BAC Information

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BAC

Clone NameB6Ng01-043C08
Chromosome10 (Build37)
Map Location 38,718,645 - 38,804,689
singlet/doubletdoublet
Overlap geneLama4
Upstream geneLOC100040915
Downstream gene1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn, LOC629337, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043C08.bB6Ng01-043C08.g
ACCDH869300DH869301
length9831,094
definitionDH869300|Mus musculus domesticus DNA, BAC clone: B6Ng01-043C08, 5' end.DH869301|Mus musculus domesticus DNA, BAC clone: B6Ng01-043C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,804,156 - 38,804,689)(38,718,645 - 38,719,744)
sequence
gaattctattgtaaatctaaaggtaaagaagaatgtaaagtctctctaat
ttataaattaagtcacgagtgtttttgttcttatgctcagaggttattat
gctgtcattggttgcttctggcaggctgtggatgtatgtgattttcttca
taaatcaatattctaaaatgtttaagacaaaaatatacaggaataggaag
atgatctagtacattgaaatattcctctctaaatggtaaaacagagaatt
tgtgaaacatagtgctagtcttcttttttttttaattgggtattttcttc
atttacatttcaaatgctatcccaaaagttccccataccctcccaccccc
actcccctacccacccactccctcttcttggccctggcgttcccctgtac
tgaggcatataaagtttgcaagaccaaggggcctctcttcccagtgatgg
cccactaggccatcttctgctacatgtgcactagtcttctttataaagac
attaggtaatagatctagtagtcccaacagcatctacattttgaatctag
tagaaatgagcaaaaatgacattgtcaagtgtctgtgccaactgtaatgt
ggaaaatatttgtgatttcattcagcaacaaaattagaggtactactgtg
gttcatttcaatattaaaaataggagacaatgttctttcaattagagaaa
atgaagatataatttgccacaggtgagtctacagacttcttgaattctgc
ccatcaactcctgaggggcaggactgaatttcaggtcaagatatatctgt
gactgtaatagtggcatgaatgttacagaggtaatcaactgcttgaggtt
aaaggcctgctccatagaaggaaacacgtgcctagtactgtcaatctggc
caacaacctgtggtctgggagctcacaggcctcagggaggaacctactac
tatcattgctctagacagacatagtgtctaact
gaattccaggtcaggcaggagtgcattgtctcaaaacaacaacaacaata
tcagcacacacaagttctacaagtgattcagtagagagaagttggtcaaa
atgaccatgtgactgtaaaaactgcttaaaaggaacatttgaccactcaa
ttatttcacatattaataacctaaatatttttaaatgctaggtttatttt
ttaaagactattctttggagtgcaaaggagaagttttacatattttattc
atttcagcctataataacctaaatatttttaaatgctaggtttatttttt
aaagactattctttggagtgcaaaggagaagttttacatattttattcat
ttcagcctatcttgtaagaaaaatttgcaaacaaaattgttcagaaagga
aggcttacttgaatacattaatgatataatagtcattcaaacttactaaa
aaaatacaacaaagattataaatcccaagtctctcatttcttatctgcat
ttcttcatttagctgatttacaaagccctgaagaccacaaagcccctagc
tgtaaaatgaagataacggagcttgctgtataggtttactgtgggctaaa
atgagaaaagtgtaggacatgacctacacttgaactttgtggacattcat
gttcaattagttaaacattcaatttagttagttattggggtcggcatgtt
ctactgaagaaagactaagatttgcatcggcctgaacgtcttacaacatg
gaatgtcattgataagagctgcatttaacaagagtactcagtgctgcaat
catgattattcatggtttacaggtcatgggtccagagatgtaaacccttt
gcatgatatctctctctctctctctgtctctgtctctctctttccttctc
cttcttccccctctctccctctctctctccttccctccctctcttcttcc
ctccctccatcccctctctccctcttctctctctctttctcctttagata
gggtctcatgtagttcagctgacctcagactcaatgtgcactcattgatc
acctgaccttcggcttctcctgcttctaccttcagctggatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38804156_38804689
seq2: B6Ng01-043C08.b_43_576 (reverse)

seq1  GATGCTGTTGGGACTACTAGATCTATTACCTAATGTCTTTATAAAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGTTGGGACTACTAGATCTATTACCTAATGTCTTTATAAAGAAGA  50

seq1  CTAGTGCACATGTAGCAGAAGATGGCCTAGTGGGCCATCACTGGGAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGCACATGTAGCAGAAGATGGCCTAGTGGGCCATCACTGGGAAGAG  100

seq1  AGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACGCCA  150

seq1  GGGCCAAGAAGAGGGAGTGGGTGGGTAGGGGAGTGGGGGTGGGAGGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAGAAGAGGGAGTGGGTGGGTAGGGGAGTGGGGGTGGGAGGGTAT  200

seq1  GGGGAACTTTTGGGATAGCATTTGAAATGTAAATGAAGAAAATACCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTTTTGGGATAGCATTTGAAATGTAAATGAAGAAAATACCCAAT  250

seq1  TAAAAAAAAAAGAAGACTAGCACTATGTTTCACAAATTCTCTGTTTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAGAAGACTAGCACTATGTTTCACAAATTCTCTGTTTTACC  300

seq1  ATTTAGAGAGGAATATTTCAATGTACTAGATCATCTTCCTATTCCTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAGAGGAATATTTCAATGTACTAGATCATCTTCCTATTCCTGTAT  350

seq1  ATTTTTGTCTTAAACATTTTAGAATATTGATTTATGAAGAAAATCACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCTTAAACATTTTAGAATATTGATTTATGAAGAAAATCACATA  400

seq1  CATCCACAGCCTGCCAGAAGCAACCAATGACAGCATAATAACCTCTGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACAGCCTGCCAGAAGCAACCAATGACAGCATAATAACCTCTGAGC  450

seq1  ATAAGAACAAAAACACTCGTGACTTAATTTATAAATTAGAGAGACTTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACAAAAACACTCGTGACTTAATTTATAAATTAGAGAGACTTTAC  500

seq1  ATTCTTCTTTACCTTTAGATTTACAATAGAATTC  534
      ||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTTACCTTTAGATTTACAATAGAATTC  534

seq1: chr10_38718645_38719744
seq2: B6Ng01-043C08.g_69_1162

seq1  GAATTCCAGGTCAGGCAGGAGTGCATTGTCTCAAAACAACAACAACAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGGCAGGAGTGCATTGTCTCAAAACAACAACAACAATA  50

seq1  TCAGCACACACAAGTTCTACAAGTGATTCAGTAGAGAGAAGTTGGTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACACACAAGTTCTACAAGTGATTCAGTAGAGAGAAGTTGGTCAAA  100

seq1  ATGACCATGTGACTGTAAAAACTGCTTAAAAGGAACATTTGACCACTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCATGTGACTGTAAAAACTGCTTAAAAGGAACATTTGACCACTCAA  150

seq1  TTATTTCACATATTAATAACCTAAATATTTTTAAATGCTAGGTTTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCACATATTAATAACCTAAATATTTTTAAATGCTAGGTTTATTTT  200

seq1  TTAAAGACTATTCTTTGGAGTGCAAAGGAGAAGTTTTACATATTTTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGACTATTCTTTGGAGTGCAAAGGAGAAGTTTTACATATTTTATTC  250

seq1  ATTTCAGCCTATAATAACCTAAATATTTTTAAATGCTAGGTTTATTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGCCTATAATAACCTAAATATTTTTAAATGCTAGGTTTATTTTTT  300

seq1  AAAGACTATTCTTTGGAGTGCAAAGGAGAAGTTTTACATATTTTATTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTATTCTTTGGAGTGCAAAGGAGAAGTTTTACATATTTTATTCAT  350

seq1  TTCAGCCTATCTTGTAAGAAAAATTTGCAAACAAAATTGTTCAGAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCTATCTTGTAAGAAAAATTTGCAAACAAAATTGTTCAGAAAGGA  400

seq1  AGGCTTACTTGAATACATTAATGATATAATAGTCATTCAAACTTACTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTACTTGAATACATTAATGATATAATAGTCATTCAAACTTACTAAA  450

seq1  AAAATACAACAAAGATTATAAATCCCAAGTCTCTCATTTCTTATCTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAACAAAGATTATAAATCCCAAGTCTCTCATTTCTTATCTGCAT  500

seq1  TTCTTCATTTAGCTGATTTACAAAGCCCTGAAGACCACAAAGCCCCTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTTAGCTGATTTACAAAGCCCTGAAGACCACAAAGCCCCTAGC  550

seq1  TGTAAAATGAAGATAACGGAGCTTGCTGTATAGGTTTACTGTGGGCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATGAAGATAACGGAGCTTGCTGTATAGGTTTACTGTGGGCTAAA  600

seq1  ATGAGAAAAGTGTAGGACATGACCTACACTTGAACTTTGTGGACATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAAGTGTAGGACATGACCTACACTTGAACTTTGTGGACATTCAT  650

seq1  GTTCAATTAGTTAAACATTCAATTTAGTTAGTTATTGGGGTCGGCATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTAGTTAAACATTCAATTTAGTTAGTTATTGGGGTCGGCATGTT  700

seq1  CTACTGAAGAAAGACTAAGATTTGCATCGGCCTGAACGTCTTACAACATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAAGAAAGACTAAGATTTGCATCGGCCTGAACGTCTTACAACATG  750

seq1  GAATGTCATTGATAAGAGCTGCATTTAACAAGAGTACTCAGTGCTGCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCATTGATAAGAGCTGCATTTAACAAGAGTACTCAGTGCTGCAAT  800

seq1  CATGATTATTCATGGTTTACAGGTCATGGGTCCAGAGATGTAAACCCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTATTCATGGTTTACAGGTCATGGGTCCAGAGATGTAAACCCTTT  850

seq1  GCATGATATCTCTCTCTCTCTCTCTGTCTCTGTCTCTCTCTTTCCTTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATATCTCTCTCTCTCTCTCTGTCTCTGTCTCTCTCTTTCCTTCTC  900

seq1  CTTCTTCCCCCTCTCTCCCTCTCTCTCTCCTTCCCTCCCTCTCTTCTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCCCCTCTCTCCCTCTCTCTCTCCTTCCCTCCCTCTCTTCTTCC  950

seq1  CTCCCTCCATCCCCCTCTCTCCCTCCTTCTCTCTCTCTTTCTCCTTAAGA  1000
      |||||||||| ||||||||||||| ||||||||||||||||||||| |||
seq2  CTCCCTCCAT-CCCCTCTCTCCCT-CTTCTCTCTCTCTTTCTCCTTTAGA  998

seq1  TAGGGTCTCATGTAGTTCAGGCTGACCTCAGACTCAATGTGCACTCAATG  1050
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  TAGGGTCTCATGTAGTTCA-GCTGACCTCAGACTCAATGTGCACTCATTG  1047

seq1  ATCACCTGGACCTTCGGCTCCTCCTGCTTCTACCTCCAGCCTGGGATGAC  1100
      ||||||| ||||||||||| ||||||||||||||| ||||   |||||||
seq2  ATCACCT-GACCTTCGGCTTCTCCTGCTTCTACCTTCAGC--TGGATGAC  1094