BAC Information

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BAC

Clone NameB6Ng01-041N07
Chromosome10 (Build37)X (Build37)
Map Location 51,501,657 - 51,502,440140,177,465 - 140,177,506
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAscc3, Sim1, LOC268300, LOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik
Downstream geneVgll2, Ros1, Dcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041N07.bB6Ng01-041N07.g
ACCDH868377DH868378
length790117
definitionDH868377|Mus musculus domesticus DNA, BAC clone: B6Ng01-041N07, 5' end.DH868378|Mus musculus domesticus DNA, BAC clone: B6Ng01-041N07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,501,657 - 51,502,440)(140,177,465 - 140,177,506)
sequence
gaattctgatgatgtctaatagccttgcctttaagttgcttaggttcttg
ttcttgcctctccccatctaattatctctgatgttagtttgccttcctgt
ctctgactggagcttgtccctcctttgggcctgtgagcctgtgatcttag
gtgtgtcagcactcctggggagaccagctctcttccagaggtggggaggg
atttgggagcagaaggctgtgggacaaccttacctcaggagcgcagatgg
agaccaaaaggatcctgactatagttgtatcttaattcagacatgatatt
tattgagcaatgagtacttgaagcgttattgagtattcaatagtaacaat
ttgttttatttgtaggtgcattaacattgtactctctctttttaaatttg
tctttcaggtttcatggaccaaaatcttgctttgcagcccaggatagccc
tccaatttgtgatctttctgtctcagtctcctaagtgccagaattatgga
tatgtgccactttgcctggattcatcttgtttccatgtatcgatgcagcc
tttaaaaattaataataaactctagaatatttaccatgaaataaaacatg
agacatactttaaaataaagcaactgtggagagtgcgatagacacaacac
tttgggtaaactttgtgtaactaattttttatttggttttgtggccgtct
ttgttatgtattataggctagttttgaacatgctatgtagtatagggttg
gtctgagaactttgctatcatctggtatctacctagtgtt
ttggtttcttggaccttccatatataggcagccattgttggattaggtgg
accacagcctgcaagtcattcaaataaaattatatatatgtatgtgtgtg
tgtgtgtgtgtgtaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_51501657_51502440
seq2: B6Ng01-041N07.b_45_834 (reverse)

seq1  AACACTAGGTAGATACCAGATGATAGC-AAGTTCTCAGACCAA-CCTATA  48
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  AACACTAGGTAGATACCAGATGATAGCAAAGTTCTCAGACCAACCCTATA  50

seq1  CTACATAGCATGTTCAAAACTAGCCTATAATACATAAC-AAGACGGCCAC  97
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTACATAGCATGTTCAAAACTAGCCTATAATACATAACAAAGACGGCCAC  100

seq1  -AAACCAAAT-AAAAATTAGTTACACAAAGTTTACCCAAAGTGTTGTGTC  145
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAATAAAAAATTAGTTACACAAAGTTTACCCAAAGTGTTGTGTC  150

seq1  TATCGCACTCTCCACAGTTGCTTTATTTTAAAGTATGTCTCATGTTTTAT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGCACTCTCCACAGTTGCTTTATTTTAAAGTATGTCTCATGTTTTAT  200

seq1  TTCATGGTAAATATTCTAGAGTTTATTATTAATTTTTAAAGGCTGCATCG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGTAAATATTCTAGAGTTTATTATTAATTTTTAAAGGCTGCATCG  250

seq1  ATACATGGAAACAAGATGAATCCAGGCAAAGTGGCACATATCCATAATTC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGGAAACAAGATGAATCCAGGCAAAGTGGCACATATCCATAATTC  300

seq1  TGGCACTTAGGAGACTGAGACAGAAAGATCACAAATTGGAGGGCTATCCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTTAGGAGACTGAGACAGAAAGATCACAAATTGGAGGGCTATCCT  350

seq1  GGGCTGCAAAGCAAGATTTTGGTCCATGAAACCTGAAAGACAAATTTAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCAAAGCAAGATTTTGGTCCATGAAACCTGAAAGACAAATTTAAA  400

seq1  AAGAGAGAGTACAATGTTAATGCACCTACAAATAAAACAAATTGTTACTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGTACAATGTTAATGCACCTACAAATAAAACAAATTGTTACTA  450

seq1  TTGAATACTCAATAACGCTTCAAGTACTCATTGCTCAATAAATATCATGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATACTCAATAACGCTTCAAGTACTCATTGCTCAATAAATATCATGT  500

seq1  CTGAATTAAGATACAACTATAGTCAGGATCCTTTTGGTCTCCATCTGCGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTAAGATACAACTATAGTCAGGATCCTTTTGGTCTCCATCTGCGC  550

seq1  TCCTGAGGTAAGGTTGTCCCACAGCCTTCTGCTCCCAAATCCCTCCCCAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGGTAAGGTTGTCCCACAGCCTTCTGCTCCCAAATCCCTCCCCAC  600

seq1  CTCTGGAAGAGAGCTGGTCTCCCCAGGAGTGCTGACACACCTAAGATCAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAGAGAGCTGGTCTCCCCAGGAGTGCTGACACACCTAAGATCAC  650

seq1  AGGCTCACAGGCCCAAAGGAGGGACAAGCTCCAGTCAGAGACAGGAAGGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCACAGGCCCAAAGGAGGGACAAGCTCCAGTCAGAGACAGGAAGGC  700

seq1  AAACTAACATCAGAGATAATTAGATGGGGAGAGGCAAGAACAAGAACCTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACATCAGAGATAATTAGATGGGGAGAGGCAAGAACAAGAACCTA  750

seq1  AGCAACTTAAA-CCAAGGCTATTAGACATCATCAGAATTC  784
      |||||||||||  |||||||||||||||||||||||||||
seq2  AGCAACTTAAAGGCAAGGCTATTAGACATCATCAGAATTC  790

seq1: chrX_140177465_140177506
seq2: B6Ng01-041N07.g_150_191 (reverse)

seq1  ATTTACACACACACACACACACGTATACATATATATAATTTT  42
      ||||||||||||||||||||||  ||||||||||||||||||
seq2  ATTTACACACACACACACACACACATACATATATATAATTTT  42