BAC Information

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BAC

Clone NameB6Ng01-036P04
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036P04.bB6Ng01-036P04.g
ACCDH864968DH864969
length1,160602
definitionDH864968|Mus musculus domesticus DNA, BAC clone: B6Ng01-036P04, 5' end.DH864969|Mus musculus domesticus DNA, BAC clone: B6Ng01-036P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataatcacaggatcacagagatagctagatgatgaggagtttt
gacacaaccagggttacaagaaggacagtctctactcacacatagtgagg
gcagggagcactagagataatcagatgataggaggcaaatataagtatat
aagcaacagaaaccaaaaatacttggcattatcagaacccaattctccca
ccatagcaagtccaggatacaccatcacactggaaaatcaagatgcagat
ttaaaatcagttctcatgactataattgaggacttcaagaagtacataaa
taactcccttaaagaaatacaggaggacacaggtaaacatgtagaagccc
ttaaagaggaaacacaaaaatcccttaaagaattataggaaaacacaatc
aaataaaggaaggaaatgaacaaaatcatccaagatctacagatggaaaa
agaaacagtaaagaaatcacaaagggagataactctggagttagaaaacc
taggaaatagatcaggagtcatagatgcaagcatcaccaacagaatacaa
gagatagaaaagagaatctcaggggcagaagataccatagaaaacattga
cacaacagtcaaagaaaatgcaaagagcaaaaagatcctaacccaaaaca
tccaggaaatccaggacacaatgagaagatcaaacctaaaggataatagg
aagagaagagagtgaagattcccaaattaaaatgccagtaaatatcttca
acaaaattatagaagaaaacttccctagcctaaagaaagagatacccatg
aacatacagaagcctacagaactccagttagactggaccagaaaagaaat
ttctctgttacatatcatcaaacacaaatgcactaactaaacaagaagaa
tattaaagcagtaggggaaaaaaaacagtacatataagcagactatccga
tacacagatctcacgagactatgagctagagtcctgggcgatgtcatacg
acttagagacctatgtcacgatacttacaggaaactcattacctagtgaa
agattgctgaaaccaactacaatctcaattcagcgtaaggtaatgtaagc
acagaggatactgagcgagaagtctccgatcatatgagtaccacgaattc
gctttactag

gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcggggaaatgcaaatcaaaacaaccctgaga
ttccacctcataccaatcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccatttttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctt
agaaaattggacatagtactactggaggatccagcaatacctctcctgga
catatatccagaagatgttccaaccggtaagaaggacacatgctccacta
tgttcatagcagtcttatttataatagccagaagctggaaagaacccaga
tgtccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggggtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggccatgagtgaggtaacacaatcacaaaggaa
ctcacacaatatgtactcactgataagtggatattagccaaaacttagga
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-036P04.g_68_539 (reverse)

seq1  TTTAATAGCT----------CCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||||          ||||||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACCCCATTGTGTAAATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||||||||||||| |||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  ATAAATAAGACTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCGGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  ||||||||||||||||| |||| ||||||||||||||||||||| 
seq2  TGGAACATCTTCTGGATATATGTCCAGGAGAGGTATTGCTGGATCCTCCA  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||| | |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTAAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAAAAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTGGTATGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACA-TTTTTTCAGGTGCTTCTCTGCCATTC  439
      | ||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  CCGATGATTAAGGATGTTGAACATTTTTTTCAGGTGCTTCTCTGCCATTT  450

seq1  GGTATTCCTCAGGTGAGAATTC  461
      ||||||||||||||||||||||
seq2  GGTATTCCTCAGGTGAGAATTC  472


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