BAC Information

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BAC

Clone NameB6Ng01-053H22
Chromosome10 (Build37)
Map Location 45,813,052 - 45,906,532
singlet/doubletdoublet
Overlap genenone
Upstream genePrep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364, Hace1, LOC664781
Downstream geneLOC100041632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053H22.bB6Ng01-053H22.g
ACCDH876527DH876528
length1,2131,065
definitionDH876527|Mus musculus domesticus DNA, BAC clone: B6Ng01-053H22, 5' end.DH876528|Mus musculus domesticus DNA, BAC clone: B6Ng01-053H22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,905,309 - 45,906,532)(45,813,052 - 45,814,120)
sequence
gaattcactttccattgctagtttaaaaaaaaaatgcctgtgatttctcc
attttctagatgctttcttgaaagtattccctccctaaggactatcgttc
tattgtgtgtcattgagctccttccacggagtgttgctgaaacctctgct
aatcttctagtgcattctcgtctcactgtaaaacaaaaagatataatctt
tgatatataataacaataatctgaagtgaaaggatctaaattattaaatc
atatgaaaataagagaatgagtttctaacttaacactttaatagacacat
ccattttatttagctctaacacatttaaatccagcttattgctaacatag
gtttaagtaaaacacatgtaaagcattattggttttcagaaatgacaagc
atttcttaccagtgagatcccagcttgtgacctgcccctccttctctgtg
tgtctagaggcttgccacatgccaggaattttgcaagcaagtaccacact
tgctaaaaataattgctcttttctatgtctgttcaggcatgatgctctga
actaaagtacaaagcacagcaacttcaattaacaactacaacttcaatat
tattcaattcaatgtagattcatttttaccctaaggatattacaacacat
cacagaattgaacattattcccgaaacatctgtcatcaaaactagaatca
tacacttagatccacataaatcacagcaaactgccatcccgcagcaagag
tcaaacacccaccctatgccatggcctttaaaatatagagataattgatg
gatggtcttctttgcttgtctcgtcaccaaggttttgcttcagaaaaata
ccccatgatgagtccactgtttttgatgctatttgcaagtagtgtttcat
aatttaggatgcagcatgctggtctaaatcgacatgttttgtaagggatc
ccatcatgtcaacagaggagaggaaaatctgacagcaggcatttgtcgga
tacagccaatcttctgctggagctacttccactgcatggtcctggagcat
agaaacttattgcagtttttataatttcatgctacatgaaactgaaggaa
gatttgaattagggatggaggatcgttaaatgtgtatcatttactgcaaa
tgtagaatgggagggcctacctacagagaaaacactgttcccacaaaagg
tggatcacaaact
gaattcaagactgatctgggctacatggtgagtccctctctaagaaggaa
aagcttaatgaacaaacaaaacacaacacaacaaatgcacagatttctat
atatctgtgcgcagctttccatcctcaccagggtgctaggattcatggag
aatggtctttattagtgtagtagtgttcaacagtatcatttctgtcacca
atcacactcctttacatcatgcagtctgcatccgaactttccatttgatt
ttcctgggtcaaattttgttttgtaatcgcctcctctagcatgctgttga
tggaatcattctctataagtgttggcatcgactggaacaagaatctcatt
ttgtacttacttcttgatgagtgtcttggcagttcttgagctgttgctat
tctgttaaaaattttaaaatcagtttttaaaaatcacttgaaacagggtt
ggaaattaattcaaattatgctcagttccaaaataattttggagaaaatg
gatgcttataaaatgttgcatttaataagaaaaaaaaataccatgcagga
aatattagaagacttgttgcaaggaataggcttacaggaaagggaaaggc
aggtggaactctgctagatctatacttgggatttcttcctcagaggtctc
ttctctgttaggcatttgactggtttattgaggcctagtcagaatataga
gaatagctttctttcattttaaggtctatgtactatatatctcataaaat
acttttcacgcaaatacttaatttaggatcaggatacagcatagtatttg
aaactgggccaatctgatacacaaaactcacttcactttcacacagctca
cacacatggtagttttctctctttatatgtattttttgttcacaagttga
ctttttgtcaccctgcactagttttgaatcaggctacacattcatgggga
gaatggacctgggatgaggaatcccttctcagattgaccctgcgggttgc
tggtgagtattcttcaattgctggagagtacagacccagttccatccctg
gaaagtggtgtcgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45905309_45906532
seq2: B6Ng01-053H22.b_45_1257 (reverse)

seq1  AGTTT-TGAT-CACCTTTTGTGGGAACAGTGTTTTCTTGGTAGGTAGGCC  48
      ||||| |||| ||||||||||||||||||||||||||  |||||||||||
seq2  AGTTTGTGATCCACCTTTTGTGGGAACAGTGTTTTCTCTGTAGGTAGGCC  50

seq1  TTCCATTTCTCATTTTTGCAGTGAAATGATACACATTTTTACGAAATCAT  98
       |||  |||| |  |||||||| |||||||||||| ||| |||  ||| |
seq2  CTCCCATTCT-ACATTTGCAGT-AAATGATACACA-TTTAACG--ATCCT  95

seq1  CAATTCCTAATTCAAATTCTTCCTTCAGTTTCATGTATGCATGAATTTAT  148
      | || ||||||||||| |||||||||||||||||||| ||||||| ||||
seq2  CCATCCCTAATTCAAA-TCTTCCTTCAGTTTCATGTA-GCATGAAATTAT  143

seq1  -AAAACTGCAATAAGTTTTCTATGCTTCAGGGACCATGCAGTGGAAGTAG  197
       |||||||||||||| |||||||||| || ||||||||||||||||||||
seq2  AAAAACTGCAATAAG-TTTCTATGCTCCA-GGACCATGCAGTGGAAGTAG  191

seq1  CTTCCAGCAGAGATTTGGCTGTATCCGACAAATGCCTGCTGTCAGATTTT  247
      | |||||||||   ||||||||||||||||||||||||||||||||||||
seq2  C-TCCAGCAGAAGATTGGCTGTATCCGACAAATGCCTGCTGTCAGATTTT  240

seq1  TCCTTCTCCTCTGTTTGACATGATGGGATCCCTTAC-AAACATGTCGATT  296
        | ||||||||| |||||||||||||||||||||| |||||||||||||
seq2  --CCTCTCCTCTG-TTGACATGATGGGATCCCTTACAAAACATGTCGATT  287

seq1  TAGACCAGCATGCTGCATCCTAAATTATGAAAACACTACTTGCATATTAG  346
      ||||||||||||||||||||||||||||| |||||||||||||| | |||
seq2  TAGACCAGCATGCTGCATCCTAAATTATG-AAACACTACTTGCA-AATAG  335

seq1  CATCAAAAACAGTGGACTCATCATGGGGTATTTTTCTGAAGCAAAACCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAAACAGTGGACTCATCATGGGGTATTTTTCTGAAGCAAAACCTT  385

seq1  GGTGACGAGACAAGCAAAGAAGACCATCCATCAATTATCTCTATATTTTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACGAGACAAGCAAAGAAGACCATCCATCAATTATCTCTATATTTTA  435

seq1  AAGGCCATGGCATAGGGTGGGTGTTTGACTCTTGCTGCGGGATGGCAGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATGGCATAGGGTGGGTGTTTGACTCTTGCTGCGGGATGGCAGTT  485

seq1  TGCTGTGATTTATGTGGATCTAAGTGTATGATTCTAGTTTTGATGACAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGATTTATGTGGATCTAAGTGTATGATTCTAGTTTTGATGACAGA  535

seq1  TGTTTCGGGAATAATGTTCAATTCTGTGATGTGTTGTAATATCCTTAGGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCGGGAATAATGTTCAATTCTGTGATGTGTTGTAATATCCTTAGGG  585

seq1  TAAAAATGAATCTACATTGAATTGAATAATATTGAAGTTGTAGTTGTTAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGAATCTACATTGAATTGAATAATATTGAAGTTGTAGTTGTTAA  635

seq1  TTGAAGTTGCTGTGCTTTGTACTTTAGTTCAGAGCATCATGCCTGAACAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTGCTGTGCTTTGTACTTTAGTTCAGAGCATCATGCCTGAACAG  685

seq1  ACATAGAAAAGAGCAATTATTTTTAGCAAGTGTGGTACTTGCTTGCAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAAAAGAGCAATTATTTTTAGCAAGTGTGGTACTTGCTTGCAAAA  735

seq1  TTCCTGGCATGTGGCAAGCCTCTAGACACACAGAGAAGGAGGGGCAGGTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCATGTGGCAAGCCTCTAGACACACAGAGAAGGAGGGGCAGGTC  785

seq1  ACAAGCTGGGATCTCACTGGTAAGAAATGCTTGTCATTTCTGAAAACCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGGGATCTCACTGGTAAGAAATGCTTGTCATTTCTGAAAACCAA  835

seq1  TAATGCTTTACATGTGTTTTACTTAAACCTATGTTAGCAATAAGCTGGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTTTACATGTGTTTTACTTAAACCTATGTTAGCAATAAGCTGGAT  885

seq1  TTAAATGTGTTAGAGCTAAATAAAATGGATGTGTCTATTAAAGTGTTAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTGTTAGAGCTAAATAAAATGGATGTGTCTATTAAAGTGTTAAG  935

seq1  TTAGAAACTCATTCTCTTATTTTCATATGATTTAATAATTTAGATCCTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAACTCATTCTCTTATTTTCATATGATTTAATAATTTAGATCCTTT  985

seq1  CACTTCAGATTATTGTTATTATATATCAAAGATTATATCTTTTTGTTTTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGATTATTGTTATTATATATCAAAGATTATATCTTTTTGTTTTA  1035

seq1  CAGTGAGACGAGAATGCACTAGAAGATTAGCAGAGGTTTCAGCAACACTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGACGAGAATGCACTAGAAGATTAGCAGAGGTTTCAGCAACACTC  1085

seq1  CGTGGAAGGAGCTCAATGACACACAATAGAACGATAGTCCTTAGGGAGGG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGAAGGAGCTCAATGACACACAATAGAACGATAGTCCTTAGGGAGGG  1135

seq1  AATACTTTCAAGAAAGCATCTAGAAAATGGAGAAATCACAGGCATTTTTT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTCAAGAAAGCATCTAGAAAATGGAGAAATCACAGGCATTTTTT  1185

seq1  TTTTAAACTAGCAATGGAAAGTGAATTC  1224
      ||||||||||||||||||||||||||||
seq2  TTTTAAACTAGCAATGGAAAGTGAATTC  1213

seq1: chr10_45813052_45814120
seq2: B6Ng01-053H22.g_70_1134

seq1  GAATTCAAGACTGATCTGGGCTACATGGTGAGTCCCTCTCTAAGAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACTGATCTGGGCTACATGGTGAGTCCCTCTCTAAGAAGGAA  50

seq1  AAGCTTAATGAACAAACAAAACACAACACAACAAATGCACAGATTTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAATGAACAAACAAAACACAACACAACAAATGCACAGATTTCTAT  100

seq1  ATATCTGTGCGCAGCTTTCCATCCTCACCAGGGTGCTAGGATTCATGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTGCGCAGCTTTCCATCCTCACCAGGGTGCTAGGATTCATGGAG  150

seq1  AATGGTCTTTATTAGTGTAGTAGTGTTCAACAGTATCATTTCTGTCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTTTATTAGTGTAGTAGTGTTCAACAGTATCATTTCTGTCACCA  200

seq1  ATCACACTCCTTTACATCATGCAGTCTGCATCCGAACTTTCCATTTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACTCCTTTACATCATGCAGTCTGCATCCGAACTTTCCATTTGATT  250

seq1  TTCCTGGGTCAAATTTTGTTTTGTAATCGCCTCCTCTAGCATGCTGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGGTCAAATTTTGTTTTGTAATCGCCTCCTCTAGCATGCTGTTGA  300

seq1  TGGAATCATTCTCTATAAGTGTTGGCATCGACTGGAACAAGAATCTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCATTCTCTATAAGTGTTGGCATCGACTGGAACAAGAATCTCATT  350

seq1  TTGTACTTACTTCTTGATGAGTGTCTTGGCAGTTCTTGAGCTGTTGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTTACTTCTTGATGAGTGTCTTGGCAGTTCTTGAGCTGTTGCTAT  400

seq1  TCTGTTAAAAATTTTAAAATCAGTTTTTAAAAATCACTTGAAACAGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTAAAAATTTTAAAATCAGTTTTTAAAAATCACTTGAAACAGGGTT  450

seq1  GGAAATTAATTCAAATTATGCTCAGTTCCAAAATAATTTTGGAGAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTAATTCAAATTATGCTCAGTTCCAAAATAATTTTGGAGAAAATG  500

seq1  GATGCTTATAAAATGTTGCATTTAATAAGAAAAAAAAATACCATGCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTATAAAATGTTGCATTTAATAAGAAAAAAAAATACCATGCAGGA  550

seq1  AATATTAGAAGACTTGTTGCAAGGAATAGGCTTACAGGAAAGGGAAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGAAGACTTGTTGCAAGGAATAGGCTTACAGGAAAGGGAAAGGC  600

seq1  AGGTGGAACTCTGCTAGATCTATACTTGGGATTTCTTCCTCAGAGGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAACTCTGCTAGATCTATACTTGGGATTTCTTCCTCAGAGGTCTC  650

seq1  TTCTCTGTTAGGCATTTGACTGGTTTATTGAGGCCTAGTCAGAATATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTTAGGCATTTGACTGGTTTATTGAGGCCTAGTCAGAATATAGA  700

seq1  GAATAGC-TTCCTTCA-TTTAAGGTCTATGTACTATATATCTCATAAAAT  748
      ||||||| ||| |||| |||||||||||||||||||||||||||||||||
seq2  GAATAGCTTTCTTTCATTTTAAGGTCTATGTACTATATATCTCATAAAAT  750

seq1  AC-TTTCACGCAAATACTTAATTTAGGATCAGGATACAGCATAGTATTTG  797
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCACGCAAATACTTAATTTAGGATCAGGATACAGCATAGTATTTG  800

seq1  AAACT-GGCCAATCTGATACACAAAACTCACCTCACTTTCACACAGCTCA  846
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAACTGGGCCAATCTGATACACAAAACTCACTTCACTTTCACACAGCTCA  850

seq1  CACACATGGTAGTTTTCTCTCTTTATATGTATTTTTATGTTCACAAGTTG  896
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CACACATGGTAGTTTTCTCTCTTTATATGTATTTTT-TGTTCACAAGTTG  899

seq1  AC-TTTTGTCACCCTGCACTAGTTTTGATACAGGCTACACATTCATGGGG  945
      || |||||||||||||||||||||||||  ||||||||||||||||||||
seq2  ACTTTTTGTCACCCTGCACTAGTTTTGAATCAGGCTACACATTCATGGGG  949

seq1  AGAAGGAACCTGGGATGAGGGAATCCCTTCATCAGATTGA-CCTGCGGGT  994
      |||| | ||||||||||| ||||||||||| ||||||||| |||||||||
seq2  AGAATGGACCTGGGATGA-GGAATCCCTTC-TCAGATTGACCCTGCGGGT  997

seq1  ATGTCTGTGAGGTATTTTCTCAATTGCTGGTAGATGTACAAGACCCAGTT  1044
       ||   |||| ||||| | ||||||||||| ||| |||| ||||||||||
seq2  -TGCTGGTGA-GTATTCT-TCAATTGCTGG-AGA-GTAC-AGACCCAGTT  1041

seq1  CCATCCCTGGAGAGGTGGTGTCGGA  1069
      ||||||||||| | ||||||||| |
seq2  CCATCCCTGGA-AAGTGGTGTCGAA  1065