BAC Information

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BAC

Clone NameB6Ng01-055K09
Chromosome10 (Build37)7 (Build37)
Map Location 104,053,911 - 104,054,33754,998,612 - 54,998,816
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055K09.bB6Ng01-055K09.g
ACCDH878035DH878036
length989205
definitionDH878035|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K09, 5' end.DH878036|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,911 - 104,054,337)(54,998,612 - 54,998,816)
sequence
gaattctcatctgaggcataccaaaaggcagagaagcacctgaaaaaaaa
aatgttcagcatccttaattatcagggaaatgcaattcaaaacaaccctg
agattccacctcacaccattcagagtggctaagatgaaaaattcaggtga
cttcagatgctggtgaggatgtggagaaacaggaacactcctccattgtt
ggtggaattgcaagcttatacaaccactctggaaatcagtctggtggttc
ctcagaaaattagacatagtactacaggaggatcccacaatacctctgct
ggggatatatccagaagatgttccaactggtaagtcggacacatgctcta
ctatgttcacagcagccttatttataatagccagaagctggaaagaaccc
agatgtccctcaacagaggaatggatacagaaaatgtggtacatttacac
aatggagtactactcagctatttaaagaatgaatttatgaaattcttagg
caaatgtatcgacctggagggcatcatcctgagtgaggtaacccaatcac
aatagaactcacattgctgcagaccctctgggtccctttgtctacatgga
acatgtctctggggcaggtaggcaaagagtcgttgggtgacagacagacc
aacacacgagattgtgtagaatctgaatgcattgtcacaaagtgaacacc
tatcttatatagtacagaaaatacaaagggtcagaagtcactgcagacaa
ggtacattgaagttacgtgatacaaaacaaaggaatgactacaaagggac
tacaggaaccaggtaaatgtttacagtaaagataaagcagtcttgcctag
ggtcagcttagtgacaggtaaggatttcacactctagtgctatacctttg
aacttgtgaaggctagcaccatggggtactgctcttggtagtcctcatga
atatgcaatatacaacctcccccatttcctaggcttgct
taaaatgcagaaacacatgttctttcagccatgcatttaataaaaaggaa
gaaagatagtgccaaataccagagcccagcaggaaaggatttcacaagtg
gaatagataaacagttggaagctagtaagagtaatgtattaagtaaacca
gaaagcttaaaagactagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
agaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053911_104054337
seq2: B6Ng01-055K09.b_73_503 (reverse)

seq1  CTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGG  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGG  50

seq1  GGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATG  100
      | |||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  GACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTGTG  100

seq1  AATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATA  150
      || ||||| ||||||||||||  |||||| |||||  |||||||||||||
seq2  AACATAGTAGAGCATGTGTCCGACTTACCAGTTGGAACATCTTCTGGATA  150

seq1  TATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATT  200
      ||| ||||| ||||||||||  ||||||||| ||||||||||||| ||||
seq2  TATCCCCAGCAGAGGTATTGTGGGATCCTCCTGTAGTACTATGTCTAATT  200

seq1  TTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAA  250
      |||||| ||||| |||||| ||||||||||||||||||| |||| |||||
seq2  TTCTGAGGAACCACCAGACTGATTTCCAGAGTGGTTGTATAAGCTTGCAA  250

seq1  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  300
      | ||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TTCCACCAACAATGGAGGAGTGTTCCTGTTTCTCCACATCCTCACCAGCA  300

seq1  TCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGT  350
      ||||  ||||||||||||||| |||||||||| ||||| |||||||||||
seq2  TCTGAAGTCACCTGAATTTTTCATCTTAGCCACTCTGAATGGTGTGAGGT  350

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  400
      ||||||||||||||||||||| ||||||||||||||| |||||||||| |
seq2  GGAATCTCAGGGTTGTTTTGAATTGCATTTCCCTGATAATTAAGGATGCT  400

seq1  GAACA----TTTTTTCAGGTGCTTCTCTGCC  427
      |||||    ||||||||||||||||||||||
seq2  GAACATTTTTTTTTTCAGGTGCTTCTCTGCC  431

seq1: chr7_54998612_54998816
seq2: B6Ng01-055K09.g_73_277

seq1  TAAAATGCAGAAACACATGTTCTTTCAGCCATGCATTTAATAAAAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCAGAAACACATGTTCTTTCAGCCATGCATTTAATAAAAAGGAA  50

seq1  GAAAGATAGTGCCAAATACCAGAGCCCAGCAGGAAAGGATTTCACAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAGTGCCAAATACCAGAGCCCAGCAGGAAAGGATTTCACAAGTG  100

seq1  GAATAGATAAACAGTTGGAAGCTAGTAAGAGTAATGTATTAAGTAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGATAAACAGTTGGAAGCTAGTAAGAGTAATGTATTAAGTAAACCA  150

seq1  GAAAGCTTAAAAGACTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTTAAAAGACTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  200

seq1  AGAGA  205
      |||||
seq2  AGAGA  205