BAC Information

Click to search

BAC

Clone NameB6Ng01-034L18
Chromosome10 (Build37)13 (Build37)
Map Location 104,053,903 - 104,054,36374,874,664 - 74,875,249
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L18.bB6Ng01-034L18.g
ACCDH863401DH863402
length747586
definitionDH863401|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L18, 5' end.DH863402|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(74,874,664 - 74,875,249)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaattcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaagagttacagaaacaaagtatgagctgaaat
gaattccttacttagaggccctatattcatataaattaccattctagggt
tcttcatgacttcagcatgtgagtgcgagaatacacaatttagctcatga
atgactgagaatacattttgtcaaatcagaagaattaatctttccttctt
aatttcttccatttttgtttcagaaaaatgaagggatcacacaacctctt
ccagactctcctgtgagtttgtatacatgtcttttaagatctgtatcaac
actgttctttgtttggggacatagaactaccagtaccaaactgggtttgg
tggaacagtcctgtaatccagttatgtagaaagctgagtttaaggccagt
ctggataatttataccctttctcaaattaaaaagtaaaccggggatatat
ctcagatatctgggtggcaaactacttacttgcctagtgtgcatgaggct
ctggattcaatctctaatctctaaaacgcaaatgaaaagaatcctatgaa
agcatagtagaaggcatgggcctatttctctgtccttggccatatataat
atggaggtggagataataggatagaaggatatagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-034L18.b_45_515 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGTTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCTTCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr13_74874664_74875249
seq2: B6Ng01-034L18.g_70_655 (reverse)

seq1  TACTATATCCTTCTATCCTATTATCTCCACCTCCATATTATATATGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATATCCTTCTATCCTATTATCTCCACCTCCATATTATATATGGCCA  50

seq1  AGGACAGAGAAATAGGCCCATGCCTTCTACTATGCTTTCATAGGATTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGAGAAATAGGCCCATGCCTTCTACTATGCTTTCATAGGATTCTT  100

seq1  TTCATTTGCGTTTTAGAGATTAGAGATTGAATCCAGAGCCTCATGCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGCGTTTTAGAGATTAGAGATTGAATCCAGAGCCTCATGCACAC  150

seq1  TAGGCAAGTAAGTAGTTTGCCACCCAGATATCTGAGATATATCCCCGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAGTAAGTAGTTTGCCACCCAGATATCTGAGATATATCCCCGGTT  200

seq1  TACTTTTTAATTTGAGAAAGGGTATAAATTATCCAGACTGGCCTTAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTAATTTGAGAAAGGGTATAAATTATCCAGACTGGCCTTAAACT  250

seq1  CAGCTTTCTACATAACTGGATTACAGGACTGTTCCACCAAACCCAGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTCTACATAACTGGATTACAGGACTGTTCCACCAAACCCAGTTTG  300

seq1  GTACTGGTAGTTCTATGTCCCCAAACAAAGAACAGTGTTGATACAGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGTAGTTCTATGTCCCCAAACAAAGAACAGTGTTGATACAGATCT  350

seq1  TAAAAGACATGTATACAAACTCACAGGAGAGTCTGGAAGAGGTTGTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGACATGTATACAAACTCACAGGAGAGTCTGGAAGAGGTTGTGTGA  400

seq1  TCCCTTCATTTTTCTGAAACAAAAATGGAAGAAATTAAGAAGGAAAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCATTTTTCTGAAACAAAAATGGAAGAAATTAAGAAGGAAAGATT  450

seq1  AATTCTTCTGATTTGACAAAATGTATTCTCAGTCATTCATGAGCTAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCTGATTTGACAAAATGTATTCTCAGTCATTCATGAGCTAAATT  500

seq1  GTGTATTCTCGCACTCACATGCTGAAGTCATGAAGAACCCTAGAATGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTCTCGCACTCACATGCTGAAGTCATGAAGAACCCTAGAATGGTA  550

seq1  ATTTATATGAATATAGGGCCTCTATGTAAGGAATTC  586
      |||||||||||||||||||||||| |||||||||||
seq2  ATTTATATGAATATAGGGCCTCTAAGTAAGGAATTC  586