BAC Information

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BAC

Clone NameB6Ng01-041I17
Chromosome10 (Build37)
Map Location 36,987,167 - 37,055,391
singlet/doubletdoublet
Overlap genenone
Upstream geneHs3st5, Hdac2, Marcks, LOC100040846
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041I17.bB6Ng01-041I17.g
ACCDH868178DH868179
length682738
definitionDH868178|Mus musculus domesticus DNA, BAC clone: B6Ng01-041I17, 5' end.DH868179|Mus musculus domesticus DNA, BAC clone: B6Ng01-041I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,987,167 - 36,987,847)(37,054,825 - 37,055,391)
sequence
gaattctctagtgcttctttaaacaaacaaacgaacgaacaaacaaacaa
tcaggagatgccttttaattaccaaggggttgtccacagttgctaagcta
caactgtaaaatttgatggctcttttgttcttcttagacacagagtctta
ggttgcccagactggcctttaacttgcttcatagctgaggatgacgggaa
ctcctgactgtcacttcaccctccataagggcttggattataggagtgtg
ctacaaaaaccagtttgatggctttattatcatttcattaatgttttcct
attcatcagaatcttgtatctgcaccatcatcaatggatgaaaataattc
aacatgtaattataattaaaagggaagaagaaaatgcaaaactatctggc
atatacacgttcagcttttacgagggtatatcaaaatctgtttaaaagtt
agggcctaacacactactttccctcctcaatattatgttactcttattta
agacatccttttcctttctcccctgcccccctttaaagacagggcctcct
atatcctaggctagccttgaacttacttatgtgcctaaggctggtcttga
agttctaattctcttgcttccatccctttatgctgagattataggtgtgc
catcatgccttggatggggatgggattgggtg
gaattcatgggtgcagtggtcatgtcatatgaaaaagacagaatttcaca
gcactctgcctcacgccctaggtgttattctcttggaacaagtcctgagt
gcggggatggagtgttgacacagatatctcacttagggctgggcattcag
tcacttatccacagtacttagaccagttatgtcttgactgcttctctcac
caagactgagacagccctgatccatgggttcaggcacaaatattcaaaag
gcagtttgacaacctgaccacttagcaaaataaagagagtataaattccc
caccctcctaggacctataacctctccagctgtggttttgtgggaacagc
tgaaggcatctcctcggtgacatcatcctccttccagtatatctaatctt
tcgagaattatttctacagaacaccaaggtcatgtgaaagtagaggatgt
ttcactctggtgaccacgccctggttgatgattgtgcagggctctctaca
gtgatggggctgaaggcagatgatctctcacttgccatggagaaaacaat
gaagtgtttctcatgcccagtaaaggaaatatagctctgtgtccaagatg
ttgataggaaatagaaaatctcagccccacacttactcttcacctagctg
tcctgtccctgtgcctaaaatcctcatgctctatactcattttccactta
aaagtgtgtttgttttataagacatctcagcaggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36987167_36987847
seq2: B6Ng01-041I17.b_40_721

seq1  GAATTCTCTAGTGCTTCTTTAAACAAACAAACGAACGAACAAACAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGTGCTTCTTTAAACAAACAAACGAACGAACAAACAAACAA  50

seq1  TCAGGAGATGCCTTTTAATTACCAAGGGGTTGTCCACAGTTGCTAAGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGATGCCTTTTAATTACCAAGGGGTTGTCCACAGTTGCTAAGCTA  100

seq1  CAACTGTAAAATTTGATGGCTCTTTTGTTCTTCTTAGACACAGAGTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTAAAATTTGATGGCTCTTTTGTTCTTCTTAGACACAGAGTCTTA  150

seq1  GGTTGCCCAGACTGGCCTTTAACTTGCTTCATAGCTGAGGATGACGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCCAGACTGGCCTTTAACTTGCTTCATAGCTGAGGATGACGGGAA  200

seq1  CTCCTGACTGTCACTTCACCCTCCATAAGGGCTTGGATTATAGGAGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGACTGTCACTTCACCCTCCATAAGGGCTTGGATTATAGGAGTGTG  250

seq1  CTACAAAAACCAGTTTGATGGCTTTATTATCATTTCATTAATGTTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAAACCAGTTTGATGGCTTTATTATCATTTCATTAATGTTTTCCT  300

seq1  ATTCATCAGAATCTTGTATCTGCACCATCATCAATGGATGAAAATAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAGAATCTTGTATCTGCACCATCATCAATGGATGAAAATAATTC  350

seq1  AACATGTAATTATAATTAAAAGGGAAGAAGAAAATGCAAAACTATCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTAATTATAATTAAAAGGGAAGAAGAAAATGCAAAACTATCTGGC  400

seq1  ATATACACGTTCAGCTTTTACGAGGGTATATCAAAATCTGTTTAAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACGTTCAGCTTTTACGAGGGTATATCAAAATCTGTTTAAAAGTT  450

seq1  AGGGCCTAACACACTACTTTCCCTCCTCAATATTATGTTACTCTTATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTAACACACTACTTTCCCTCCTCAATATTATGTTACTCTTATTTA  500

seq1  AGACATCCTTTTCCTTTCTCCCCTGCCCCCCTTTAAAGACAGGGCCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCCTTTTCCTTTCTCCCCTGCCCCCCTTTAAAGACAGGGCCTCCT  550

seq1  ATATCCTAGGCTAGCCTTGAACTTACTTATGTGCCTAAGGCTGGTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTAGGCTAGCCTTGAACTTACTTATGTGCCTAAGGCTGGTCTTGA  600

seq1  AGTTCTAATTCTCTTGCTTCCATCCC-TTATGCTGAGATTATAGGTGTGC  649
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTTCTAATTCTCTTGCTTCCATCCCTTTATGCTGAGATTATAGGTGTGC  650

seq1  CATCATGCCTTGGATGGGGATGGGATGGGGTG  681
      |||||||||||||||||||||||||| |||||
seq2  CATCATGCCTTGGATGGGGATGGGATTGGGTG  682

seq1: chr10_37054825_37055391
seq2: B6Ng01-041I17.g_242_807 (reverse)

seq1  TTTCCCTGCTGAGATGTCTTTATAAAACAAACACACTTTTAAGTGGAAAA  50
      || ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCCCCTGCTGAGATGTC-TTATAAAACAAACACACTTTTAAGTGGAAAA  49

seq1  TGAGTATAGAGCATGAGGATTTTAGGCACAGGGACAGGACAGCTAGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATAGAGCATGAGGATTTTAGGCACAGGGACAGGACAGCTAGGTGA  99

seq1  AGAGTAAGTGTGGGGCTGAGATTTTCTATTTCCTATCAACATCTTGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAGTGTGGGGCTGAGATTTTCTATTTCCTATCAACATCTTGGACA  149

seq1  CAGAGCTATATTTCCTTTACTGGGCATGAGAAACACTTCATTGTTTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTATATTTCCTTTACTGGGCATGAGAAACACTTCATTGTTTTCTC  199

seq1  CATGGCAAGTGAGAGATCATCTGCCTTCAGCCCCATCACTGTAGAGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAAGTGAGAGATCATCTGCCTTCAGCCCCATCACTGTAGAGAGCC  249

seq1  CTGCACAATCATCAACCAGGGCGTGGTCACCAGAGTGAAACATCCTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAATCATCAACCAGGGCGTGGTCACCAGAGTGAAACATCCTCTAC  299

seq1  TTTCACATGACCTTGGTGTTCTGTAGAAATAATTCTCGAAAGATTAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACATGACCTTGGTGTTCTGTAGAAATAATTCTCGAAAGATTAGATA  349

seq1  TACTGGAAGGAGGATGATGTCACCGAGGAGATGCCTTCAGCTGTTCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGAAGGAGGATGATGTCACCGAGGAGATGCCTTCAGCTGTTCCCAC  399

seq1  AAAACCACAGCTGGAGAGGTTATAGGTCCTAGGAGGGTGGGGAATTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACAGCTGGAGAGGTTATAGGTCCTAGGAGGGTGGGGAATTTATA  449

seq1  CTCTCTTTATTTTGCTAAGTGGTCAGGTTGTCAAACTGCCTTTTGAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTATTTTGCTAAGTGGTCAGGTTGTCAAACTGCCTTTTGAATAT  499

seq1  TTGTGCCTGAACCCATGGATCAGGGCTGTCTCAGTCTTGGTGAGAGAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTGAACCCATGGATCAGGGCTGTCTCAGTCTTGGTGAGAGAAGC  549

seq1  AGTCAAGACATAACTGG  567
      |||||||||||||||||
seq2  AGTCAAGACATAACTGG  566