BAC Information

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BAC

Clone NameB6Ng01-040F20
Chromosome10 (Build37)
Map Location 109,321,146 - 109,322,138
singlet/doubletsinglet
Overlap geneNav3
Upstream geneSyt1
Downstream geneLOC100042497, LOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040F20.bB6Ng01-040F20.g
ACCDH867359DH867360
length1,045736
definitionDH867359|Mus musculus domesticus DNA, BAC clone: B6Ng01-040F20, 5' end.DH867360|Mus musculus domesticus DNA, BAC clone: B6Ng01-040F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atgttaaaaattgcttaccactgactaaattataatggagaggagcctgc
ggaattccatcagaagatatataaaaatgagagctgttctccgaagtaaa
tgaggcatactttttattctaagccacaggaaaaaaaagcattctttcaa
aagttgtatttgcatcttcacagttgagtgagcctgtggttaaatgcaaa
cactatgtttcctatcttaaaaggtcaatgtgcatggatgttaagtactc
agagtagtatgacagccagctcataaacatttaaagtgagcaaggaagga
agtctcaatctaccaggcaagagagtattctcaatgtcaagaaattaaag
ttagtcacctagaaaaatgtttaaagctcagaaataaagccaaggcaaac
acatttacattgagaaagaaatatattgataagaaagtattattgaaagt
actttgttgtaaaaatggagctgaaaattttgaccagagtgtgacctaac
agatttcattccaccagcagcatctgagtcttcagtgagggtattgtgtt
gaaatgtatgtcagattctatctcaggctgctttgctattagaaaaacaa
caacaaaaaagagggatgcatcccatttgcagtcacctaacccagacact
attgctgatgttagagtttgctgacaggagcctggtatggctgttcctga
gaggctctgccaacacctgaccaatatagatgcagatactcacagtcaat
catcggactgagcatgggcaccacaatggaagagctaggggaaggactga
aggagttgaaagggataggaaccccataggaagaacaatatcaactatcc
ggcccacccaaagctcccagggactaaactaccaaccaaagaatacacat
ggagggacccatggctccagatagatatgaagtagaggatggccttatct
ggcttcaatgggaagggaggacctcagtcctgcagagacttgatgcccca
gtgtaggggatgctagagtggttaggcaggagtggggggtgtggt

gaattctttcatcaattccacccccaattctacatttatttatgtagtca
agattattttgttattaaatacagatctccgttttaaacctcaccttgtt
tacttatataattgtatattcttccacagttttaaaaagaggctcattct
taccttaaaattttctactaaacagtggaattttgattgtttgttttatg
aatggttatatcaatagggaatgcattgtaaatactcaaagtagtgagtg
ttaacttggggttacaactccctcaaccacatattcctttccaggaatat
gatctgtaaagggaatagaaaattaggaatttatcttggattgtagagga
attttaatggagcaacatgtctactacagtaagggatcacatccaaagat
cttttatggttgcatgatctggctggaatgacacatctttaatcctattg
gctggaatacagacatgcccttggtgcatccatttaatcccatgtttgaa
agtgacatataattgagtggcagacacaatgacaaatcagggaaagatct
gacagaatgagtcagagatagcatatgtccaactctcaggagaacagaac
agaaaagagagactaattgtagcagaggatggtcttgtctgggcatcggt
gggaagagaggcccttggtcatgtgaaggctccatgccccagtgtagggg
aatgccagggcagggaggtgggagtaggtgggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109321146_109322138
seq2: B6Ng01-040F20.b_52_1045

seq1  GAATTCCATCAGAAGATATATAAAAATGAGAGCTGTTCTCCGAAGTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGAAGATATATAAAAATGAGAGCTGTTCTCCGAAGTAAAT  50

seq1  GAGGCATACTTTTTATTCTAAGCCACAGGAAAAAAAAGCATTCTTTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATACTTTTTATTCTAAGCCACAGGAAAAAAAAGCATTCTTTCAAA  100

seq1  AGTTGTATTTGCATCTTCACAGTTGAGTGAGCCTGTGGTTAAATGCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTATTTGCATCTTCACAGTTGAGTGAGCCTGTGGTTAAATGCAAAC  150

seq1  ACTATGTTTCCTATCTTAAAAGGTCAATGTGCATGGATGTTAAGTACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTTCCTATCTTAAAAGGTCAATGTGCATGGATGTTAAGTACTCA  200

seq1  GAGTAGTATGACAGCCAGCTCATAAACATTTAAAGTGAGCAAGGAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTATGACAGCCAGCTCATAAACATTTAAAGTGAGCAAGGAAGGAA  250

seq1  GTCTCAATCTACCAGGCAAGAGAGTATTCTCAATGTCAAGAAATTAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAATCTACCAGGCAAGAGAGTATTCTCAATGTCAAGAAATTAAAGT  300

seq1  TAGTCACCTAGAAAAATGTTTAAAGCTCAGAAATAAAGCCAAGGCAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACCTAGAAAAATGTTTAAAGCTCAGAAATAAAGCCAAGGCAAACA  350

seq1  CATTTACATTGAGAAAGAAATATATTGATAAGAAAGTATTATTGAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACATTGAGAAAGAAATATATTGATAAGAAAGTATTATTGAAAGTA  400

seq1  CTTTGTTGTAAAAATGGAGCTGAAAATTTTGACCAGAGTGTGACCTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGTAAAAATGGAGCTGAAAATTTTGACCAGAGTGTGACCTAACA  450

seq1  GATTTCATTCCACCAGCAGCATCTGAGTCTTCAGTGAGGGTATTGTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTCCACCAGCAGCATCTGAGTCTTCAGTGAGGGTATTGTGTTG  500

seq1  AAATGTATGTCAGATTCTATCTCAGGCTGCTTTGCTATTAGAAAAACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATGTCAGATTCTATCTCAGGCTGCTTTGCTATTAGAAAAACAAC  550

seq1  AACAAAAAAGAGGGATGCATCCCATTTGCAGTCACCTAACCCAGACACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAGAGGGATGCATCCCATTTGCAGTCACCTAACCCAGACACTA  600

seq1  TTGCTGATGTTAGAGTTTGCTGACAGGAGCCTGGTATGGCTGTTCCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATGTTAGAGTTTGCTGACAGGAGCCTGGTATGGCTGTTCCTGAG  650

seq1  AGGCTCTGCCAACACCTGACCAATATAGATGCAGATACTCACAGTCAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGCCAACACCTGACCAATATAGATGCAGATACTCACAGTCAATC  700

seq1  ATCGGACTGAGCATGGGCACCACAATGGAAGAGCTAGGGGAAGGACTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGACTGAGCATGGGCACCACAATGGAAGAGCTAGGGGAAGGACTGAA  750

seq1  GGAGTTGAAAGGGATAGGAACCCCATAGGAAGAACAATATCAACTATCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGAAAGGGATAGGAACCCCATAGGAAGAACAATATCAACTATCCG  800

seq1  GCCCACCCAAAGCTCCCAGGGACTAAACTACCAACCAAAGAATACACATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCCAAAGCTCCCAGGGACTAAACTACCAACCAAAGAATACACATG  850

seq1  GAGGGACCCATGGCTCCAGATAGATATGAAGTAGAGGATGGCCTTATCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACCCATGGCTCCAGATAGATATGAAGTAGAGGATGGCCTTATCTG  900

seq1  GCTTCAATGGGAGGGGAGGACCTCAGTCCTGCAGAGACTTGATGCCCCAG  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCTTCAATGGGAAGGGAGGACCTCAGTCCTGCAGAGACTTGATGCCCCAG  950

seq1  TGTAGGGGATGCTAGAGTGGTGAGGCAGGAGT-GGGGGTGTGGT  993
      ||||||||||||||||||||| |||||||||| |||||||||||
seq2  TGTAGGGGATGCTAGAGTGGTTAGGCAGGAGTGGGGGGTGTGGT  994


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