BAC Information

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BAC

Clone NameB6Ng01-047A04
Chromosome10 (Build37)
Map Location 91,981,563 - 91,982,249
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041799, LOC667203
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047A04.bB6Ng01-047A04.g
ACCDH871995DH871996
length1,0021,139
definitionDH871995|Mus musculus domesticus DNA, BAC clone: B6Ng01-047A04, 5' end.DH871996|Mus musculus domesticus DNA, BAC clone: B6Ng01-047A04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgcagttgaatccttctcaacagtctgttttacgggaacactt
cattaccatgacccgcagttctggttccggaatgagggatcttccttgcg
ctggtgatggtaaccgtcccaggttttctcgtcccaggtcttctcgtcct
aggtcttctcgtcccgggtctcagcaccaactcttacccttgttctcgcg
accggccaggaaagaacgcaacaaaccggaatcttctgcggcaaagcttt
attgcttacatcttcaggagccagagagcaagagagaaaaagaacaagaa
caagagcaagagtgcaagagagagcaagaaagcaagataaagaacaagaa
caagaaagcaagagaaagaacaagaaagcaagagagagaaaaagaacaag
aaagcaagagagagaacaagaacaagaaagcaagagaaagaatggcaaaa
ccccgtcccttttaaggagaattatcctccgcctaggacgtattactccc
tgattggctgcagcccatcggctcagttgtcatcacgagaaaggcagaac
acatggcgggaaaactgcccctgcacgtgtgcagattatgtttaccactt
agaacacagctgtcagcgccatcttataatggcgaatgtgagggcggctt
cccacatttgtttttgtcatgggatagcttgttttctccatgaatgataa
ttgagagtttttctgggtatagtagcctgggctggcatttttttcattca
acagcacagctcacttatatggctgatttccctaaaaaacttgcttcaga
tcccttgagtctctaacctttgattcttgaataacaggtttgtgaaaaat
taattggcatttatgtgcattttggagatctgtgctttggtcttcttgtt
tacaaggcaatacttcaaccacttcctacgccatttgaattatttctata
acttctcataattcatatattgttcaaaattttatagttctctaaccatg
tg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgcgat
tccacctcacaccagtcagaatggctaagatcaaaaatgcaggtgacagc
agatgctggcgaggatatggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactgtacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagatggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctattgatgatcacaggctcccatga
gagctagagaaaatacccagagctaaaggatctgcatctatagtgacaca
tatgagctaccagtacccggagctcttgactctagctgcataatatcaag
atgctagtcgcatcacttgagagagccatgacttgcacttatggcccagt
caaggaatatcagccaaatgatgtgccaggaatgcgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91981563_91982249
seq2: B6Ng01-047A04.b_45_684 (reverse)

seq1  CACATTTGCCATTATAAGATGGCACTGACAGCTGTGTTCTAAGTGGTAAA  50
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  CACATTCGCCATTATAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAA  50

seq1  CATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTGTTCTACCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTGTTCTGCCTT  100

seq1  TCTCGTGATGACAACTGGGCCGATGGGCTGCAGCCAATCAGGGAGTAATA  150
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCTCGTGATGACAACTGAGCCGATGGGCTGCAGCCAATCAGGGAGTAATA  150

seq1  CGTCCTAGGCGGAGGATAATTCTCCTTAAAAGGGACGGGGTTTTGCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTAGGCGGAGGATAATTCTCCTTAAAAGGGACGGGGTTTTGCCATT  200

seq1  CTTTTTCT--CTCTCTTGTTCTTGCTTTTTCTCTCTCTTG--TTCTTGCT  246
      |||| |||  || |||||||||||    ||||||||||||  ||||||  
seq2  CTTTCTCTTGCTTTCTTGTTCTTG----TTCTCTCTCTTGCTTTCTTG--  244

seq1  TTCTTTTTCTCTCTCTTGCTTTCTTGTTCTTTTTCTCTCTCTTGCTTTCT  296
      |||||||||||||||||||||||||||||||      |||||||||||||
seq2  TTCTTTTTCTCTCTCTTGCTTTCTTGTTCTT------TCTCTTGCTTTCT  288

seq1  TGTTCTTGTTCTTTCT------------CTCTCTCTTGCACTCTTG----  330
      |||||||||||||| |            ||||||||||||||||||    
seq2  TGTTCTTGTTCTTTATCTTGCTTTCTTGCTCTCTCTTGCACTCTTGCTCT  338

seq1  ----------------CACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCA  364
                      | ||||||||||||||||||||||||||||||||
seq2  TGTTCTTGTTCTTTTTCTCTCTTGCTCTCTGGCTCCTGAAGATGTAAGCA  388

seq1  ATAAAGCTTTGCCGCAGAAGATTCCGGTTTGTTGCGTTC-TTCCTGGCCG  413
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAAAGCTTTGCCGCAGAAGATTCCGGTTTGTTGCGTTCTTTCCTGGCCG  438

seq1  GTCGC--GAACGCGTGTAAGAGTTGGTGCTGAGACCCGGGACGAGAAGAC  461
      |||||  ||||  | ||||||||||||||||||||||             
seq2  GTCGCGAGAACAAGGGTAAGAGTTGGTGCTGAGACCC-------------  475

seq1  CCGGGACGAGAAGACCTGGGATGAGAAGACCTGGGACGAGAAATCCCGGG  511
                                                        
seq2  --------------------------------------------------  475

seq1  ACGAGAAGACCTGGGACGAGAAGACCTGGGACGAGAAGACCTGGGACGAG  561
                  ||||||||||||||| ||||||||||||||||||||||
seq2  ------------GGGACGAGAAGACCTAGGACGAGAAGACCTGGGACGAG  513

seq1  AAAACCTGGGACGGTTACCATCACAGGCGCAAGGAAGATCCCTCATTCCG  611
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  AAAACCTGGGACGGTTACCATCACCAGCGCAAGGAAGATCCCTCATTCCG  563

seq1  GAACCAGAACTGCGGGTCACGGTCATAAAG-GTTCCCGTAAAACAGACTG  660
      ||||||||||||||||||| ||| || ||| |||||||||||||||||||
seq2  GAACCAGAACTGCGGGTCATGGTAATGAAGTGTTCCCGTAAAACAGACTG  613

seq1  TTGAGAAGGATTCAACTGCGTGAATTC  687
      |||||||||||||||||||||||||||
seq2  TTGAGAAGGATTCAACTGCGTGAATTC  640