BAC Information

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BAC

Clone NameB6Ng01-034G20
Chromosome10 (Build37)
Map Location 76,290,630 - 76,291,327
singlet/doubletsinglet
Overlap genePcbp3
Upstream geneGstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1
Downstream geneLOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034G20.bB6Ng01-034G20.g
ACCDH863186DH863187
length691654
definitionDH863186|Mus musculus domesticus DNA, BAC clone: B6Ng01-034G20, 5' end.DH863187|Mus musculus domesticus DNA, BAC clone: B6Ng01-034G20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaatgccgatttgagaaaaactgcccttgcttctagaattctg
agggccttggacagggacctgggagatgctgctgtttgggtgctttctcc
tccagacacccattttagtgttggcacatcactgtcttcagaatgcttgt
cactaaacctggaacactagtgagtcacttttgagggggtctctagatga
ggcctcctctggggaatggcacttgtgatgccggggacaagggttccctg
ggctggattctctctcagaggtttcactgtgactcttgggatgttgcata
gttccggcaggacacctgagcagggccctgtggtgttcaccgcttgtggc
ttcagcttcagcttccttctctgtacttcactcactcacttaaaggttcc
agtcccctcccacagcgcctgttctcagtgtgggaacaagtaggctgtgt
gcttttaatcgccacatcgtgccagtgtgattcagggtggggatgggatg
aagacgaatacaagctaatgctgcaatggttatagaggatctctttgtgt
aggattggagagcagaccagggttttgtgaatgaaggtcttgctatgtat
tgtagatagccttgaacttatgatccttctgcattggctctcttagtgcg
aaatgacaggtgaaaaggcatatctgactctactttgttta
gaattcaaggctctttcccactttctcttctattagatcctggttttacg
ttaaggtccttgatccacttggacttgaacttcgttcaaggagataaatg
tggatttattttcattctcctactttcagaccaccagttagaccagcaat
gatattgaagatgctttctttttccacggtatgtttttggctttcttttg
tcaggtgtccataggtgtggaggtttacttctgagtctttgattctgttc
tgttgaccaacctgcctggttctgtcccaaagccatgcagtttttactca
ctgttgctctgtggtacagcttgcaagtacacccttgtagtacaggggtg
gggattcccctgggagttcttttattgttgagaattgttttggctctcct
gggtattttgtttttccatatgaagttgaggattgctctttccatgtctg
tgaagaattgtgttggaattttgatggggatttgcattgaatctgtagct
tgctttggtaagatgaccatttttcactgtttaatcctacatatcatgga
aatcctatctatcatgggagatctctccaacttctgaggtctccttcgat
ttctttttttcacagattgaagttcttgtcacacagatcttcacttgctt
gatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76290630_76291327
seq2: B6Ng01-034G20.b_44_734 (reverse)

seq1  TAAACAAAGTAAGAGTCAGATATGGCTTTTTCCACCTGTCATTTCCGCAC  50
      |||||||||| ||||||||||||| |||||  |||||||||||| |||||
seq2  TAAACAAAGT-AGAGTCAGATATGCCTTTT--CACCTGTCATTT-CGCAC  46

seq1  TAAGAGAGCCAATGCAGGAGGATCATAAGTTCAAGGCTATCCTACAATAC  100
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TAAGAGAGCCAATGCAGAAGGATCATAAGTTCAAGGCTAT-CTACAATAC  95

seq1  ATAGCAAGACCTTCATTCACAAAACCCTGGGTCTGCTCTCCAATCCTACA  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAGCAAGACCTTCATTCACAAAACCCT-GGTCTGCTCTCCAATCCTACA  144

seq1  CAAAGAGATCCTCTATTAACCATTGCAGCATTAGCTTGTATTCGTCTTCA  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAAAGAGATCCTCTA-TAACCATTGCAGCATTAGCTTGTATTCGTCTTCA  193

seq1  TCCCATCCCCACCCTGAATCACACTGGCACGATGTGGCGATTAAAAGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCCCACCCTGAATCACACTGGCACGATGTGGCGATTAAAAGCAC  243

seq1  ACAGCCTACTTGTTCCCACACTGAGAACAGGCGCTGTGGGAGGGGACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTACTTGTTCCCACACTGAGAACAGGCGCTGTGGGAGGGGACTGG  293

seq1  AACCTTTAAGTGAGTGAGTGAAGTACAGAGAAGGAAGCTGAAGCTGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTAAGTGAGTGAGTGAAGTACAGAGAAGGAAGCTGAAGCTGAAGC  343

seq1  CACAAGCGGTGAACACCACAGGGCCCTGCTCAGGTGTCCTGCCGGAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCGGTGAACACCACAGGGCCCTGCTCAGGTGTCCTGCCGGAACTA  393

seq1  TGCAACATCCCAAGAGTCACAGTGAAACCTCTGAGAGAGAATCCAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACATCCCAAGAGTCACAGTGAAACCTCTGAGAGAGAATCCAGCCCA  443

seq1  GGGAACCCTTGTCCCCGGCATCACAAGTGCCATTCCCCAGAGGAGGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACCCTTGTCCCCGGCATCACAAGTGCCATTCCCCAGAGGAGGCCTC  493

seq1  ATCTAGAGACCCCCTCAAAAGTGACTCACTAGTGTTCCAGGTTTAGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAGACCCCCTCAAAAGTGACTCACTAGTGTTCCAGGTTTAGTGAC  543

seq1  AAGCATTCTGAAGACAGTGATGTGCCAACACTAAAATGGGTGTCTGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTCTGAAGACAGTGATGTGCCAACACTAAAATGGGTGTCTGGAGG  593

seq1  AGAAAGCACCCAAACAGCAGCATCTCCCAGGTCCCTGTCCAAGGCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCACCCAAACAGCAGCATCTCCCAGGTCCCTGTCCAAGGCCCTCA  643

seq1  GAATTCTAGAAGCAAGGGCAGTTTTTCTCAAATCGGCATTGAGAATTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAGCAAGGGCAGTTTTTCTCAAATCGGCATTGAGAATTC  691