BAC Information

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BAC

Clone NameB6Ng01-049O03
Chromosome10 (Build37)
Map Location 27,308,586 - 27,447,974
singlet/doubletdoublet
Overlap geneLama2
Upstream geneLOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk, E430004N04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049O03.bB6Ng01-049O03.g
ACCDH874009DH874010
length1,173951
definitionDH874009|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O03, 5' end.DH874010|Mus musculus domesticus DNA, BAC clone: B6Ng01-049O03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,308,586 - 27,309,754)(27,447,021 - 27,447,974)
sequence
gaattctccgtgtttgccttcgaatgtggaagaaaacaggaagctgacct
acatgtggaagagtgacaatcaggcttgggaagaggggtcacatgggatg
ggatagataaaaggaggcgggatctgattggatcacactgtttaaatata
ttgaaaagtcacactgaagctcattaatgtatacagtcaatatacactaa
tcaaatatttttaaatgatgttgggagctggaaagacagtgcagcaatga
agaatgaattttgaatttccagcattgaggtcatgcatcgcactatttca
tgcgacctttatacatgcaggggatacaacatagttttctagttttctag
ggtctgtaccacccacacacacacacacacacacacacacatatgcacac
atgcacacaattaaatataaaataaacttttaaattacttagagtttttc
ttctttcatgatagactttattataagctagaatagtaataagcttacat
tcaaatggtttttaatactgataattctgtctccctggttgtaagcctca
actaatttctgtgtctgtctgtgaataatgaattcacactgcagcctacc
attccctctccctgagttgctttgttccgatctgcccatcaaaagttctc
tcgtctgatggactcagtacaaataacatcttctttgtaatactggccct
attcctatgaaatggaaattcttttcccttagaatctaaaaacactttaa
taatcttattaaaacccctccatatacactgtgcctatgtttacctcatt
atatagatacattattttttctactcatgtaattctagagggagaaaatt
atacttttgtcatatttgtgtctacattgcaagttttttttctcacttga
agcacctggttctaagcattcctataatagagcttttttttcatccttta
ccccatcatcccattgctttatctgtaagaatactgccaggggaggcgga
tgagaaagaaattaacacatatattgatttggaccactgagggggctcag
caaatgaagttgcttttgcctcttcccaacccaatgaatggaaaaaaaaa
accaagaacttgcatgtttgttcttatgccctcccagaacactgggagat
gcgtacaaataaatcatggcatg
gaattccatttcccataaagtccttctatatttcttggaccctttatagg
tggggatatgggataaactttaaacttaagacataagctaaaataaatag
ttttttttccagaaaattgctttgttcttttttcattgaaaggctagttt
atcagcgtgtgttatgttatgaatcacagttaaagaggtggcttagattt
tctacttgtatgccatctgcagtaaaagccatactataggttaaaattgg
gtcccacccagggcttgggccgctgggtgaggtgggacgctggaagtcta
actgtgtgtaccccacactgtgctgggtgggcattgggctgtgagaagcc
acaggaccccacttcgaagcacagcctgaggaccccactgaactactgga
tttgagcttgggggtacccgggtcctgcacggaggtcggggactgcaggt
tctcactctgcagaccccgctggatgtcacacaaaagctgagatggagtg
tggtccagtagggatggctctggtacagggcagaagggaaaagggcaggg
aggagagtactcctgctggttctcatagggatgaaaatccttgacttgct
cggtcagttggcagtggctttggttggtggaaactatgtctaggaactct
gagaagtctcctgcaggagattagatgtgcgtatctctttagaggaagac
ctgctccattgcttcagcacagcagatcctgatgagaagaaacagtccat
ggtttcaaggcatttattgtagaaaggcacagagatggagagattagaga
agcagaggcagtatcaaatggggaaggtacagagccttttcttcatcttt
tctcagctgtcctgatcttaactaaccatcctcacactgatatgctgttg
ttatcttatctgtgtggatagctatgcctagagttatcgatgtgagacag
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_27308586_27309754
seq2: B6Ng01-049O03.b_43_1215

seq1  GAATTCTCCGTGTTTGCCTTCGAATGTGGAAGAAAACAGGAAGCTGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTGTTTGCCTTCGAATGTGGAAGAAAACAGGAAGCTGACCT  50

seq1  ACATGTGGAAGAGTGACAATCAGGCTTGGGAAGAGGGGTCACATGGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGAAGAGTGACAATCAGGCTTGGGAAGAGGGGTCACATGGGATG  100

seq1  GGATAGATAAAAGGAGGCGGGATCTGATTGGATCACACTGTTTAAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATAAAAGGAGGCGGGATCTGATTGGATCACACTGTTTAAATATA  150

seq1  TTGAAAAGTCACACTGAAGCTCATTAATGTATACAGTCAATATACACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGTCACACTGAAGCTCATTAATGTATACAGTCAATATACACTAA  200

seq1  TCAAATATTTTTAAATGATGTTGGGAGCTGGAAAGACAGTGCAGCAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATTTTTAAATGATGTTGGGAGCTGGAAAGACAGTGCAGCAATGA  250

seq1  AGAATGAATTTTGAATTTCCAGCATTGAGGTCATGCATCGCACTATTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATTTTGAATTTCCAGCATTGAGGTCATGCATCGCACTATTTCA  300

seq1  TGCGACCTTTATACATGCAGGGGATACAACATAGTTTTCTAGTTTTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGACCTTTATACATGCAGGGGATACAACATAGTTTTCTAGTTTTCTAG  350

seq1  GGTCTGTACCACCCACACACACACACACACACACACACACATATGCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTACCACCCACACACACACACACACACACACACACATATGCACAC  400

seq1  ATGCACACAATTAAATATAAAATAAACTTTTAAATTACTTAGAGTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACAATTAAATATAAAATAAACTTTTAAATTACTTAGAGTTTTTC  450

seq1  TTCTTTCATGATAGACTTTATTATAAGCTAGAATAGTAATAAGCTTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATGATAGACTTTATTATAAGCTAGAATAGTAATAAGCTTACAT  500

seq1  TCAAATGGTTTTTAATACTGATAATTCTGTCTCCCTGGTTGTAAGCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGGTTTTTAATACTGATAATTCTGTCTCCCTGGTTGTAAGCCTCA  550

seq1  ACTAATTTCTGTGTCTGTCTGTGAATAATGAATTCACACTGCAGCCTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTCTGTGTCTGTCTGTGAATAATGAATTCACACTGCAGCCTACC  600

seq1  ATTCCCTCTCCCTGAGTTGCTTTGTTCCGATCTGCCCATCAAAAGTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCTCCCTGAGTTGCTTTGTTCCGATCTGCCCATCAAAAGTTCTC  650

seq1  TCGTCTGATGGACTCAGTACAAATAACATCTTCTTTGTAATACTGGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTGATGGACTCAGTACAAATAACATCTTCTTTGTAATACTGGCCCT  700

seq1  ATTCCTATGAAATGGAAATTCTTTTCCCTTAGAATCTAAAAACACTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATGAAATGGAAATTCTTTTCCCTTAGAATCTAAAAACACTTTAA  750

seq1  TAATCTTATTAAAACCCCTCCATATACACTGTGCCTATGTTTACCTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTATTAAAACCCCTCCATATACACTGTGCCTATGTTTACCTCATT  800

seq1  ATATAGATACATTATTTTTTCTACTCATGTAATTCTAGAGGGAGAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATACATTATTTTTTCTACTCATGTAATTCTAGAGGGAGAAAATT  850

seq1  ATACTTTTGTCATATTTGTGTCTACATTGCAAGTTTTTTTTCTCACTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTGTCATATTTGTGTCTACATTGCAAGTTTTTTTTCTCACTTGA  900

seq1  AGCACCTGGTTCTAAGCATTCCTATAATAGAGCTCTTTTTTCATCCTTTA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCACCTGGTTCTAAGCATTCCTATAATAGAGCTTTTTTTTCATCCTTTA  950

seq1  CACCATCATCCCATTGCTTAATCTGTAAGAATACTG-CAGGGGAAGCAGA  999
      | ||||||||||||||||| |||||||||||||||| ||||||| || ||
seq2  CCCCATCATCCCATTGCTTTATCTGTAAGAATACTGCCAGGGGAGGCGGA  1000

seq1  TGAG-AAGAAATTAAACAACATATATTGATTTGGACCAGTGAGGTGGCTC  1048
      |||| ||||||||||   |||||||||||||||||||| ||||| |||||
seq2  TGAGAAAGAAATTAA--CACATATATTGATTTGGACCACTGAGGGGGCTC  1048

seq1  AGCAGATGAAGTTGC-TTTGCTTC-TCACAACCAAATG-ATGGAAAAAGA  1095
      |||| |||||||||| ||||| || || ||||| |||| ||||||||| |
seq2  AGCAAATGAAGTTGCTTTTGCCTCTTCCCAACCCAATGAATGGAAAAAAA  1098

seq1  GAACCAAG-ACTTGCATGTT--GTCCTATGCCCTCCACAAGAACACTGGG  1142
       ||||||| |||||||||||   || |||||||||  | |||||||||||
seq2  AAACCAAGAACTTGCATGTTTGTTCTTATGCCCTC--CCAGAACACTGGG  1146

seq1  AGATGCGTACAAATAAATACAT-GCATG  1169
      |||||||||||||||||| ||| |||||
seq2  AGATGCGTACAAATAAAT-CATGGCATG  1173

seq1: chr10_27447021_27447974
seq2: B6Ng01-049O03.g_68_1018 (reverse)

seq1  GCTGTCTCACATCCATAACTCTAGGCATAAGCTATCCACACAGATAAAGA  50
      ||||||||||||| |||||||||||||| |||||||||||||||| ||||
seq2  GCTGTCTCACATCGATAACTCTAGGCAT-AGCTATCCACACAGAT-AAGA  48

seq1  TAACAACAGCATATCAGTTGTGAGGATGGTTAGTTTAAGATCAGGACAGC  100
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  TAACAACAGCATATCAG-TGTGAGGATGGTTAG-TTAAGATCAGGACAGC  96

seq1  TGAGAAAAGATGGAG-AAAGGCTCTGTACCTTCCCCATTTGATACTGCCT  149
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAGATGAAGAAAAGGCTCTGTACCTTCCCCATTTGATACTGCCT  146

seq1  CTGCTTCTCTAATCTCTCCATCTCTGTGCCTTTCTACAATAAATGCCTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTCTAATCTCTCCATCTCTGTGCCTTTCTACAATAAATGCCTTG  196

seq1  AAACCATGGACTGTTTCTTCTCATCAGGATCTGCTGTGCTGAAGCAATGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGGACTGTTTCTTCTCATCAGGATCTGCTGTGCTGAAGCAATGG  246

seq1  AGCAGGTCTTCCTCTAAAGAGATACGCACATCTAATCTCCTGCAGGAGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCTTCCTCTAAAGAGATACGCACATCTAATCTCCTGCAGGAGAC  296

seq1  TTCTCAGAGTTCCTAGACATAGTTTCCACCAACCAAAGCCACTGCCAACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGAGTTCCTAGACATAGTTTCCACCAACCAAAGCCACTGCCAACT  346

seq1  GACCGAGCAAGTCAAGGATTTTCATCCCTATGAGAACCAGCAGGAGTACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGAGCAAGTCAAGGATTTTCATCCCTATGAGAACCAGCAGGAGTACT  396

seq1  CTCCTCCCTGCCCTTTTCCCTTCTGCCCTGTACCAGAGCCATCCCTACTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCTGCCCTTTTCCCTTCTGCCCTGTACCAGAGCCATCCCTACTG  446

seq1  GACCACACTCCATCTCAGCTTTTGTGTGACATCCAGCGGGGTCTGCAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACACTCCATCTCAGCTTTTGTGTGACATCCAGCGGGGTCTGCAGAG  496

seq1  TGAGAACCTGCAGTCCCCGACCTCCGTGCAGGACCCGGGTACCCCCAAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACCTGCAGTCCCCGACCTCCGTGCAGGACCCGGGTACCCCCAAGC  546

seq1  TCAAATCCAGTAGTTCAGTGGGGTCCTCAGGCTGTGCTTCGAAGTGGGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCAGTAGTTCAGTGGGGTCCTCAGGCTGTGCTTCGAAGTGGGGT  596

seq1  CCTGTGGCTTCTCACAGCCCAATGCCCACCCAGCACAGTGTGGGGTACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGCTTCTCACAGCCCAATGCCCACCCAGCACAGTGTGGGGTACAC  646

seq1  ACAGTTAGACTTCCAGCGTCCCACCTCACCCAGCGGCCCAAGCCCTGGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAGACTTCCAGCGTCCCACCTCACCCAGCGGCCCAAGCCCTGGGT  696

seq1  GGGACCCAATTTTAACCTATAGTATGGCTTTTACTGCAGATGGCATACAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCAATTTTAACCTATAGTATGGCTTTTACTGCAGATGGCATACAA  746

seq1  GTAGAAAATCTAAGCCACCTCTTTAACTGTGATTCATAACATAACACACG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAATCTAAGCCACCTCTTTAACTGTGATTCATAACATAACACACG  796

seq1  CTGATAAACTAGCCTTTCAATGAAAAAAGAACAAAGCAATTTTCTGGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAACTAGCCTTTCAATGAAAAAAGAACAAAGCAATTTTCTGGAAA  846

seq1  AAAAACTATTTATTTTAGCTTATGTCTTAAGTTTAAAGTTTATCCCATAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATTTATTTTAGCTTATGTCTTAAGTTTAAAGTTTATCCCATAT  896

seq1  CCCCACCTATAAAGGGTCCAAGAAATATAGAAGGACTTTATGGGAAATGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTATAAAGGGTCCAAGAAATATAGAAGGACTTTATGGGAAATGG  946

seq1  AATTC  954
      |||||
seq2  AATTC  951