BAC Information

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BAC

Clone NameB6Ng01-047A07
Chromosome10 (Build37)
Map Location 122,438,962 - 122,586,658
singlet/doubletdoublet
Overlap geneMon2, Usp15
Upstream geneSrgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a, Ppm1h, D630033A02Rik
Downstream geneLOC100042958, AI851790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047A07.bB6Ng01-047A07.g
ACCDH872001DH872002
length1,1181,177
definitionDH872001|Mus musculus domesticus DNA, BAC clone: B6Ng01-047A07, 5' end.DH872002|Mus musculus domesticus DNA, BAC clone: B6Ng01-047A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,585,520 - 122,586,658)(122,438,962 - 122,440,149)
sequence
gaattcattggctttcagtatcatctttgatcagatagactgtcttcatc
tttgaatatttaagccaaagaaagtatagacactgcttaaaagattctga
tttttaaaacaatgagaaaactactttgctcataagtttttcccatttct
gagtaagtaaaaattttagcccatcaaaatagtctgttttacttttagca
tagactgttatcattctaatgaataaaaagtccccagcacctgtgacctg
taaggaaagactgcgctcgctcccccccccccccttccttctaggataag
cttgtaagtgcgctttcattgctgtggctacttaaacttcactattgttt
cacagccagggcgtatctgtttttctttctctgtcatgtgtagaaatgtg
cacaaatactggccttttaaaaactgtagagaagatcttgattttaatta
aattctggtgatgatacattaaattgccaacatgtacctagcaagctttt
agttactaggactagaaagcaggaataataaggcaagcaatgttacaaag
aagaaacttgaaggcaggctctgtgtctgctttataattaagtttgaaac
aaacagctacaagtcctgcactgtgaatttgatttcatcaagcttgcatt
tctctggaccttaatattttcatttaatctttgagttagatcccttttag
gaagactggaagctgacatttattcatttatttatttatttatttattta
tttataagggggtgtgatttttaactgaaagaatcagcatagactcatta
aaaactggctcagcaggatgatcttactggattgtattagaggaaactta
cagggtaaacaggctgaaaccaaccctcaccgtcagctgggagatgggag
tgaggaatgggccagagaaagcagcagagagaggcagtcctttacagaag
cctgagacagtcctgactggcaggcaagcatgctgagagtgaggattgta
tcagagagagcgagagaaggaagggaagacctgactatagaagaaaagag
gtcagtctcctaagcttgacattgaagatttgtatccactacatcaaatc
cctatgaaagggaagggc
gaattccagtccatagctcaactgagatcagccctgcagcccctgccaca
aatacaagctggatatacaagaaggggtcagtgtaggggcaggggctttg
ttaaacagattagaaaaaacagatttaagacaggaacaggtgggtgggag
agatggctcagtggttaagagcactgattgctcttctgaggtcctgagtt
caattcccagaaactacaaccatctatggttgtgatgggatctgatgccc
tcttctggtgtgtctgaagacagctacagtttactcatttaaaaaaaaaa
aaaaaaaaaaaagacaggaacaggtgacagaaatcaagaaatgtcaatca
aaaataagctagaagtaattagtctcttaatttccctttatagaaaaaga
ttgtgttttcttgccaatccacagttctcatgcagagcctctgtcagagg
gtcgattttcagattcaatattctttagattcaaaaggttggcctcaaac
tcagaaatccgcctgcctctgcctcccaagtgctgggattaaaggtgtgc
gccaccactgtccggctatcacatagttcttaatctacaagaaaggcctg
aagcgtcatcatcaccatcacaagtgttatgtgtctgcagcaaaacctat
gaatatttacactgtagagggcacatacagttaccaatgacctcagttcc
atctagttctcttaagaaatctcttggttttgagcaatctttgctactca
ttatgatatcaatgtatttcctccttaattaaatgcgtaccttgggagag
ggcattttccactcagcctctcatcctctatgtagcgatgcagaaaatcc
tgagacctctttaaaagcacagagagtgccattcgtgagatgtagccttc
ctggggtgttgtgactttgttactgaaggaaactggagcaatgtttcaaa
cacattttagaaaatcttctctcaacgaatgtcaattctgctctgtaaaa
tagcaacatttgattataaaaatgtaacacagtgcacattaataacgagc
tagcaagctaggaataagaaatcaataagatggaaaggcactgatgaaca
ccttaggtaatactactatgtaaatttctagtaaataacaatcttctcct
aggagagggtccaagagagaggctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_122585520_122586658
seq2: B6Ng01-047A07.b_45_1162 (reverse)

seq1  GCCCTTCCCTGTCCTAAGAGATTTGATGTAGTTGCTTACAAATCTTCAAT  50
      |||||||||| || | || |||||||||||| ||  ||||||||||||||
seq2  GCCCTTCCCTTTCAT-AGGGATTTGATGTAG-TGGATACAAATCTTCAAT  48

seq1  GTCAAGCCTAAGAGACCCTGACCTCTTTCTCTTTCTCTCTGTTCAGGTCT  100
      ||||||| || ||||  ||||||||||| |||   ||| |  ||||||||
seq2  GTCAAGCTTAGGAGA--CTGACCTCTTT-TCT---TCTATAGTCAGGTCT  92

seq1  TCCCCTCCCTTCTCTCGCTCCTCTCCTGATACAATCCTCACTCCTCAGCA  150
      | |||| |||||||||||| |||| ||||||||||||||||| |||||||
seq2  T-CCCTTCCTTCTCTCGCT-CTCT-CTGATACAATCCTCACT-CTCAGCA  138

seq1  TGCTTGCCCTGCCAGTCAGGACTGTCTCAGGCCTTCTGTAAAGGACTTGC  200
      |||||| |||||||||||||||||||||||| |||||||||||||| |||
seq2  TGCTTG-CCTGCCAGTCAGGACTGTCTCAGG-CTTCTGTAAAGGAC-TGC  185

seq1  CTCTCTTCTGCTGCTTTCTCTGGCCCATTCCTCACTCCCATCCTCCCAGC  250
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCTC-TCTGCTGCTTTCTCTGGCCCATTCCTCACTCCCAT-CTCCCAGC  233

seq1  TGACGGTGAGGGTTGGTTTCAGCCTGTTTACCCTGTAAGTTTCCTCTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGTGAGGGTTGGTTTCAGCCTGTTTACCCTGTAAGTTTCCTCTAAT  283

seq1  ACAATCCAGTAAGATCATCCTGCTGAGCCAGTTTTTAATGAGTCTATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCAGTAAGATCATCCTGCTGAGCCAGTTTTTAATGAGTCTATGCT  333

seq1  GATTCTTTCAGTTAAAAATCACACCCCCTTATAAATAAATAAATAAATAA  400
      ||||||||||||||||||||||||||||||    ||||||||||||||||
seq2  GATTCTTTCAGTTAAAAATCACACCCCCTT----ATAAATAAATAAATAA  379

seq1  ATAAATAAATAAATGAATAAATGTCAGCTTCCAGTCTTCCTAAAAGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATGAATAAATGTCAGCTTCCAGTCTTCCTAAAAGGGAT  429

seq1  CTAACTCAAAGATTAAATGAAAATATTAAGGTCCAGAGAAATGCAAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCAAAGATTAAATGAAAATATTAAGGTCCAGAGAAATGCAAGCTT  479

seq1  GATGAAATCAAATTCACAGTGCAGGACTTGTAGCTGTTTGTTTCAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATCAAATTCACAGTGCAGGACTTGTAGCTGTTTGTTTCAAACTT  529

seq1  AATTATAAAGCAGACACAGAGCCTGCCTTCAAGTTTCTTCTTTGTAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAAGCAGACACAGAGCCTGCCTTCAAGTTTCTTCTTTGTAACAT  579

seq1  TGCTTGCCTTATTATTCCTGCTTTCTAGTCCTAGTAACTAAAAGCTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCCTTATTATTCCTGCTTTCTAGTCCTAGTAACTAAAAGCTTGCT  629

seq1  AGGTACATGTTGGCAATTTAATGTATCATCACCAGAATTTAATTAAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACATGTTGGCAATTTAATGTATCATCACCAGAATTTAATTAAAATC  679

seq1  AAGATCTTCTCTACAGTTTTTAAAAGGCCAGTATTTGTGCACATTTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTTCTCTACAGTTTTTAAAAGGCCAGTATTTGTGCACATTTCTAC  729

seq1  ACATGACAGAGAAAGAAAAACAGATACGCCCTGGCTGTGAAACAATAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACAGAGAAAGAAAAACAGATACGCCCTGGCTGTGAAACAATAGTG  779

seq1  AAGTTTAAGTAGCCACAGCAATGAAAGCGCACTTACAAGCTTATCCTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAAGTAGCCACAGCAATGAAAGCGCACTTACAAGCTTATCCTAGA  829

seq1  AGGAAGGGGGGGGGGGGGAGCGAGCGCAGTCTTTCCTTACAGGTCACAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGGGGGGGGGGGAGCGAGCGCAGTCTTTCCTTACAGGTCACAGG  879

seq1  TGCTGGGGACTTTTTATTCATTAGAATGATAACAGTCTATGCTAAAAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGACTTTTTATTCATTAGAATGATAACAGTCTATGCTAAAAGTA  929

seq1  AAACAGACTATTTTGATGGGCTAAAATTTTTACTTACTCAGAAATGGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACTATTTTGATGGGCTAAAATTTTTACTTACTCAGAAATGGGAA  979

seq1  AAACTTATGAGCAAAGTAGTTTTCTCATTGTTTTAAAAATCAGAATCTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATGAGCAAAGTAGTTTTCTCATTGTTTTAAAAATCAGAATCTTT  1029

seq1  TAAGCAGTGTCTATACTTTCTTTGGCTTAAATATTCAAAGATGAAGACAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGTGTCTATACTTTCTTTGGCTTAAATATTCAAAGATGAAGACAG  1079

seq1  TCTATCTGATCAAAGATGATACTGAAAGCCAATGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGATCAAAGATGATACTGAAAGCCAATGAATTC  1118

seq1: chr10_122438962_122440149
seq2: B6Ng01-047A07.g_67_1243

seq1  GAATTCCAGTCCATAGCTCAACTGAGATCAGCCCTGCAGCCCCTGCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCCATAGCTCAACTGAGATCAGCCCTGCAGCCCCTGCCACA  50

seq1  AATACAAGCTGGATATACAAGAAGGGGTCAGTGTAGGGGCAGGGGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGCTGGATATACAAGAAGGGGTCAGTGTAGGGGCAGGGGCTTTG  100

seq1  TTAAACAGATTAGAAAAAACAGATTTAAGACAGGAACAGGTGGGTGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGATTAGAAAAAACAGATTTAAGACAGGAACAGGTGGGTGGGAG  150

seq1  AGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCTGAGGTCCTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCTGAGGTCCTGAGTT  200

seq1  CAATTCCCAGAAACTACAACCATCTATGGTTGTGATGGGATCTGATGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCCAGAAACTACAACCATCTATGGTTGTGATGGGATCTGATGCCC  250

seq1  TCTTCTGGTGTGTCTGAAGACAGCTACAGTTTACTCATTTAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGTGTGTCTGAAGACAGCTACAGTTTACTCATTTAAAAAAAAAA  300

seq1  AAAAAAAAAAAAGACAGGAACAGGTGACAGAAATCAAGAAATGTCAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGACAGGAACAGGTGACAGAAATCAAGAAATGTCAATCA  350

seq1  AAAATAAGCTAGAAGTAATTAGTCTCTTAATTTCCCTTTATAGAAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGCTAGAAGTAATTAGTCTCTTAATTTCCCTTTATAGAAAAAGA  400

seq1  TTGTGTTTTCTTGCCAATCCACAGTTCTCATGCAGAGCCTCTGTCAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTCTTGCCAATCCACAGTTCTCATGCAGAGCCTCTGTCAGAGG  450

seq1  GTCGATTTTCAGATTCAATATTCTTTAGATTCAAAAGGTTGGCCTCAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATTTTCAGATTCAATATTCTTTAGATTCAAAAGGTTGGCCTCAAAC  500

seq1  TCAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGC  550

seq1  GCCACCACTGTCCGGCTATCACATAGTTCTTAATCTACAAGAAAGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACTGTCCGGCTATCACATAGTTCTTAATCTACAAGAAAGGCCTG  600

seq1  AAGCGTCATCATCACCATCACAAGTGTTATGTGTCTGCAGCAAAACCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTCATCATCACCATCACAAGTGTTATGTGTCTGCAGCAAAACCTAT  650

seq1  GAATATTTACACTGTAGAGGGCACATACAGTTACCAATGACCTCAGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTACACTGTAGAGGGCACATACAGTTACCAATGACCTCAGTTCC  700

seq1  ATCTAGTTCTCTTAAGAAATCTCTTGGTTTTGAGCAATCTTTGCTACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTTCTCTTAAGAAATCTCTTGGTTTTGAGCAATCTTTGCTACTCA  750

seq1  TTATGATATCAATGTATTTCCTCCTTAATTAAATGCGTACCTTGGGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATATCAATGTATTTCCTCCTTAATTAAATGCGTACCTTGGGAGAG  800

seq1  GGCATTTTCCACTCAGCCTCTCATCCTCTATGTAGCGATGCAGAACATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGCATTTTCCACTCAGCCTCTCATCCTCTATGTAGCGATGCAGAAAATCC  850

seq1  TGAGACCTCTTTAAAAGCACAGAGAGTGCCATTCGTGAGATGTAGCCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTCTTTAAAAGCACAGAGAGTGCCATTCGTGAGATGTAGCCTTC  900

seq1  CTGGGGTGTTGTGACTTTGTTACTGAAGGAAAACTGGAGCAATGTTTCAA  950
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  CTGGGGTGTTGTGACTTTGTTACTGAAGG-AAACTGGAGCAATGTTTC-A  948

seq1  AACACATTTTAGAAAATTCTTCTCTCAAACGAATGTCAATTTCTGCTTCT  1000
      |||||||||||||||| ||||||||| |||||||||||| |||||| |||
seq2  AACACATTTTAGAAAA-TCTTCTCTC-AACGAATGTCAA-TTCTGC-TCT  994

seq1  GTAAAATTAGCAACATTTGATTATTAAAAAATGTTAACACAGTGCACATT  1050
      |||||| |||||||||||||||||  ||||||| ||||||||||||||||
seq2  GTAAAA-TAGCAACATTTGATTAT--AAAAATG-TAACACAGTGCACATT  1040

seq1  AATAACGAGCCTAGCAAGCTAGGAATAAGGATATCAATAAGAT-GAAAGG  1099
      ||||||||| |||||||||||||||||| || ||||||||||| ||||||
seq2  AATAACGAG-CTAGCAAGCTAGGAATAA-GAAATCAATAAGATGGAAAGG  1088

seq1  CACTGATGAACAACCTTTAGTTAATACTACTTAGTAAATATCTAGTAAAT  1149
      ||||||||||||  | |||| ||||||||||  |||||| ||||||||||
seq2  CACTGATGAACA--CCTTAGGTAATACTACTATGTAAATTTCTAGTAAAT  1136

seq1  AACAATCTT-TCCTCTAGGAAGGTGCAA-AGAGAGGCTGCC  1188
      ||||||||| ||||    || ||| ||| ||||||||||||
seq2  AACAATCTTCTCCTAGGAGAGGGTCCAAGAGAGAGGCTGCC  1177