagaaagaagcaaactcaagaaaccctggagaaaggattaagtt
taagaaggtcccataccttctacagctaaggactgaggcaaaggaaattg
tggtttctgaggatgtcctaaggcacaaacctttgactcatcaaataaag
attcaattgtactcacaaaggtcgtgttccctcacataagagggagtggc
atatttgtaattactgccaactacaagacctgaaaaaataaaattagcga
ttactcgttagagtatacaaatagcttctaccctccagtggtcccagatt
tcaggggctaggcggcggggaggagttgaagaaaatatgtcttctagaaa
agttctgggctaaataaaagagaccacataaaacaccagtgcttatgcag
aataaacttgtttcacttctgcatattcttatttttgcagattgtcacta
gtttcgtttgtagtgctccaattttttctctccataccttccatgtaaac
tggggagctcacagaaagttatgtggtcagtactataaagtaaggatgac
atttctgactgctgaggccttctcttctgttttatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99094569_99095555
seq2: B6Ng01-033F16.g_70_1055

seq1  GAATTCAATTGGTTACCTAAGGGCTTAGGGCCAGGGAGACGGCAAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTGGTTACCTAAGGGCTTAGGGCCAGGGAGACGGCAAAATAT  50

seq1  TTACGAGACCGTTTCTTCTGTTAAAAAGCCTAAGAAATATAGGCTCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAGACCGTTTCTTCTGTTAAAAAGCCTAAGAAATATAGGCTCATTG  100

seq1  AGCTGTTAGTTTTTGCAGCAAAGATGGATGTGCGCGACTCTCCCCATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTAGTTTTTGCAGCAAAGATGGATGTGCGCGACTCTCCCCATAGC  150

seq1  TGAGGATAGTCTAGGCCTTTGCAAAGCAACTGGCCATATTAGGAGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATAGTCTAGGCCTTTGCAAAGCAACTGGCCATATTAGGAGAGAAG  200

seq1  CTGGTGGCTGAGAATAGACAGGCTAATCCTTTAACAAAGGTGATGCCCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGCTGAGAATAGACAGGCTAATCCTTTAACAAAGGTGATGCCCGA  250

seq1  GACTCTAATACCCTAAGAGAAGCTTTTTTTTTTTTTTTTTAAAGGAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAATACCCTAAGAGAAGCTTTTTTTTTTTTTTTTTAAAGGAAGAA  300

seq1  GCAGCCAATTACAAGCATTTTACAATGTGAGGGTCCTATGAAATGTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAATTACAAGCATTTTACAATGTGAGGGTCCTATGAAATGTTTAG  350

seq1  TTTAAATTGGCTGTAGTTTAAGCAGTGTCTCCCCCCCACCCCCACTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTGGCTGTAGTTTAAGCAGTGTCTCCCCCCCACCCCCACTCTGC  400

seq1  TTTTAAAAGAAAGAAGCAAACTCAAGAAACCCTGGAGAAAGGATTAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAGAAAGAAGCAAACTCAAGAAACCCTGGAGAAAGGATTAAGTT  450

seq1  TAAGAAGGTCCCATACCTTCTACAGCTAAGGACTGAGGCAAAGGAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGGTCCCATACCTTCTACAGCTAAGGACTGAGGCAAAGGAAATTG  500

seq1  TGGTTTCTGAGGATGTCCTAAGGCACAAACCTTTGACTCATCAAATAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCTGAGGATGTCCTAAGGCACAAACCTTTGACTCATCAAATAAAG  550

seq1  ATTCAATTGTACTCACAAAGGTCGTGTTCCCTCACATAAGAGGGAGTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTGTACTCACAAAGGTCGTGTTCCCTCACATAAGAGGGAGTGGC  600

seq1  ATATTTGTAATTACTGCCAACTACAAGACCTGAAAAAATAAAATTAGCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTAATTACTGCCAACTACAAGACCTGAAAAAATAAAATTAGCGA  650

seq1  TTACTCGTTAGAGTATACAAATAGCTTCTACCCTCCAGTGGTCCCAGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCGTTAGAGTATACAAATAGCTTCTACCCTCCAGTGGTCCCAGATT  700

seq1  TCAGGGGCTAGGCGGCGGGGAGGAGTTGAAG-AAATATGTCTTCTAG-AA  748
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  TCAGGGGCTAGGCGGCGGGGAGGAGTTGAAGAAAATATGTCTTCTAGAAA  750

seq1  AGTTCTGGGCTAAATAAAAGAGACCACATAAAACACCAGTGCTTATGCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGGCTAAATAAAAGAGACCACATAAAACACCAGTGCTTATGCAG  800

seq1  AATAAACTTGTTTCACTTCTGCATATTTTTATTTTTGCAGATTTGTCACT  848
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  AATAAACTTGTTTCACTTCTGCATATTCTTATTTTTGCAGA-TTGTCACT  849

seq1  AGTTTCGTTTGTAGTGCTTCCCATTTTTTTCTCTCCATACCTTCCATGTA  898
      ||||||||||||||||||  ||| ||||||||||||||||||||||||||
seq2  AGTTTCGTTTGTAGTGCT--CCAATTTTTTCTCTCCATACCTTCCATGTA  897

seq1  AACTTGGGAGCTCCACAGAAAGTTATGTGGTCAGTACTAT-AAGTAA-GA  946
      |||| ||||||| ||||||||||||||||||||||||||| |||||| ||
seq2  AACTGGGGAGCT-CACAGAAAGTTATGTGGTCAGTACTATAAAGTAAGGA  946

seq1  TGACATTTCTGACTGCTGAGGCCTTCTTCTTCTGTTTTATC  987
      |||||||||||||||||||||||||| ||||||||||||||
seq2  TGACATTTCTGACTGCTGAGGCCTTC-TCTTCTGTTTTATC  986