BAC Information

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BAC

Clone NameB6Ng01-047B20
Chromosome10 (Build37)
Map Location 123,875,615 - 123,876,791
singlet/doubletsinglet
Overlap genenone
Upstream geneAI851790
Downstream gene4930503E24Rik, LOC671416, Slc16a7, LOC100042987, EG668313
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047B20.bB6Ng01-047B20.g
ACCDH872064DH872065
length1,1381,153
definitionDH872064|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B20, 5' end.DH872065|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattattttacacaataactttaagagttaaataacagaataat
gtttatatataattattttcatcctggggctatacagatcatttcacatc
tttgctacatgaaaatctatacagatacttcttgagacattgatatcaat
cttttggacatacaagctgaaatgagatggctggcactatgttaaaggat
ccccaaggctgttttcatagtggtagcactatgcctcctttcaattcaga
gtgcaaacaatttcattttctctatatctaccaaggcctgtaacctgttt
tacaaattaatgacagggatgggttatgtgtgcttttagtttgtattttc
ctaattatacaggatacaaaacaatggcacttctatctgaagattacgaa
cacatgtggaaagcagccagctgtatactgtctatgtttagtatttccat
ttgtatgagttttctgcaagattccatctgaggcagaaagtaaagtgatc
gttcaaaatgaaagagagaaagagaatgtgtttaatggctttgctggtac
acttatgaaaactgagtatgtctgtgaggtctttgaataatattgtatgt
ataataaattaataattaaatcattgtcagtagtgtagacatatgtgtgc
ttctcctggtcacacttacacacatcaaaacctcctgacacgcagactat
ccactccatcttgtttattttcatccagtagagtcagccagacaaattta
tgccactattcaattacctttaccagactgtgcttccaaaccatcgtaca
aactcgtggatgttctactcttatttacaatttagggtttttttcttttc
ttagaatgtttttaactttttccttgaaaattcagatgatagatttatat
ttgaccttccccagctgcttcagatccccttgcttccctatcttctctta
aaaaaaataaaagagcaacaacaaagaatcatgagtcacccatagtcatc
attctcaaagctcacgcaattctgtgagcttttctttctcacaagaaaca
cgcaaggcatggtcctcaaattctgtctggactttgtattaatgcaattt
caagctcagcaatcttttcatgatatgatacatagggt
gaattcatctggaaaggcaaaaaaaaaaaaaaaaaaaaacccagaatagt
gaaaacaattcttaacaataaaagaacagctgggggaattaccatccttg
acctcaagctttactacagagcaatagtgataaaaaaaacaaacaaaaaa
aaaaacagcatggtattggtacagagacagatatgttgatcaatagaatt
gaattgtagtcccagaaataaaaccagacactcacagtcacctgaccttt
gacaaagatgacaaaaatatacaatggaaaaaaagaaagcatcttcaata
aatggtgctggtctaactggctgtatgtatgtagaagaatgaaaattgac
ccatatttgtcaccttgtacaaagttcaagtccaagtggatccagaacct
caacataaaaccaaatacactgaatctaatagaagagaaagtgggaaaga
gtgttgaactcattggtacagggggaaatttcagaaacagaactccaatg
gttcatgctctaagatcaacaattgataaatgggacctcatgaaactgga
aaacttctgcaaggcaaaggacatagttgataagacaagtgggcaaccta
cagattgggaaaaaaaatcttcacaaaccccacatccgatagagggttaa
tatccaaaatatataaagaactcaagaagttaatttctaaaagaccaaac
aacccaataaaaaataatggcatatagaactaaactgagaattcacaact
gaggaatctcaaatggctgaaaagcacctaaagaaatattcaaagtcctt
agtaatcagaagaaatgcaaatcaaaatgaccctgagattccacattcta
cagtcagatggctaagagaaaatgtcatttctactcaaaggcctatggat
ttccctatattatctttagaatatatattgcatttatgttatgtctgtga
ttgttgaaatgtaagattatatttagatttgcagatgcttatattaacat
caatcatcatagtaaattactttatagtgtgacttctatgcttgcattta
gctgatcatgtgatattatgacgattcaactgagcttaattaatcttatg
atcgtgataattgagtacatgctgactaagagtgttctccgaatgcaagt
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123875615_123876791
seq2: B6Ng01-047B20.b_41_1178 (reverse)

seq1  ACCCTATGTATTACATATCATGAAAAGGAATATGCTGAAGCTTGAAATTT  50
      |||||||||||  ||||||||||||||  || ||||| ||||||||| ||
seq2  ACCCTATGTAT--CATATCATGAAAAG--AT-TGCTG-AGCTTGAAA-TT  43

seq1  GCATTAATACATAGTTCTCAAGGAACAGAAATGTGAAGGACCAATGCCCC  100
      ||||||||||| ||   || ||  |||| ||| || |||||| |||  ||
seq2  GCATTAATACAAAG---TCCAG--ACAG-AATTTG-AGGACC-ATG--CC  83

seq1  TGCCGTGTGTCTATGTTGAAGAAAGAAAAGCTTCACAGAATTGCGGTGGA  150
      |  ||||| ||| |||   |||||||||||| |||||||||||||   ||
seq2  TTGCGTGTTTCT-TGT--GAGAAAGAAAAGC-TCACAGAATTGCG--TGA  127

seq1  GCTTTTGAGAATGATTGGACTATGGGGTTGGACTCAATGATTTCTTTGTT  200
      || ||||||||||||  |||||||||    ||||| |||| |||||||||
seq2  GC-TTTGAGAATGAT--GACTATGGG---TGACTC-ATGA-TTCTTTGTT  169

seq1  GTTTGCTTCTTTTATTTTTTTTTAAAGAGAAGGATAGGGAAGCAAGGGGG  250
      | |||| |||||||||||||||  ||||||| ||||||||||||| ||||
seq2  G-TTGC-TCTTTTATTTTTTTT--AAGAGAA-GATAGGGAAGCAA-GGGG  213

seq1  ATCTGGAAGCAGCTGGGGGAAGGTCAAATATAAATCTATCATCTGAATTT  300
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATCT-GAAGCAGCT-GGGGAAGGTCAAATATAAATCTATCATCTGAATTT  261

seq1  TCAAGGAAAAAGTTAAAAACATTCTAAGAAAAGAAAAAAACCCTAAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAAAAAGTTAAAAACATTCTAAGAAAAGAAAAAAACCCTAAATTG  311

seq1  TAAATAAGAGTAGAACATCCACGAGTTTGTACGATGGTTTGGAAGCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGAGTAGAACATCCACGAGTTTGTACGATGGTTTGGAAGCACAG  361

seq1  TCTGGTAAAGGTAATTGAATAGTGGCATAAATTTGTCTGGCTGACTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAAAGGTAATTGAATAGTGGCATAAATTTGTCTGGCTGACTCTAC  411

seq1  TGGATGAAAATAAACAAGATGGAGTGGATAGTCTGCGTGTCAGGAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAAAATAAACAAGATGGAGTGGATAGTCTGCGTGTCAGGAGGTTT  461

seq1  TGATGTGTGTAAGTGTGACCAGGAGAAGCACACATATGTCTACACTACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGTGTAAGTGTGACCAGGAGAAGCACACATATGTCTACACTACTG  511

seq1  ACAATGATTTAATTATTAATTTATTATACATACAATATTATTCAAAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATTTAATTATTAATTTATTATACATACAATATTATTCAAAGACC  561

seq1  TCACAGACATACTCAGTTTTCATAAGTGTACCAGCAAAGCCATTAAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGACATACTCAGTTTTCATAAGTGTACCAGCAAAGCCATTAAACAC  611

seq1  ATTCTCTTTCTCTCTTTCATTTTGAACGATCACTTTACTTTCTGCCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTTCTCTCTTTCATTTTGAACGATCACTTTACTTTCTGCCTCAG  661

seq1  ATGGAATCTTGCAGAAAACTCATACAAATGGAAATACTAAACATAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATCTTGCAGAAAACTCATACAAATGGAAATACTAAACATAGACAG  711

seq1  TATACAGCTGGCTGCTTTCCACATGTGTTCGTAATCTTCAGATAGAAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGCTGGCTGCTTTCCACATGTGTTCGTAATCTTCAGATAGAAGTG  761

seq1  CCATTGTTTTGTATCCTGTATAATTAGGAAAATACAAACTAAAAGCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTTTTGTATCCTGTATAATTAGGAAAATACAAACTAAAAGCACAC  811

seq1  ATAACCCATCCCTGTCATTAATTTGTAAAACAGGTTACAGGCCTTGGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCATCCCTGTCATTAATTTGTAAAACAGGTTACAGGCCTTGGTAG  861

seq1  ATATAGAGAAAATGAAATTGTTTGCACTCTGAATTGAAAGGAGGCATAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGAAAATGAAATTGTTTGCACTCTGAATTGAAAGGAGGCATAGT  911

seq1  GCTACCACTATGAAAACAGCCTTGGGGATCCTTTAACATAGTGCCAGCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCACTATGAAAACAGCCTTGGGGATCCTTTAACATAGTGCCAGCCA  961

seq1  TCTCATTTCAGCTTGTATGTCCAAAAGATTGATATCAATGTCTCAAGAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTCAGCTTGTATGTCCAAAAGATTGATATCAATGTCTCAAGAAG  1011

seq1  TATCTGTATAGATTTTCATGTAGCAAAGATGTGAAATGATCTGTATAGCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTATAGATTTTCATGTAGCAAAGATGTGAAATGATCTGTATAGCC  1061

seq1  CCAGGATGAAAATAATTATATATAAACATTATTCTGTTATTTAACTCTTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATGAAAATAATTATATATAAACATTATTCTGTTATTTAACTCTTA  1111

seq1  AAGTTATTGTGTAAAATAATGGAATTC  1177
      |||||||||||||||||||||||||||
seq2  AAGTTATTGTGTAAAATAATGGAATTC  1138