BAC Information

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BAC

Clone NameB6Ng01-035B14
Chromosome10 (Build37)10 (Build37)
Map Location 104,053,903 - 104,054,363104,053,903 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035B14.bB6Ng01-035B14.g
ACCDH863661DH863662
length839813
definitionDH863661|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B14, 5' end.DH863662|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(104,053,903 - 104,054,363)
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ctcaacattcttaatcatcagagaaatgcaaatcaaaacaatcctgggat
tccatctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
aaatgctggagaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
atatccagaagatgtcccaaccggtaagaaggacagatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacctagatac
ccctcaacagaggaatggatacaaaaatatggtacatttacacaatggag
tactactcagctattaaaaagaatgaatttttgaaattcctaggcaaatg
gttggacctggtgggcatcatcctaagtgaggtaacacaatcacaaaaga
actcatatgatatgtactcactgataagtggatattaacccagaaactta
gtatacccagatataagatacaatttgcagaacacatgaaactgaagaag
aacgaagaccaaagtgtggacacttttcccccttcttagaattggaaaca
atcatccatggaaaggagttacagagacaaagttcagagttgtgacaaaa
ggatggaccatctagagactgccatatccaaagatcatcccatatttagc
ttcaaacgatgacacattgcatacactagcaagcatttg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagggaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaacactcttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgcttatccagggatccacctcataatcag
catcaaacgctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-035B14.b_43_510 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||| ||||| ||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCATATTTT-TGTA  49

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||| |||| |||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGTATCTAGGTTCTTTCCAGCTTCTGGCTATT  99

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATCTGTCCTTCTTACCGGT  149

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||| ||||||||||  |||||||||| ||||||||||| ||||||||| 
seq2  TGGGACATCTTCTGG--ATATGCCCAGGAGAGGTATTGCGGGATCCTCCA  197

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||| ||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGT  247

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  297

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||| ||||||| ||||||||||||||||||||||||||| ||
seq2  TCCACATCCTCTCCAGCATTTGCTGTCACCTGAATTTTTGATCTTAGACA  347

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||||||||||||| ||||||| |||| ||||||||||||||||||| 
seq2  TTCTGACTGGTGTGAGATGGAATCCCAGGATTGTTTTGATTTGCATTTCT  397

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      |||||||||||| ||||||| |||||||||||||||||||| ||||||||
seq2  CTGATGATTAAGAATGTTGAGCATTTTTTCAGGTGCTTCTCAGCCATTCG  447

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  468

seq1: chr10_104053903_104054363
seq2: B6Ng01-035B14.g_67_537 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGTTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCTTCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471