BAC Information

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BAC

Clone NameB6Ng01-049E06
Chromosome10 (Build37)
Map Location 123,932,796 - 124,029,736
singlet/doubletdoublet
Overlap gene4930503E24Rik
Upstream geneAI851790
Downstream geneLOC671416, Slc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049E06.bB6Ng01-049E06.g
ACCDH873578DH873579
length7571,056
definitionDH873578|Mus musculus domesticus DNA, BAC clone: B6Ng01-049E06, 5' end.DH873579|Mus musculus domesticus DNA, BAC clone: B6Ng01-049E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,932,796 - 123,933,530)(124,028,683 - 124,029,736)
sequence
gaattctaatgatagaacctagtggggaaacccctactcaattcccaatc
tggcgtgcacccaaagaatcacgaaaaggccttgatgtaattacaggagg
tagtttaatgatggagctccggaccaacagacatgcatcccacacaagag
ataacggaggatgtcggccacgaggctcgaaagctaggggtttttatggg
gtaaggggcttaggggtgtggaattcagcatagcaacacactattggctt
attcaaacatcagcagaaaaattacatgtacgtgcagagtgtcagagttc
tgtgagctgttgactcagttcagagagccctgttatgtcctcacattcct
ctttatctttaggtcaagatgttcccaggaatgttttaactacaggacat
accccggatttgtttttctttattttcagccccaggcagcctctaggctc
acaaacaaccagcaatttctgagtactttatatcacttacaggtcttgaa
atttcatctttctttcactaataggagtgagctgataaagaagcacatac
ctgggatactaccaagttcatgacatagggaaagaagaaaaatgaaaata
gaagaaaaagaacaattcaaggagaagtaagacaatgctaatgagcctca
tgtcgaacttcccaggacacccagctcacacttgggggaaattcatcatg
catctcaccatagagtttatgatggtatgggatgtattttcatatagggg
ggaaatt
gaattccaacaactatacctttttaaagcttctgtttattagatcggtaa
aagggcaaaaatctaaattttagaattaaagaaaatggtggactgttata
aatgtgatgaatgagatagagttaagtgctaatgggaatgtctatatcta
tatagtttaaaatatttaagaaaaaaaacaataaagtattcatggtgaaa
gccaaatttccacttttttagaatacatataaacaaaaatattggcagaa
atttatgaataactcttcctgaagtttgaaggatattaattagctagaat
tttaacagcatgtgatttagagctaagggaagctgtggggatatcctgta
ggcataattaaacaatggccggagtaatccaacagaaacaaaacattcaa
aaataattacatatagaaatatgatatataatacattatttgaaggctac
atttagcaatattttaatatatctgatagatgctttcttgtatctaaata
gtagaatttggaggtttgatcagagtggagaaatcttgaaaactacaccg
taaacactggaaaacaaactagcttaagaaagtgtaatactaaagaaatc
tgtactttatttctttgagaatgctctctttagatccacatccccatttt
aattttttttaattcttagatcttttgtttctctacatattatagatagt
aacactctgtcagatatgtagatagtaaagaatttttaacactatcctag
gctggttctttgcatgagtgattgattgtgccttttggggatatagagtt
tagtttcattagttccatttcctcaattgccggtgcatatgtcattatta
tcatgggtcctggtccttgtcctaattcttgcattgacatgtccaagcat
ctctactctggccggtttcaaaggagctagtcttatgtttaaatgctcct
attcgttggtgtgagattcctacgagaggaaggtaggaatctatgtctat
ttttttccattgaagctatccaagtgactcgaatacttgttgaagaagaa
actttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123932796_123933530
seq2: B6Ng01-049E06.b_63_799

seq1  AGTGGGGAAACCCCTACTCAATTCCCAATCTGGCGTGCACCCAAAGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAAACCCCTACTCAATTCCCAATCTGGCGTGCACCCAAAGAATC  50

seq1  ACGAAAAGGCCTTGATGTAATTACAGGAGGTAGTTTAATGATGGAGCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAAGGCCTTGATGTAATTACAGGAGGTAGTTTAATGATGGAGCTCC  100

seq1  GGACCAACAGACATGCATCCCACACAAGAGATAACGGAGGATGTCGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAACAGACATGCATCCCACACAAGAGATAACGGAGGATGTCGGCCA  150

seq1  CGAGGCTCGAAAGCTAGGGGTTTTTATGGGGTAAGGGGCTTAGGGGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCTCGAAAGCTAGGGGTTTTTATGGGGTAAGGGGCTTAGGGGTGTG  200

seq1  GAATTCAGCATAGCAACACACTATTGGCTTATTCAAACATCAGCAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATAGCAACACACTATTGGCTTATTCAAACATCAGCAGAAAA  250

seq1  ATTACATGTACGTGCAGAGTGTCAGAGTTCTGTGAGCTGTTGACTCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTACGTGCAGAGTGTCAGAGTTCTGTGAGCTGTTGACTCAGTT  300

seq1  CAGAGAGCCCTGTTATGTCCTCACATTCCTCTTTATCTTTAGGTCAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCCCTGTTATGTCCTCACATTCCTCTTTATCTTTAGGTCAAGAT  350

seq1  GTTCCCAGGAATGTTTTAACTACAGGACATACCCCGGATTTGTTTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGGAATGTTTTAACTACAGGACATACCCCGGATTTGTTTTTCTT  400

seq1  TATTTTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCT  450

seq1  GAGTACTTTATATCACTTACAGGTCTTGAAATTTCATCTTTCTTTCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTTTATATCACTTACAGGTCTTGAAATTTCATCTTTCTTTCACTA  500

seq1  ATAGGAGTGAGCTGATAAAGAAGCACATACCTGGGATACTACCAAGTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGTGAGCTGATAAAGAAGCACATACCTGGGATACTACCAAGTTCA  550

seq1  TGACATAGGGAAAGAAGAAAAATGAAAATAGAAGAAAAAGAACAATTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGGGAAAGAAGAAAAATGAAAATAGAAGAAAAAGAACAATTCAA  600

seq1  GGAGAAGTAAGACAATGCTAATGAGCCTCATGTCGAACTTCCCAGGACA-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGAGAAGTAAGACAATGCTAATGAGCCTCATGTCGAACTTCCCAGGACAC  650

seq1  CCAGCTCACACTTGGGGGAAATTCATCATGCATCTCACCATAGAGTTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCACACTTGGGGGAAATTCATCATGCATCTCACCATAGAGTTTAT  700

seq1  GATGGTAT-GGATGTATTTTTCATATA-GGGGGAAATT  735
      |||||||| ||||||| |||||||||| ||||||||||
seq2  GATGGTATGGGATGTA-TTTTCATATAGGGGGGAAATT  737

seq1: chr10_124028683_124029736
seq2: B6Ng01-049E06.g_66_1121 (reverse)

seq1  AAAAGTTATCATCTTCAACAAGTATTTCTGGTCAACCTTGGTATAGCTTC  50
      ||||||| || ||||||||||||| |||  ||||  ||||| ||||||||
seq2  AAAAGTT-TCTTCTTCAACAAGTA-TTCGAGTCA--CTTGG-ATAGCTTC  45

seq1  ATATGG-AAAAAATAGACATGGATTCCTACCTTTCTCTCTGTAGAAAACT  99
      | |||| ||||||||||||| |||||||||||| ||||| |||| || ||
seq2  A-ATGGAAAAAAATAGACATAGATTCCTACCTTCCTCTC-GTAGGAATCT  93

seq1  CAACACCAAACGAATA-GAGCACTTCAACATAAGACT-GCTCCTTTG-AA  146
      | ||||| |||||||| ||||| || ||||||||||| ||||||||| ||
seq2  C-ACACC-AACGAATAGGAGCATTTAAACATAAGACTAGCTCCTTTGAAA  141

seq1  CCTGACAGAGTAGAAGATGCTTGAACATGTCAATGCA--GATTAGGACAA  194
      || | |||||||| ||||||||| |||||||||||||   ||||||||||
seq2  CCGGCCAGAGTAG-AGATGCTTGGACATGTCAATGCAAGAATTAGGACAA  190

seq1  GGA-CAGGA-CCATGATAATAAAGACATATGCACCGGCAATTGA-GAAAT  241
      ||| ||||| |||||||||||| ||||||||||||||||||||| |||||
seq2  GGACCAGGACCCATGATAATAATGACATATGCACCGGCAATTGAGGAAAT  240

seq1  GGAACTTAATGAAACTAAAACTCTATATCCCC-AAAGGCACAATCAATCA  290
      ||||| |||||||||| ||||||||||||||| |||||||||||||||||
seq2  GGAAC-TAATGAAACT-AAACTCTATATCCCCAAAAGGCACAATCAATCA  288

seq1  CTCATGCAAAGAACCAGCCTA-GATAGTGTTAAAAATTCTTTACTATCTA  339
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCATGCAAAGAACCAGCCTAGGATAGTGTTAAAAATTCTTTACTATCTA  338

seq1  CATATCTGACAGAGTGTTACTATCTATAATATGTAGAG-AACAAAAGATC  388
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CATATCTGACAGAGTGTTACTATCTATAATATGTAGAGAAACAAAAGATC  388

seq1  TAAGAATTAAAAAAAATTAAAATTGGGATGTGGATCTAAAGAGAGCATTC  438
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAAGAATTAAAAAAAATTAAAATGGGGATGTGGATCTAAAGAGAGCATTC  438

seq1  TC-AAGAAATAAAGTACAGATTTC-TTAGTATTACACTTTCTTAAGCTAG  486
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCAAAGAAATAAAGTACAGATTTCTTTAGTATTACACTTTCTTAAGCTAG  488

seq1  TTTGTTTTCCAGTGTTTACGGTGTAGTTTTCAAGATTTCTCCACTCTGAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTCCAGTGTTTACGGTGTAGTTTTCAAGATTTCTCCACTCTGAT  538

seq1  CAAACCTCCAAATTCTACTATTTAGATACAAGAAAGCATCTATCAGATAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTCCAAATTCTACTATTTAGATACAAGAAAGCATCTATCAGATAT  588

seq1  ATTAAAATATTGCTAAATGTAGCCTTCAAATAATGTATTATATATCATAT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATATTGCTAAATGTAGCCTTCAAATAATGTATTATATATCATAT  638

seq1  TTCTATATGTAATTATTTTTGAATGTTTTGTTTCTGTTGGATTACTCCGG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATGTAATTATTTTTGAATGTTTTGTTTCTGTTGGATTACTCCGG  688

seq1  CCATTGTTTAATTATGCCTACAGGATATCCCCACAGCTTCCCTTAGCTCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTTTAATTATGCCTACAGGATATCCCCACAGCTTCCCTTAGCTCT  738

seq1  AAATCACATGCTGTTAAAATTCTAGCTAATTAATATCCTTCAAACTTCAG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACATGCTGTTAAAATTCTAGCTAATTAATATCCTTCAAACTTCAG  788

seq1  GAAGAGTTATTCATAAATTTCTGCCAATATTTTTGTTTATATGTATTCTA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTATTCATAAATTTCTGCCAATATTTTTGTTTATATGTATTCTA  838

seq1  AAAAAGTGGAAATTTGGCTTTCACCATGAATACTTTATTGTTTTTTTTCT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGGAAATTTGGCTTTCACCATGAATACTTTATTGTTTTTTTTCT  888

seq1  TAAATATTTTAAACTATATAGATATAGACATTCCCATTAGCACTTAACTC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTAAACTATATAGATATAGACATTCCCATTAGCACTTAACTC  938

seq1  TATCTCATTCATCACATTTATAACAGTCCACCATTTTCTTTAATTCTAAA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATTCATCACATTTATAACAGTCCACCATTTTCTTTAATTCTAAA  988

seq1  ATTTAGATTTTTGCCCTTTTACCGATCTAATAAACAGAAGCTTTAAAAAG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATTTTTGCCCTTTTACCGATCTAATAAACAGAAGCTTTAAAAAG  1038

seq1  GTATAGTTGTTGGAATTC  1054
      ||||||||||||||||||
seq2  GTATAGTTGTTGGAATTC  1056