BAC Information

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BAC

Clone NameB6Ng01-057C11
Chromosome10 (Build37)
Map Location 22,591,391 - 22,698,317
singlet/doubletdoublet
Overlap genenone
Upstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
Downstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057C11.bB6Ng01-057C11.g
ACCDH879108DH879109
length614993
definitionDH879108|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C11, 5' end.DH879109|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,591,391 - 22,592,004)(22,697,331 - 22,698,317)
sequence
gaattcataccataaaatgtaatgcatttcaagattcttttttgaaacag
atgaaggtaaaattcttttggcttgtcagtttgctatagatgtcagcatg
acagaggtttaaagtcaaggtaatagtggcttgcatctaactgctctctg
ctctgtgcagtcaagagggcagtggctcctgaacaatttccaccatttat
ttttatttctgttgtgatctatttgcatgtttttaaaggatgaagataga
aatgtgtatcgattttgctgtttcagcatgactctaatgcaaaagttgat
cagatgcagaaaatttaaattgctgtgttccatgacttggaaaagcatgt
ttaataatcgatgaatttgcatttattcacatcagttcttccagctactg
ttaataatggaaaaattattttaattttaggaatctttgtattttaatgt
tagaatagtttcgttggtgtgaggtatgtataatgtaattgtaatgtaat
aatatgctttctttctaagtcactaaaaaggtctatttatttaaaatcac
agatgttttaggtatctaaaatactgtgtgtgtgtgtgtgtttgtgagta
tgtgtgtgagtgtg
gaattctttggcaaagcagcataaaaatctgagtagttcatttgctagac
gcaatccaaagtactccaacaaaatcatcttttccatgaacctttaatct
ccaactccatggagatgtatccatttgtgttctgtggagctgagggaccc
tataacaggaaaagcaaaggtgcatgggttttgtgtacatttgtgccctg
ttctgaacgttaactattgaccaacagaacctcaaagagaagctcatttg
catccattgtgagtttggaaacatcttgaaagaagctgcagggcttaatg
actttagaacaccattgaggacttacccttttgtagttttctacaaaatg
aatgctagtattgttactctttgagcctagaacaaataatcataatattt
ctaagtttgactatatttgttagtgtactattgctgtaaaaacaaacaaa
aaaaaacacatggtgaccaagaaaacttatctaaggaaggtgtggtagtt
tgaatatgtatggtccagggaatggcactatttggaggtgttgccttgtg
ggaggaatggtgtcaccgtgggggtggacaatgagaatctcttcctagtc
ccgtggaatccagtcttctagcatcctccggacaaagatatagaactcta
acctcttcctgcaccatgcctgcctggatactgctatgctcccaccttga
tgataatgaactgaacctctgaacctataagttaaccctaactaaatgtc
gacctctataaaagttaccttggtcatggtgtctgtgcacagtaaattcc
taagacagagggtttacttgaccttaacagttctgaggtataagagacca
tcaccaccaggatagaaagtggagctctgggagagctactgagagcacac
tcttaaactgcagatgagtagaagagccatcttaaaatggcacagtcttc
aagccaccaaacccagtccagtgactttttctacgcagccacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_22591391_22592004
seq2: B6Ng01-057C11.b_43_656

seq1  GAATTCATACCATAAAATGTAATGCATTTCAAGATTCTTTTTTGAAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACCATAAAATGTAATGCATTTCAAGATTCTTTTTTGAAACAG  50

seq1  ATGAAGGTAAAATTCTTTTGGCTTGTCAGTTTGCTATAGATGTCAGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGTAAAATTCTTTTGGCTTGTCAGTTTGCTATAGATGTCAGCATG  100

seq1  ACAGAGGTTTAAAGTCAAGGTAATAGTGGCTTGCATCTAACTGCTCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTTTAAAGTCAAGGTAATAGTGGCTTGCATCTAACTGCTCTCTG  150

seq1  CTCTGTGCAGTCAAGAGGGCAGTGGCTCCTGAACAATTTCCACCATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCAGTCAAGAGGGCAGTGGCTCCTGAACAATTTCCACCATTTAT  200

seq1  TTTTATTTCTGTTGTGATCTATTTGCATGTTTTTAAAGGATGAAGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCTGTTGTGATCTATTTGCATGTTTTTAAAGGATGAAGATAGA  250

seq1  AATGTGTATCGATTTTGCTGTTTCAGCATGACTCTAATGCAAAAGTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTATCGATTTTGCTGTTTCAGCATGACTCTAATGCAAAAGTTGAT  300

seq1  CAGATGCAGAAAATTTAAATTGCTGTGTTCCATGACTTGGAAAAGCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCAGAAAATTTAAATTGCTGTGTTCCATGACTTGGAAAAGCATGT  350

seq1  TTAATAATCGATGAATTTGCATTTATTCACATCAGTTCTTCCAGCTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATCGATGAATTTGCATTTATTCACATCAGTTCTTCCAGCTACTG  400

seq1  TTAATAATGGAAAAATTATTTTAATTTTAGGAATCTTTGTATTTTAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATGGAAAAATTATTTTAATTTTAGGAATCTTTGTATTTTAATGT  450

seq1  TAGAATAGTTTCGTTGGTGTGAGGTATGTATAATGTAATTGTAATGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGTTTCGTTGGTGTGAGGTATGTATAATGTAATTGTAATGTAAT  500

seq1  AATATGCTTTCTTTCTAAGTCACTAAAAAGGTCTATTTATTTAAAATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTTTCTTTCTAAGTCACTAAAAAGGTCTATTTATTTAAAATCAC  550

seq1  AGATGTTTTAGGTATCTAAAATACTGTGTGTGTGTGTGTGTTTGTGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTTAGGTATCTAAAATACTGTGTGTGTGTGTGTGTTTGTGAGTA  600

seq1  TGTGTGTGAGTGTG  614
      ||||||||||||||
seq2  TGTGTGTGAGTGTG  614

seq1: chr10_22697331_22698317
seq2: B6Ng01-057C11.g_71_1048 (reverse)

seq1  AATGTCACTGGGACTGGGTTTTGGTGGCTTGAAGACTTGTGCCATTTTGA  50
      || |||||| |||||||| ||||||||||||||||| ||||||||||| |
seq2  AAAGTCACT-GGACTGGG-TTTGGTGGCTTGAAGAC-TGTGCCATTTTAA  47

seq1  GATGGCCTCTTTCTACTTCATCTTGCAGTTTAAGATGTGTGCTCTCAGTA  100
      ||||| ||| |||||| ||||| |||||||||||| ||||||||||||||
seq2  GATGG-CTC-TTCTAC-TCATC-TGCAGTTTAAGA-GTGTGCTCTCAGTA  92

seq1  GCTCTTCCAGAGGCTCCACTTTCTATCCTGGTGGTGATGGTCTCTTATAC  150
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCCAGA-GCTCCACTTTCTATCCTGGTGGTGATGGTCTCTTATAC  141

seq1  CTCAGAACTGTTAAGGTCAAGTAAACCCTCTGTCTTAGGAATTTACTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAACTGTTAAGGTCAAGTAAACCCTCTGTCTTAGGAATTTACTGTG  191

seq1  CACAGACACCATGACCAAGGTAACTTTTATAGAGGTCGACATTTAGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACACCATGACCAAGGTAACTTTTATAGAGGTCGACATTTAGTTAG  241

seq1  GGTTAACTTATAGGTTCAGAGGTTCAGTTCATTATCATCAAGGTGGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACTTATAGGTTCAGAGGTTCAGTTCATTATCATCAAGGTGGGAGC  291

seq1  ATAGCAGTATCCAGGCAGGCATGGTGCAGGAAGAGGTTAGAGTTCTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGTATCCAGGCAGGCATGGTGCAGGAAGAGGTTAGAGTTCTATAT  341

seq1  CTTTGTCCGGAGGATGCTAGAAGACTGGATTCCACGGGACTAGGAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCGGAGGATGCTAGAAGACTGGATTCCACGGGACTAGGAAGAGA  391

seq1  TTCTCATTGTCCACCCCCACGGTGACACCATTCCTCCCACAAGGCAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTGTCCACCCCCACGGTGACACCATTCCTCCCACAAGGCAACAC  441

seq1  CTCCAAATAGTGCCATTCCCTGGACCATACATATTCAAACTACCACACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAATAGTGCCATTCCCTGGACCATACATATTCAAACTACCACACCT  491

seq1  TCCTTAGATAAGTTTTCTTGGTCACCATGTGTTTTTTTTTGTTTGTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGATAAGTTTTCTTGGTCACCATGTGTTTTTTTTTGTTTGTTTTT  541

seq1  ACAGCAATAGTACACTAACAAATATAGTCAAACTTAGAAATATTATGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATAGTACACTAACAAATATAGTCAAACTTAGAAATATTATGATT  591

seq1  ATTTGTTCTAGGCTCAAAGAGTAACAATACTAGCATTCATTTTGTAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCTAGGCTCAAAGAGTAACAATACTAGCATTCATTTTGTAGAAA  641

seq1  ACTACAAAAGGGTAAGTCCTCAATGGTGTTCTAAAGTCATTAAGCCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAAGGGTAAGTCCTCAATGGTGTTCTAAAGTCATTAAGCCCTGC  691

seq1  AGCTTCTTTCAAGATGTTTCCAAACTCACAATGGATGCAAATGAGCTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTTTCAAGATGTTTCCAAACTCACAATGGATGCAAATGAGCTTCT  741

seq1  CTTTGAGGTTCTGTTGGTCAATAGTTAACGTTCAGAACAGGGCACAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGTTCTGTTGGTCAATAGTTAACGTTCAGAACAGGGCACAAATG  791

seq1  TACACAAAACCCATGCACCTTTGCTTTTCCTGTTATAGGGTCCCTCAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAACCCATGCACCTTTGCTTTTCCTGTTATAGGGTCCCTCAGCT  841

seq1  CCACAGAACACAAATGGATACATCTCCATGGAGTTGGAGATTAAAGGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAACACAAATGGATACATCTCCATGGAGTTGGAGATTAAAGGTTC  891

seq1  ATGGAAAAGATGATTTTGTTGGAGTACTTTGGATTGCGTCTAGCAAATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAGATGATTTTGTTGGAGTACTTTGGATTGCGTCTAGCAAATGA  941

seq1  ACTACTCAGATTTTTATGCTGCTAAGCCAAAGAATTC  987
      |||||||||||||||||||||||  ||||||||||||
seq2  ACTACTCAGATTTTTATGCTGCTTTGCCAAAGAATTC  978