BAC Information

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BAC

Clone NameB6Ng01-054G12
Chromosome10 (Build37)
Map Location 45,121,422 - 45,270,661
singlet/doubletdoublet
Overlap geneLin28b, Dbil5-ps
Upstream geneLOC100041506, Prdm1, LOC546476, 4930431F10Rik, LOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves
Downstream geneLOC100042364, Hace1, LOC664781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054G12.bB6Ng01-054G12.g
ACCDH877157DH877158
length1,131998
definitionDH877157|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G12, 5' end.DH877158|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,121,422 - 45,122,570)(45,270,071 - 45,270,661)
sequence
gaattctttgtttatctctgtaccccattttttaatggggttatttgaat
ttctggagtccagcttcttgagattcttacctgttcctttttctcagtcc
cctaccagatttaggattggtaaaaatcctttcccaacctcttaacagac
actcttaactcaaaggaaggcagagaaaacagcaatcacagttgaaagtt
aacattcccttttccataagcaataaaagaggagacattacacagtaaga
tgaaaatttggactgcactaacaaacaatactatataactaacacaataa
aataacgcactcaatattttctaaatacacagagcactgcccagggcaga
ccacatctagaaaagcaactaatgtcaacaattttaccaagttgaaatct
tgccagaacatgttttctgactccaataaggctaattcagaaataagcaa
tacatacaggtttcaatgtatttgagcaccacacactctaacacatataa
aaaaatcataagagatattaaaataaaaaactctaaaatgttaaattttg
tggcatgtgcctgagacgttaagagctttaggcgtttctatctctgaaaa
gttcaaaaccttaaaaatcagtgtttatttagagaagttcgaaagaaaat
agcaaaagaatctcaaattaagtaaaacaaataagaacagaaacaactga
tgtggaaaaactagaaaattaaaggtacccctgaaaggcacatttcctgt
ggaaatgaactagaaatacaaacgagaaaaagaaaaaaaaaattaccagt
atcagacatgaaaactggaccactgctctaccttaccgacattaacaaga
taaaaagggctgcgtgacagctcagcagttgaatgtttgccaatcacaag
gcccaaagttcaagccccagaagattgtaaaagaatgtgattgttaattc
agcttgttactccaagggtccgatcatccacagacaatcctataagaatt
aactaaaactgatatttacagtatgtatgatttcactcctctccccctta
cactctgatctattgctagtctgaacttaatatttaatactgtgaagtgg
atgacactgctgggatgtgtgtggaggcaaa
gaattccacttttataatcacttgctatgtacctcaagcttgaaacttga
ctataaaagggctcgtgagcttttagtctctgctgcttctctctcctact
tcagaggagactgcaaatttgatccagccatgaaataaaattttaccttg
caacagaacagtggttacttctggctttcaacaccacaacagatgacccc
acccacaatgagctggccctcccatatcagtcactaattaagaaaatgca
ctcaggcttggttgctgtccaatgttatagatacattttctcaattgaag
ttccttcctctcagatgactttagtttgtatcaagttgatataaaattag
ccagcacatagaacaaatattaatcagcacccctccacagtctctgattc
agttcctgcctttgctgcctttgatgatggatatgatggattacgagcag
aacacataagccaaacctatcttttcctcctcaagttgtttttggttagt
gttcattagaaatcaaactaaaccaggtttgttttcttgtttgtttgttt
ttaaaaaattaatttaaagtgatatgcacctttaatcccagcactttgga
ggtagaggcagatggatctctatgagttcaaggcccgtctggtctacaga
gaaagttccaggagagctaagactacacagaaaaaccttgtttcaaaaag
caaacaaaaaacttaaattttatgtttatggtattttgcttgcatgtgtg
tttgtgtgccacggtgtatgcctggtaccagtagaggtcagaatatgctg
ttaggtcccctggaactggatttacaaattattgtgatccaccatgtggt
ttctcagaaccaaacccaggtcctctgtaagagcagcaagtgttttaact
gttgacccatctcccctaccatcaccccagttgtcttgtttgctatgatt
tgtttcagaccaggtctcactgtgtagtcctggctctctagaactgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45121422_45122570
seq2: B6Ng01-054G12.b_48_1178

seq1  GAATTCTTTGTTTATCTCTGTACCCCATTTTTTAATGGGGTTATTTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTATCTCTGTACCCCATTTTTTAATGGGGTTATTTGAAT  50

seq1  TTCTGGAGTCCAGCTTCTTGAGATTCTTACCTGTTCCTTTTTCTCAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCAGCTTCTTGAGATTCTTACCTGTTCCTTTTTCTCAGTCC  100

seq1  CCTACCAGATTTAGGATTGGTAAAAATCCTTTCCCAACCTCTTAACAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCAGATTTAGGATTGGTAAAAATCCTTTCCCAACCTCTTAACAGAC  150

seq1  ACTCTTAACTCAAAGGAAGGCAGAGAAAACAGCAATCACAGTTGAAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAACTCAAAGGAAGGCAGAGAAAACAGCAATCACAGTTGAAAGTT  200

seq1  AACATTCCCTTTTCCATAAGCAATAAAAGAGGAGACATTACACAGTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCCCTTTTCCATAAGCAATAAAAGAGGAGACATTACACAGTAAGA  250

seq1  TGAAAATTTGGACTGCACTAACAAACAATACTATATAACTAACACAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTTGGACTGCACTAACAAACAATACTATATAACTAACACAATAA  300

seq1  AATAACGCACTCAATATTTTCTAAATACACAGAGCACTGCCCAGGGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACGCACTCAATATTTTCTAAATACACAGAGCACTGCCCAGGGCAGA  350

seq1  CCACATCTAGAAAAGCAACTAATGTCAACAATTTTACCAAGTTGAAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTAGAAAAGCAACTAATGTCAACAATTTTACCAAGTTGAAATCT  400

seq1  TGCCAGAACATGTTTTCTGACTCCAATAAGGCTAATTCAGAAATAAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAACATGTTTTCTGACTCCAATAAGGCTAATTCAGAAATAAGCAA  450

seq1  TACATACAGGTTTCAATGTATTTGAGCACCACACACTCTAACACATATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAGGTTTCAATGTATTTGAGCACCACACACTCTAACACATATAA  500

seq1  AAAAATCATAAGAGATATTAAAATAAAAAACTCTAAAATGTTAAATTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCATAAGAGATATTAAAATAAAAAACTCTAAAATGTTAAATTTTG  550

seq1  TGGCATGTGCCTGAGACGTTAAGAGCTTTAGGCGTTTCTATCTCTGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGTGCCTGAGACGTTAAGAGCTTTAGGCGTTTCTATCTCTGAAAA  600

seq1  GTTCAAAACCTTAAAAATCAGTGTTTATTTAGAGAAGTTCGAAAGAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAACCTTAAAAATCAGTGTTTATTTAGAGAAGTTCGAAAGAAAAT  650

seq1  AGCAAAAGAATCTCAAATTAAGTAAAACAAATAAGAACAGAAACAACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGAATCTCAAATTAAGTAAAACAAATAAGAACAGAAACAACTGA  700

seq1  TGTGGAAAAACTAGAAAATTAAAGGTACCCCTGAAAGGCACATTTCCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAAACTAGAAAATTAAAGGTACCCCTGAAAGGCACATTTCCTGT  750

seq1  GGAAATGAACTAGAAATACAAACGAGAAAAAGAAAAAAAAAATTACCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAACTAGAAATACAAACGAGAAAAAGAAAAAAAAAATTACCAGT  800

seq1  ATCAGACATGAAAACTGGACCACTGCTCTACCTTACCGACATTAACAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACATGAAAACTGGACCACTGCTCTACCTTACCGACATTAACAAGA  850

seq1  TAAAAAGGGCTGCGTGACAGCTCAGCAGTTGAATGTTTGCCAATCACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGGGCTGCGTGACAGCTCAGCAGTTGAATGTTTGCCAATCACAAG  900

seq1  GCCCAAAGTTCAAGCCCCAGAAGATTGTAAAAGAATGTGATTGTTAATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAGTTCAAGCCCCAGAAGATTGTAAAAGAATGTGATTGTTAATTC  950

seq1  AGCTTGTTAACTCCAAGGGGTCCGGAATCATCCACAAGACAATCCTATTA  1000
      |||||||| ||||||| |||||||  ||||||||| ||||||||||| ||
seq2  AGCTTGTT-ACTCCAA-GGGTCCG--ATCATCCAC-AGACAATCCTA-TA  994

seq1  AGAATTAACTAAAACTGATATTTACAGGTATGTATGATTTCACTCCTCTC  1050
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAATTAACTAAAACTGATATTTACA-GTATGTATGATTTCACTCCTCTC  1043

seq1  CCCCTTACCACTCTGGATCTATTTGCTAGTTCTTGAACTTATATTTTAAT  1100
      ||||||| |||||| |||||| ||||||||   ||||||||   ||||||
seq2  CCCCTTA-CACTCT-GATCTA-TTGCTAGT--CTGAACTTAATATTTAAT  1088

seq1  ACTGTGAAGTTGGGATGGACACGTGCTGGGATGTGTGTGGGAGGGCAAA  1149
      ||||||||||  |||| ||||| |||||||||||||||||   ||||||
seq2  ACTGTGAAGT--GGAT-GACAC-TGCTGGGATGTGTGTGG--AGGCAAA  1131

seq1: chr10_45270071_45270661
seq2: B6Ng01-054G12.g_68_658 (reverse)

seq1  CTGGGATTAAAGGTGCATATCACTTTAAATTAATTTTTTAAAAACAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGTGCATATCACTTTAAATTAATTTTTTAAAAACAAACA  50

seq1  AACAAGAAAACAAACCTGGTTTAGTTTGATTTCTAATGAACACTAACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAAACAAACCTGGTTTAGTTTGATTTCTAATGAACACTAACCAA  100

seq1  AAACAACTTGAGGAGGAAAAGATAGGTTTGGCTTATGTGTTCTGCTCGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTTGAGGAGGAAAAGATAGGTTTGGCTTATGTGTTCTGCTCGTA  150

seq1  ATCCATCATATCCATCATCAAAGGCAGCAAAGGCAGGAACTGAATCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCATATCCATCATCAAAGGCAGCAAAGGCAGGAACTGAATCAGAG  200

seq1  ACTGTGGAGGGGTGCTGATTAATATTTGTTCTATGTGCTGGCTAATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAGGGGTGCTGATTAATATTTGTTCTATGTGCTGGCTAATTTTA  250

seq1  TATCAACTTGATACAAACTAAAGTCATCTGAGAGGAAGGAACTTCAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACTTGATACAAACTAAAGTCATCTGAGAGGAAGGAACTTCAATTG  300

seq1  AGAAAATGTATCTATAACATTGGACAGCAACCAAGCCTGAGTGCATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTATCTATAACATTGGACAGCAACCAAGCCTGAGTGCATTTTC  350

seq1  TTAATTAGTGACTGATATGGGAGGGCCAGCTCATTGTGGGTGGGGTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGTGACTGATATGGGAGGGCCAGCTCATTGTGGGTGGGGTCATC  400

seq1  TGTTGTGGTGTTGAAAGCCAGAAGTAACCACTGTTCTGTTGCAAGGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGTGTTGAAAGCCAGAAGTAACCACTGTTCTGTTGCAAGGTAAA  450

seq1  ATTTTATTTCATGGCTGGATCAAATTTGCAGTCTCCTCTGAAGTAGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTCATGGCTGGATCAAATTTGCAGTCTCCTCTGAAGTAGGAGA  500

seq1  GAGAAGCAGCAGAGACTAAAAGCTCACGAGCCCTTTTATAGTCAAGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAGCAGAGACTAAAAGCTCACGAGCCCTTTTATAGTCAAGTTTC  550

seq1  AAGCTTGAGGTACATAGCAAGTGATTATAAAAGTGGAATTC  591
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGAGGTACATAGCAAGTGATTATAAAAGTGGAATTC  591