BAC Information

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BAC

Clone NameB6Ng01-040O19
Chromosome10 (Build37)3 (Build37)
Map Location 104,054,586 - 104,055,106118,159,780 - 118,160,864
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040O19.bB6Ng01-040O19.g
ACCDH867745DH867746
length1,0281,082
definitionDH867745|Mus musculus domesticus DNA, BAC clone: B6Ng01-040O19, 5' end.DH867746|Mus musculus domesticus DNA, BAC clone: B6Ng01-040O19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,586 - 104,055,106)(118,159,780 - 118,160,864)
sequence
gaattccaactcaattcttcaacgaattagaaagagcaatttacaaattc
atctggaataacaaaaaacctaggatagcaaaaactcttctcaaggataa
aagtacctctggtggaatcaccatgcctgacctaaagctgtactacagag
caattgtgataaaaactgcatggtactggtatagtgacagacaagtagat
caatggaatagaattgaagacccagaaatgaacccaaacacctatggcca
cttgatctttgacaagggagctaaaaccatccagtggaaaaaagacagca
ttttcaacaaatggtgctggcacaactggtggttatcatgtagaagaatg
tgaaatgatccatttctatctccttgtactaaggtcaaatctaatggatc
aaggaacttcacataaaaccagagacactgaaacttatagaggagaaagt
gggaaaaagcctcgaagatatgggcacaagagaaaaattcctgaatagaa
aagcaatggcttgtgctgtaagatcaagaatcaacaaatgggacctcata
aaactgcaaagcttctgtaaggcaaaagacaccatcaataacacaaaaag
gtcaccaacagattttgaaaggatctttacctatcctaaatcagataggg
gactaatatccaatatatatatatatatgtaaacaactcaagaaggtgga
ctccagaaaaacaaataaccccattaaaaaatggggctcagagctaaaca
aagaattctcatctgaggaatacagaatggctgagaagcacctgaaaaaa
gtttagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttcatctcacaccagtcagaatggctaagataaaaattcatgtgacatca
gatgctggcgaggatgtggagaagaggaacactcctccattgttcgtggg
attgcaagctttataaccactctggaaatcagtctggtggttcctcagaa
aatgggatatagtactactggaggatcc
gaattctactcccatgtttcaatccattaagaacatttggaccaaagaaa
aattagaagagctatttaaaactggacaaagacttgcattagctataaaa
aaagctatataaaaccaattttaattgatttttccctattagttttcatt
actgctggggaactgttgagacatgtgtcattgttaccatgaaattatgt
cagtctcacattcataagcaacaaaggtacacatgattttggaaatatga
tttgtttgggccatataaatatttcaaaactatataaagtcccttttgac
tcccatgtgtactaagacaaaatagtaggagactttagcacatggagcct
tagtgtgagggcatgtgatcctctaacaagatgatttcacctgaaaatac
tttcagatgttttgggggaacaactcctaatactttctatcttctccaaa
gagtgtatatttgtggaattcaatgcagtcattgcgataagaagacatca
gaatcaggactctgagaacagaatatcaagcgtacatttgatgttctaaa
agagacctgatctccttaaagcgtaggacccacgcagggtgtctactgag
agatcattgctatctaagagatggcactttcttagcaatataataacctt
tgaagaacattctaagtattaaaaaatttatctgtcttcacactgtaaag
ccattgcttggaagttacttctttacttttacaacttaccctatttaaaa
aaaatgctttcatatgcttcatatcgtttcagaaaatttttaatcaaaaa
agaacaggatctttgaacacaaggctaacgactgaatagccattattttg
ctctttaaagaaagaaaaccaaaggaggaagcagcaaatgtagcttaaaa
tatttttgatacccaccagcttctcttcatctggctgctagttaagcttc
agtttttgttatctttgaaagtgttgaatagacttctccattcaccttcc
ccctactgccctattccacttctgcctgtctttcttgagcattactttat
aagattttacaatttgcaatcatgtttctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054586_104055106
seq2: B6Ng01-040O19.b_45_563 (reverse)

seq1  TACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCA  50
      ||||||||||||||||||| ||||||||||||||||||| | ||| ||||
seq2  TACAGCACAAGCCATTGCTTTTCTATTCAGGAATTTTTCTCTTGTGCCCA  50

seq1  TATCTTCGAGGCTTTTCCCTACTTTTTCCTCTATAAGTTTCAGTGTCTCT  100
      |||||||||||||||| || ||||| ||||||||||||||||||||||||
seq2  TATCTTCGAGGCTTTTTCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCT  100

seq1  GGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTTACCTTAGTACAAGG  150
      ||||||||||| |||||||| ||||| |||||||| ||||||||||||||
seq2  GGTTTTATGTGAAGTTCCTTGATCCA-TTAGATTTGACCTTAGTACAAGG  149

seq1  AGATAGTAATTGATCAATTCACAATCTTCTACATGATAACAGCCAGTTGT  200
      |||||| ||| ||||| |||||| ||||||||||||||||  ||||||||
seq2  AGATAGAAATGGATCATTTCACATTCTTCTACATGATAACCACCAGTTGT  199

seq1  GCCAGCATGATTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATAGTTTT  250
      |||||||  ||||||||||||||||||| ||||||||||||||| |||||
seq2  GCCAGCACCATTTGTTGAAAATGCTGTC-TTTTTTCCACTGGATGGTTTT  248

seq1  AGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATCTCTG  300
      |||||||||||||||||||||||| |||||||||| ||||||||| ||||
seq2  AGCTCCCTTGTCAAAGATCAAGTGGCCATAGGTGTTTGGGTTCATTTCTG  298

seq1  GATCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCGCTATACAAGTAC  350
      | ||||||||||| |||||||| |||||||||||||| |||||| |||||
seq2  GGTCTTCAATTCTATTCCATTGATCTACTTGTCTGTCACTATACCAGTAC  348

seq1  CATGCAGTTTTTATCACAATTGCTCTGTAGTACAGTTTTAGGTCCGGGAT  400
      ||||||||||||||||||||||||||||||||||| |||||||| || ||
seq2  CATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTCAGGCAT  398

seq1  GGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTTGCTATCC  450
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGTGATTCCACCAGAGGTACTTTTATCCTTGAGAAGAGTTTTTGCTATCC  448

seq1  TAGGTTTTTTGTTATTCCAGATGAATCTGCCGATTGCCCTTTATAATTCT  500
      |||||||||||||||||||||||||| ||   ||||| |||| |||||| 
seq2  TAGGTTTTTTGTTATTCCAGATGAATTTGTAAATTGCTCTTTCTAATTCG  498

seq1  TTGAAGAATTGAGTTGGAATT  521
      |||||||||||||||||||||
seq2  TTGAAGAATTGAGTTGGAATT  519

seq1: chr3_118159780_118160864
seq2: B6Ng01-040O19.g_68_1149 (reverse)

seq1  AACAGAAAACATGATTGCAAATTGTAAAATCTTTAATAAAGTAATGCTTC  50
      ||||| |||||||||||||||||||||||||||  |||||||||||||  
seq2  AACAG-AAACATGATTGCAAATTGTAAAATCTT--ATAAAGTAATGCTCA  47

seq1  AGAGAGACAGGCAGAAGTGGATAAGGGCAGTAGGGGGAAGGTGAAATGGA  100
      ||| |||||||||||||||||  |||||||||||||||||||| ||||||
seq2  AGAAAGACAGGCAGAAGTGGAATAGGGCAGTAGGGGGAAGGTG-AATGGA  96

seq1  GAAGTCTATTCAACACTTTCAAAGATAACAAAAACTGAAGCTTAACTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTATTCAACACTTTCAAAGATAACAAAAACTGAAGCTTAACTAGC  146

seq1  AGCCAGATGAAGAGAAGCTGGTGGGTATCAAAAATATTTTAAGCTACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGATGAAGAGAAGCTGGTGGGTATCAAAAATATTTTAAGCTACATT  196

seq1  TGCTGCTTCCTCCTTTGGTTTTCTTTCTTTAAAGAGCAAAATAATGGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTCCTCCTTTGGTTTTCTTTCTTTAAAGAGCAAAATAATGGCTA  246

seq1  TTCAGTCGTTAGCCTTGTGTTCAAAGATCCTGTTCTTTTTTGATTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCGTTAGCCTTGTGTTCAAAGATCCTGTTCTTTTTTGATTAAAAA  296

seq1  TTTTCTGAAACGATATGAAGCATATG-AAGCATTTTTTTTAAATAGGGTA  349
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTTCTGAAACGATATGAAGCATATGAAAGCATTTTTTTTAAATAGGGTA  346

seq1  AGTTGTAAAAGTAAAGAAGTAACTTCCAAGCAATGGCTTTACAGTGTGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAAAGTAAAGAAGTAACTTCCAAGCAATGGCTTTACAGTGTGAA  396

seq1  GACAGATAAATTTTTTAATACTTAGAATGTTCTTCAAAGGTTATTATATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATAAATTTTTTAATACTTAGAATGTTCTTCAAAGGTTATTATATT  446

seq1  GCTAAGAAAGTGCCATCTCTTAGATAGCAATGATCTCTCAGTAGACACCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAAAGTGCCATCTCTTAGATAGCAATGATCTCTCAGTAGACACCC  496

seq1  TGCGTGGGTCCTACGCTTTAAGGAGATCAGGTCTCTTTTAGAACATCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGGGTCCTACGCTTTAAGGAGATCAGGTCTCTTTTAGAACATCAAA  546

seq1  TGTACGCTTGATATTCTGTTCTCAGAGTCCTGATTCTGATGTCTTCTTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACGCTTGATATTCTGTTCTCAGAGTCCTGATTCTGATGTCTTCTTAT  596

seq1  CGCAATGACTGCATTGAATTCCACAAATATACACTCTTTGGAGAAGATAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAATGACTGCATTGAATTCCACAAATATACACTCTTTGGAGAAGATAG  646

seq1  AAAGTATTAGGAGTTGTTCCCCCAAAACATCTGAAAGTATTTTCAGGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTAGGAGTTGTTCCCCCAAAACATCTGAAAGTATTTTCAGGTGA  696

seq1  AATCATCTTGTTAGAGGATCACATGCCCTCACACTAAGGCTCCATGTGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTTGTTAGAGGATCACATGCCCTCACACTAAGGCTCCATGTGCT  746

seq1  AAAGTCTCCTACTATTTTGTCTTAGTACACATGGGAGTCAAAAGGGACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTCCTACTATTTTGTCTTAGTACACATGGGAGTCAAAAGGGACTT  796

seq1  TATATAGTTTTGAAATATTTATATGGCCCAAACAAATCATATTTCCAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTTTTGAAATATTTATATGGCCCAAACAAATCATATTTCCAAAA  846

seq1  TCATGTGTACCTTTGTTGCTTATGAATGTGAGACTGACATAATTTCATGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTACCTTTGTTGCTTATGAATGTGAGACTGACATAATTTCATGG  896

seq1  TAACAATGACACATGTCTCAACAGTTCCCCAGCAGTAATGAAAACTAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATGACACATGTCTCAACAGTTCCCCAGCAGTAATGAAAACTAATA  946

seq1  GGGAAAAATCAATTAAAATTGGTTTTATATAGCTTTTTTTATAGCTAATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAATCAATTAAAATTGGTTTTATATAGCTTTTTTTATAGCTAATG  996

seq1  CAAGTCTTTGTCCAGTTTTAAATAGCTCTTCTAATTTTTCTTTGGTCCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTTGTCCAGTTTTAAATAGCTCTTCTAATTTTTCTTTGGTCCAA  1046

seq1  ATGTTCTTAATGGATTGAAACATGGGAGTAGAATTC  1085
      ||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTAATGGATTGAAACATGGGAGTAGAATTC  1082