BAC Information

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BAC

Clone NameB6Ng01-035E01
Chromosome10 (Build37)12 (Build37)
Map Location 104,053,903 - 104,054,36338,650,248 - 38,650,898
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035E01.bB6Ng01-035E01.g
ACCDH863771DH863772
length592653
definitionDH863771|Mus musculus domesticus DNA, BAC clone: B6Ng01-035E01, 5' end.DH863772|Mus musculus domesticus DNA, BAC clone: B6Ng01-035E01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(38,650,248 - 38,650,898)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagc
gaattcaatttctattacccacatacacaaacacacacacacacacagag
agagtgagagagagagagagagagagagagagagagagtggctccacgtt
ttaaacatttatttttatagctgaagaagacagaagacttccttgtacat
gccagctagacagtcaattcactgagcccaaagtttaaagagaaatcttg
ttgcaaaatatcatgtaaggtctgaggaaatggatccgtctaaaagtgcc
tcccatgcatacatgaagagctgagtttagatctccagcgctatggtaaa
agctgaatgtgcatgcctgcaacatcccaagctccttggttatcttagct
gtttcaggatttactatgccacaactgacctaacttatttaagtagaaat
cttgttttacatagtgaaagttcttggggagaaactagttaatagttcag
cacttaaagcagagtgtacagtccacattgtaaggtaagttcagtaagat
aaataataaataaggaccagcaaagtgactctgtggttaaaacaaatttg
cagccaagtctgacaacccagttcaatctacagaaatcatatggtagaat
aatatgggcctcctgaagtcattcaaagttatcctttgtatgaattcccc
cta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-035E01.b_44_514 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||||||||||||||||||| |||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTAGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCTGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      ||||||||||||||| |||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAGTTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCACTCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAAGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr12_38650248_38650898
seq2: B6Ng01-035E01.g_68_720 (reverse)

seq1  TAGGGGG-AGTCATACAAAGGATAACTTTGAATGACTTCAGGAGGCCCAT  49
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGAATTCATACAAAGGATAACTTTGAATGACTTCAGGAGGCCCAT  50

seq1  ATTATTCTACCATATGATTTCTGTAGATTGAACTGGGTTGTCAGACTTGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTACCATATGATTTCTGTAGATTGAACTGGGTTGTCAGACTTGG  100

seq1  CTGC-AATTTGTTTTAACCACAGAGTCACTTTGCTGGTCCTTATTTATTA  148
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATTTGTTTTAACCACAGAGTCACTTTGCTGGTCCTTATTTATTA  150

seq1  TTTATCTTACTGAACTTACCTTACAATGTGGACTGTACACTCTGCTTTAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTACTGAACTTACCTTACAATGTGGACTGTACACTCTGCTTTAA  200

seq1  GTGCTGAACTATTAACTAGTTTCTCCCCAAGAACTTTCACTATGTAAAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAACTATTAACTAGTTTCTCCCCAAGAACTTTCACTATGTAAAAC  250

seq1  AAGATTTCTACTTAAATAAGTTAGGTCAGTTGTGGCATAGTAAATCCTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCTACTTAAATAAGTTAGGTCAGTTGTGGCATAGTAAATCCTGA  300

seq1  AACAGCTAAGATAACCAAGGAGCTTGGGATGTTGCAGGCATGCACATTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTAAGATAACCAAGGAGCTTGGGATGTTGCAGGCATGCACATTCA  350

seq1  GCTTTTACCATAGCGCTGGAGATCTAAACTCAGCTCTTCATGTATGCATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTACCATAGCGCTGGAGATCTAAACTCAGCTCTTCATGTATGCATG  400

seq1  GGAGGCACTTTTAGACGGATCCATTTCCTCAGACCTTACATGATATTTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACTTTTAGACGGATCCATTTCCTCAGACCTTACATGATATTTTG  450

seq1  CAACAAGATTTCTCTTTAAACTTTGGGCTCAGTGAATTGACTGTCTAGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGATTTCTCTTTAAACTTTGGGCTCAGTGAATTGACTGTCTAGCT  500

seq1  GGCATGTACAAGGAAGTCTTCTGTCTTCTTCAGCTATAAAAATAAATGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTACAAGGAAGTCTTCTGTCTTCTTCAGCTATAAAAATAAATGTT  550

seq1  TAAAACGTGGAGCCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACGTGGAGCCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAC  600

seq1  TCTCTCTGTGTGTGTGTGTGTGTTTGTGTATGTGGGTAATAGAAATTGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGTGTGTGTGTGTGTTTGTGTATGTGGGTAATAGAAATTGAA  650

seq1  TTC  651
      |||
seq2  TTC  653