BAC Information

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BAC

Clone NameB6Ng01-041I15
Chromosome10 (Build37)
Map Location 5,440,719 - 5,441,286
singlet/doubletsinglet
Overlap geneEsr1
Upstream geneRgs17, Mtrf1l, Fbxo5, LOC666395, Vip, Myct1, Syne1
Downstream geneLOC100041310, Gm221, 1700052N19Rik, Rmnd1, Zbtb2, Akap12, Mthfd1l, Plekhg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041I15.bB6Ng01-041I15.g
ACCDH868176DH868177
length595699
definitionDH868176|Mus musculus domesticus DNA, BAC clone: B6Ng01-041I15, 5' end.DH868177|Mus musculus domesticus DNA, BAC clone: B6Ng01-041I15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacattaatggaaatggtgagaagaaaccattaccaaagcaagt
cctatagaggagaacatttaattgagcttacctttgaattttagaagttt
aatgcactattatcatggcaggaagcaaggaattttgcaggcagccatag
tgctggatgttccacatgttgagctgtgggctacagagcagacaatgtgt
cacactaagctgtagcttgagcataggagagttccacatgttgggctgtg
agcaagagaaggagacaatgtgtcacactagctgttccacatgttgagct
gtgggcaacagaaggggaaaatgtgtcacactagctgtagcttgagcata
ggagacttcaaagtctgcccacacaataacagacttccctcaaaaagtct
acacctactccaacaaggcccttttcagccaaacacatgagtctaaaggg
gccatacgtattcataccagcacaacaagaaaagaaaagaaaagaaaaga
aaagaagaggagaggagaggagaggagaggagaggagaggagagg
gaattcactcttgtacttgcacataaggcttgtttactagttaggcacag
tggaagccagcgccatctcataatggcgattgctcactgcatgcatacca
ttgctcacggcatggctctccacacccccttgtcttttttgatgactttg
ggttggaatttgattttattagatatttgaatggctattccagcttgttt
cttcagaccatttgcttggaaaattgttttccagcctttcattctgaggt
agtgtctatctttttctctgagatgagtttcctgtaagcagcaaaatgtt
gggtcctgtttgtgtagccagtttgttagtctatgtctttttattgggta
gttgaatccattgatattaagagatattaaggaaaagtaattgttgcttc
ctattatttttgttgttaaggttggcattctgtacttgtggctgtcttct
tttaggtttgttggtggattaccttcttgctttttctaggatgtgctttc
tgtccttgtattttttttttctgttattatcctttgaagggctggattcg
tggaaagataatgtgtgaatttggttttgtagtggaaaacttttgtttct
ccatctaaggtaattgaaagtttggctgggtatagtagccttgcttggca
tatgtgttctcttagtgtctgtaaaacatctgtccagtctcttctggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_5440719_5441286
seq2: B6Ng01-041I15.g_201_767 (reverse)

seq1  AGCCAGAAGAGCCTGGACAGATGTTATAAAGACACTAAGAGAACAGAAAT  50
      ||||||||||| ||||||||||||| || |||||||||||||||| | ||
seq2  AGCCAGAAGAGACTGGACAGATGTTTTACAGACACTAAGAGAACACATAT  50

seq1  TCCAGCCAAGGCTACTATACCCAGCCAAACTCTCAATTACCATAGATGGA  100
       |||  ||||||||||||||||||||||||| ||||||||| ||||||||
seq2  GCCAAGCAAGGCTACTATACCCAGCCAAACTTTCAATTACCTTAGATGGA  100

seq1  GAAACCAAAGTATTCCACGACAAAACCAAATTCACACATTACCTTTCCAC  150
      ||||| ||||| |||||| |||||||||||||||||||||| ||||||||
seq2  GAAACAAAAGTTTTCCACTACAAAACCAAATTCACACATTATCTTTCCAC  150

seq1  AAATCCAGCCCTTCAAAGGATAATAACAGAAAAAAACCAATACAAGGACG  200
       |||||||||||||||||||||||||||||||||||  ||||||||||| 
seq2  GAATCCAGCCCTTCAAAGGATAATAACAGAAAAAAA-AAATACAAGGACA  199

seq1  GGAAACTCACCCTAGAAAAAACAAGAAGGTAATCCCTCAACAAACCTAAA  250
      | || | || |||||||||| ||||||||||||||  |||||||||||||
seq2  GAAAGCACATCCTAGAAAAAGCAAGAAGGTAATCCACCAACAAACCTAAA  249

seq1  AGAAGACAGCCACAAAAACAGAATGCCAACTTTAACAACAAAAATAAAAG  300
      |||||||||||||||  ||||||||||||| |||||||||||||||| ||
seq2  AGAAGACAGCCACAAGTACAGAATGCCAACCTTAACAACAAAAATAATAG  299

seq1  GAACCAACAATTACTTTTCCTTAATATCTCTTAATATCAATGGTCTCAAC  350
      ||| |||||||||||||||||||||||||||||||||||||||  |||||
seq2  GAAGCAACAATTACTTTTCCTTAATATCTCTTAATATCAATGGATTCAAC  349

seq1  TCCCCAATAAAAAGACATAGACTAACAAACTGGCTACACAAACAAGACCC  400
      | |||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TACCCAATAAAAAGACATAGACTAACAAACTGGCTACACAAACAGGACCC  399

seq1  AACATTTTGCTGCTTACAGGAAACTCATCTCAGAGAAAAGGATAGACACT  450
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AACATTTTGCTGCTTACAGGAAACTCATCTCAGAGAAAAAGATAGACACT  449

seq1  ACCTCAGAATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTATGAAG  500
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACCTCAGAATGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTCTGAAG  499

seq1  AAACAAGCTGGAGTAGCCATCCTAATATCTGATAAGATTGACTTCCAACC  550
      |||||||||||| ||||||| | ||||||| |||| ||  | ||||||||
seq2  AAACAAGCTGGAATAGCCATTCAAATATCTAATAAAATCAAATTCCAACC  549

seq1  CAAAATCATCAAAAAAGA  568
      |||| |||||||||||||
seq2  CAAAGTCATCAAAAAAGA  567