BAC Information

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BAC

Clone NameB6Ng01-045L24
Chromosome10 (Build37)
Map Location 36,805,406 - 36,968,947
singlet/doubletdoublet
Overlap geneMarcks, LOC100040846
Upstream geneLOC667860, Hs3st5, Hdac2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045L24.bB6Ng01-045L24.g
ACCDH871117DH871118
length606891
definitionDH871117|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L24, 5' end.DH871118|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,805,406 - 36,806,011)(36,968,411 - 36,968,947)
sequence
gaattcaaaaataagagccacaaacaagtcagctattaagtaaaaaatgg
aagtgaacacaaaggaaaactatacaaaactttaaaaatctgactgccct
gcttgacctccccagagggacagagactcgggcagcctgggcaaagccat
tactgcaccatcctcaaggcctgagtggatgtcaggacacccctttctgg
atgtgagcctagctggacccaaagcccaaggctggctggaagaacacaca
gaccagaaagacactatggcttggcaagtcttataaagaaaaacatttaa
ttggggctggcttacagtttcagacgtttaggctgctatcatcgtagctg
gaaccttggtgttggagaagctgatagttctacatctttatcctcagcca
gcagaaggaaactgtaccacggtgggtgtagcttgagcataggagacctc
aaagtctgcccccacagtgacttactccctccaacaaagccacaccctat
gggccaagcattctaacacatgagcctcaaaactctaagaaagtataatg
tagggaaaagaaaatagattgatggaagaatagaggaaggaaggaaggaa
gggagg
gaattcttcttcatccttaacctctcctgtaactttaatttttttcaaac
ttcatttttaatgatggttcttaaacattctaaccttccttttagcccac
cacccgccagggatagtggaatagaaaggggaagtagaccagtttagaaa
ggttctttggggcaattcctatctgtgttgtctggaaatcagtagtttag
ttcacaggtcagcaggcagccgtagctccatccactcgcaaacacctcat
ggatgcacaagctatccagttgtgtagaatagggttagcaacagcagtga
catgacctagtaaagacagccaggcctcagcctcagctcaagtcagaagg
agggacctggagggacaccaggagaacttctcagctgtgtctctctcagg
gaaatgaagatgcaagcccacaagcattgcacagctagctgtactagcaa
gccaagctctgtctctgtcactccttggaatcctatttataccctccaaa
catcacatgtcctcgacatgtcttgcctcactcagcatgtgtatccaatc
agcccgagtataaggaagcagcaagaaactgcagcacacagccagaattt
ttttgttgcagtttttctctatggagtcctgacaaatgcagctcaactat
gaaatgcaaggtagaccaatatatgtgcattgttagcagagaatccttca
tcacgtgtcctttcacgtgcttgctttagcagaacatcctctctcctctg
tctgcttcagtgaaacgttcccacactagtctgcctgagcctttcacctg
tgtccattttaatgaaatgttccttcagtatttgccccagcaaacaccat
ttaaacactttccaagacttcagtttctacttcactctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36805406_36806011
seq2: B6Ng01-045L24.b_42_647

seq1  GAATTCAAAAATAAGAGCCACAAACAAGTCAGCTATTAAGTAAAAAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAATAAGAGCCACAAACAAGTCAGCTATTAAGTAAAAAATGG  50

seq1  AAGTGAACACAAAGGAAAACTATACAAAACTTTAAAAATCTGACTGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACACAAAGGAAAACTATACAAAACTTTAAAAATCTGACTGCCCT  100

seq1  GCTTGACCTCCCCAGAGGGACAGAGACTCGGGCAGCCTGGGCAAAGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGACCTCCCCAGAGGGACAGAGACTCGGGCAGCCTGGGCAAAGCCAT  150

seq1  TACTGCACCATCCTCAAGGCCTGAGTGGATGTCAGGACACCCCTTTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCACCATCCTCAAGGCCTGAGTGGATGTCAGGACACCCCTTTCTGG  200

seq1  ATGTGAGCCTAGCTGGACCCAAAGCCCAAGGCTGGCTGGAAGAACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGCCTAGCTGGACCCAAAGCCCAAGGCTGGCTGGAAGAACACACA  250

seq1  GACCAGAAAGACACTATGGCTTGGCAAGTCTTATAAAGAAAAACATTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAAAGACACTATGGCTTGGCAAGTCTTATAAAGAAAAACATTTAA  300

seq1  TTGGGGCTGGCTTACAGTTTCAGACGTTTAGGCTGCTATCATCGTAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCTGGCTTACAGTTTCAGACGTTTAGGCTGCTATCATCGTAGCTG  350

seq1  GAACCTTGGTGTTGGAGAAGCTGATAGTTCTACATCTTTATCCTCAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTGGTGTTGGAGAAGCTGATAGTTCTACATCTTTATCCTCAGCCA  400

seq1  GCAGAAGGAAACTGTACCACGGTGGGTGTAGCTTGAGCATAGGAGACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGGAAACTGTACCACGGTGGGTGTAGCTTGAGCATAGGAGACCTC  450

seq1  AAAGTCTGCCCCCACAGTGACTTACTCCCTCCAACAAAGCCACACCCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGCCCCCACAGTGACTTACTCCCTCCAACAAAGCCACACCCTAT  500

seq1  GGGCCAAGCATTCTAACACATGAGCCTCAAAACTCTAAGAAAGTATAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAGCATTCTAACACATGAGCCTCAAAACTCTAAGAAAGTATAATG  550

seq1  TAGGGAAAAGAAAATAGATTGATGGAAGAATAGAGGAAGGAAGGAAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAAAGAAAATAGATTGATGGAAGAATAGAGGAAGGAAGGAAGGAA  600

seq1  GGGAGG  606
      ||||||
seq2  GGGAGG  606

seq1: chr10_36968411_36968947
seq2: B6Ng01-045L24.g_66_602 (reverse)

seq1  TGCTGAGTGAGGCAAGACATGTCGAGGACATGTGATGTTTGGAGGGTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGTGAGGCAAGACATGTCGAGGACATGTGATGTTTGGAGGGTATA  50

seq1  AATAGGATTCCAAGGAGTGACAGAGACAGAGCTTGGCTTGCTAGTACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGATTCCAAGGAGTGACAGAGACAGAGCTTGGCTTGCTAGTACAGC  100

seq1  TAGCTGTGCAATGCTTGTGGGCTTGCATCTTCATTTCCCTGAGAGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGCAATGCTTGTGGGCTTGCATCTTCATTTCCCTGAGAGAGACA  150

seq1  CAGCTGAGAAGTTCTCCTGGTGTCCCTCCAGGTCCCTCCTTCTGACTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAGAAGTTCTCCTGGTGTCCCTCCAGGTCCCTCCTTCTGACTTGA  200

seq1  GCTGAGGCTGAGGCCTGGCTGTCTTTACTAGGTCATGTCACTGCTGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCTGAGGCCTGGCTGTCTTTACTAGGTCATGTCACTGCTGTTGC  250

seq1  TAACCCTATTCTACACAACTGGATAGCTTGTGCATCCATGAGGTGTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTATTCTACACAACTGGATAGCTTGTGCATCCATGAGGTGTTTGC  300

seq1  GAGTGGATGGAGCTACGGCTGCCTGCTGACCTGTGAACTAAACTACTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGATGGAGCTACGGCTGCCTGCTGACCTGTGAACTAAACTACTGAT  350

seq1  TTCCAGACAACACAGATAGGAATTGCCCCAAAGAACCTTTCTAAACTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGACAACACAGATAGGAATTGCCCCAAAGAACCTTTCTAAACTGGT  400

seq1  CTACTTCCCCTTTCTATTCCACTATCCCTGGCGGGTGGTGGGCTAAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCCCCTTTCTATTCCACTATCCCTGGCGGGTGGTGGGCTAAAAGG  450

seq1  AAGGTTAGAATGTTTAAGAACCATCATTAAAAATGAAGTTTGAAAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAGAATGTTTAAGAACCATCATTAAAAATGAAGTTTGAAAAAAAT  500

seq1  TAAAGTTACAGGAGAGGTTAAGGATGAAGAAGAATTC  537
      |||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTACAGGAGAGGTTAAGGATGAAGAAGAATTC  537