BAC Information

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BAC

Clone NameB6Ng01-035O04
Chromosome10 (Build37)9 (Build37)
Map Location 14,477,481 - 14,478,0755,944,412 - 5,944,503
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAig1, EG666859, Hivep2, Gpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904
Downstream geneNmbr, LOC666917, LOC637043, LOC100039492
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035O04.bB6Ng01-035O04.g
ACCDH864234DH864235
length663522
definitionDH864234|Mus musculus domesticus DNA, BAC clone: B6Ng01-035O04, 5' end.DH864235|Mus musculus domesticus DNA, BAC clone: B6Ng01-035O04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,477,481 - 14,478,075)(5,944,412 - 5,944,503)
sequence
gaattctcatatacatttctttcaataaataaatactatttctagttctg
tacattatacttttgtaaaataattaacattacatgatttgaaatatgtc
tctaaaattttacttccaatgctaagtttgtcttttaacattcaatttca
ttgtgcaaagtaaaattttaaagatcagaattttgagaggtcccaaaatt
tccagatcaacatattctgttttattaactttttacttttaatgttttcc
cttgcaataaaattgtatcacgtacaccctctagtcactcctctcaggtt
gaaagcctctttttattttattatacttactatatatgtctctgcacatg
tataaaatatataatgtgctgaatccatttgttttgtttgtgtgtatatg
gtttcaaggctgaccactctccagtggaaaatcaataaaggtgctcaact
ctgatagaggcacattgtgtctctctcagtagtcattggttgctgtagtt
ctttgtctagggacaagactctgatagtttccctttccattaatattatc
atttctattgatactgccattgttgtagttattatttgtgcagccttttt
aaggaaagactgcttacagaagacttcctgatatctggttctaaaatctt
cagaccctccttg
tttgtttagctctgtaccccatttttaatagggttatttggttttctgga
gtctaacttcttgaattctttgtatatattgggtattagccctctattaa
agatcttttcccaatgtgttggttgcctttttgtcttattgagagtgtcc
tttgccttacaggagctttgcaattttatgaggtcccatttgttgagtct
tgatcttacagcacaagccattggtggatgctcacagccatccattggat
agaacttaagagtccccaatgaaggagctagagaaagtacccaaggagct
gaagggatttgcagcaccataagaggaacatcgatatgaactaaccagta
cccccagatctccctgggagtaaaccaccaatcaaagaaaatacatggtt
ggactggtggctccagctgcatacatagcagaggattgcctagtgagtca
tcaatgggaggaaaggcccttagtcctgtgaagattctatgccccagtat
agggaaatgtcagggcccagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14477481_14478075
seq2: B6Ng01-035O04.b_44_638 (reverse)

seq1  GGCTGCACAAATAATAACTACAACAATGGCAGTATCAATAGAAATGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCACAAATAATAACTACAACAATGGCAGTATCAATAGAAATGATAA  50

seq1  TATTAATGGAAAGGGAAACTATCAGAGTCTTGTCCCTAGACAAAGAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGGAAAGGGAAACTATCAGAGTCTTGTCCCTAGACAAAGAACTA  100

seq1  CAGCAACCAATGACTACTGAGAGAGACACAATGTGCCTCTATCAGAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCAATGACTACTGAGAGAGACACAATGTGCCTCTATCAGAGTTG  150

seq1  AGCACCTTTATTGATTTTCCACTGGAGAGTGGTCAGCCTTGAAACCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTTATTGATTTTCCACTGGAGAGTGGTCAGCCTTGAAACCATAT  200

seq1  ACACACAAACAAAACAAATGGATTCAGCACATTATATATTTTATACATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAACAAAACAAATGGATTCAGCACATTATATATTTTATACATGT  250

seq1  GCAGAGACATATATAGTAAGTATAATAAAATAAAAAGAGGCTTTCAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGACATATATAGTAAGTATAATAAAATAAAAAGAGGCTTTCAACCT  300

seq1  GAGAGGAGTGACTAGAGGGTGTACGTGATACAATTTTATTGCAAGGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGTGACTAGAGGGTGTACGTGATACAATTTTATTGCAAGGGAAA  350

seq1  ACATTAAAAGTAAAAAGTTAATAAAACAGAATATGTTGATCTGGAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAAGTAAAAAGTTAATAAAACAGAATATGTTGATCTGGAAATTT  400

seq1  TGGGACCTCTCAAAATTCTGATCTTTAAAATTTTACTTTGCACAATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCTCTCAAAATTCTGATCTTTAAAATTTTACTTTGCACAATGAAA  450

seq1  TTGAATGTTAAAAGACAAACTTAGCATTGGAAGTAAAATTTTAGAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGTTAAAAGACAAACTTAGCATTGGAAGTAAAATTTTAGAGACAT  500

seq1  ATTTCAAATCATGTAATGTTAATTATTTTACAAAAGTATAATGTACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATCATGTAATGTTAATTATTTTACAAAAGTATAATGTACAGAA  550

seq1  CTAGAAATAGTATTTATTTATTGAAAGAAATGTATATGAGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATAGTATTTATTTATTGAAAGAAATGTATATGAGAATTC  595

seq1: chr9_5944412_5944503
seq2: B6Ng01-035O04.g_499_590 (reverse)

seq1  GGCCCTGACATTGCCCTATACTGGGGCATAGAACCTTCCCAAGACCAAGG  50
      |||||||||||| |||||||||||||||||||| |||| || ||| ||||
seq2  GGCCCTGACATTTCCCTATACTGGGGCATAGAATCTTCACAGGACTAAGG  50

seq1  GCCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTA  92
      |||| ||||||||||||||||  ||||||| |||||||||||
seq2  GCCTTTCCTCCCATTGATGACTCACTAGGCAATCCTCTGCTA  92