BAC Information

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BAC

Clone NameB6Ng01-059A14
Chromosome10 (Build37)
Map Location 81,342,876 - 81,548,329
singlet/doubletdoublet
Overlap gene1700123A16Rik, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik
Upstream geneTmprss9, Timm13, Lmnb2, Gadd45b, Gng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, LOC666753
Downstream geneBC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185, Chst11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059A14.bB6Ng01-059A14.g
ACCDH880450DH880451
length1,1331,079
definitionDH880450|Mus musculus domesticus DNA, BAC clone: B6Ng01-059A14, 5' end.DH880451|Mus musculus domesticus DNA, BAC clone: B6Ng01-059A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,342,876 - 81,343,964)(81,547,239 - 81,548,329)
sequence
gaattcatgctggagagaaaccttatgagtgtaatcaatgtggaaaagct
tttctacttcgcagtagtcttctaatacatgaaagaactcatactggaga
gaaaccttatgtatgtaatcaatgtggtaaagcctttgcacgtcagagtc
atcttcaaatacatgaaagaagtcacactggagagaaaccttatgagtgt
aatcaatgcagtaaggcctttgtatgtcgcagtaatctccaaatgcatga
aagaactcacactggagagagaccttatgaatgtaatcagtgtggaaaag
ccttttcacgtcgcagtcttcttcagaaacatgaaagaagtcatagtgga
gagaaaccttatgcgtgtaatcaatgtggtaaagcctttgcaagtcgtag
tagtcttcgaaatcatgaaaaacatcataatattgagaaacctaatgaat
gtaatcagtgtgctaaagcgtttacgtcttttccaccatcttcaaatata
tgaaagaaaccacactgaaagaacctctgagtgtattcaatgtggaaaat
cctttacaagtcacagttaatcagtgtggtaaagactgcatattggagta
gtcttcattatcacagaacatgtcatactagagaaaccctatgaatggaa
ttgaaacagtaaagctttggcacatcagtgtaatcttcagatgcatcaaa
aaacttatactggagagaaaccttaaatgtaatcaatgggacaatacctc
tgcatcttatagtcgtcttcaaaggaatgaaagaattcttacaggagaga
aacaccatgaaatctaatacatgtagtaagggcttgcacaacaagcatat
tattcctcctgagtcatctcactggtgcttatgtaagattagtagaccat
ttcatccttaaatactgtcttctatttagattgtatacaaagtgttaccg
aagtatagagaacacagaaaacttgaataataaacatactttcaatgaaa
tgatatttatactgcatccattttttgtgggtttttttttcttattctgg
ggaacaatacttgttcttagcactttctcagaaccacaaattgtccaagg
aatgtcctcattgaggagttagccgccagttag
gaattctttttagaactctgtggtactataaaccttcaatccaagaattg
atgaggttggctcacaaagcctgtacagctacacagtacaaggaagacaa
ccagagtcaacataggacacccaaagtattttcctgaaagctggaggtga
ggctgttctggaattaatgtgccttcccaacgtgaaatcacaccacacat
ttagagaatagtgaagaagactctatatgataagaagtctccagcacaag
gcagcgacaagattttgctaaattatataaccgtaaagggtaggcttctg
cattcatagtctgcaaacttggtaaatgctgcttactgctcatggtcggt
tgagtgagaatggtacccaaaggctcatagatttcagtgtctggccatta
gggaatagtactacttgataagtactaggatctctggccttgttggagta
ggtgtggccttgttggaaaaagtcggtcagaaaaggtgggctgggcagtt
tcaaacgctcaagccagactgcctgctgatctgaatttagaagtcgcagc
tacctctccagcaccatgtctgctatgtatacccataatccacactgtgg
caataatgggttaaacttctggaactggaagagagccctatttgaatgat
tttctttataagtgatgctatctgtggtcttggtggctcttccacagcaa
tggaactctgactaagaaactaccctgatcttatggcttgctaagactgc
tttcttatacaactcagaactacctgccctcagtggcaccaaacacagtg
ggatgggcactattatatcaatcatttatcagagaataccctacactttt
gcccacaggacagtcttactctagcttgtgtcaacagaccgagtctccaa
cattacttctgagaaattctcccactcccaacacagacttttaacaaact
tcattacctttaaccttcgtttcagcttgtgaatgggcacactcccatgt
aaattttgaaagtctggccagtttagaacaaagaatggtcacacctaaaa
cttcgtctctatggaaagagctgggtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81342876_81343964
seq2: B6Ng01-059A14.b_101_1178

seq1  ACTTCGCAGTAGTCTTCTAATACATGAAAGAACTCATACTGGAGAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGCAGTAGTCTTCTAATACATGAAAGAACTCATACTGGAGAGAAAC  50

seq1  CTTATGTATGTAATCAATGTGGTAAAGCCTTTGCACGTCAGAGTCATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTATGTAATCAATGTGGTAAAGCCTTTGCACGTCAGAGTCATCTT  100

seq1  CAAATACATGAAAGAAGTCACACTGGAGAGAAACCTTATGAGTGTAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACATGAAAGAAGTCACACTGGAGAGAAACCTTATGAGTGTAATCA  150

seq1  ATGCAGTAAGGCCTTTGTATGTCGCAGTAATCTCCAAATGCATGAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTAAGGCCTTTGTATGTCGCAGTAATCTCCAAATGCATGAAAGAA  200

seq1  CTCACACTGGAGAGAGACCTTATGAATGTAATCAGTGTGGAAAAGCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACTGGAGAGAGACCTTATGAATGTAATCAGTGTGGAAAAGCCTTT  250

seq1  TCACGTCGCAGTCTTCTTCAGAAACATGAAAGAAGTCATAGTGGAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTCGCAGTCTTCTTCAGAAACATGAAAGAAGTCATAGTGGAGAGAA  300

seq1  ACCTTATGCGTGTAATCAATGTGGTAAAGCCTTTGCAAGTCGTAGTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATGCGTGTAATCAATGTGGTAAAGCCTTTGCAAGTCGTAGTAGTC  350

seq1  TTCGAAATCATGAAAAACATCATAATATTGAGAAACCTAATGAATGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAATCATGAAAAACATCATAATATTGAGAAACCTAATGAATGTAAT  400

seq1  CAGTGTGCTAAAGCGTTTACGTCTTTTCCACCATCTTCAAATATATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGCTAAAGCGTTTACGTCTTTTCCACCATCTTCAAATATATGAAA  450

seq1  GAAACCACACTGAAAGAACCTCTGAGTGTATTCAATGTGGAAAATCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACACTGAAAGAACCTCTGAGTGTATTCAATGTGGAAAATCCTTT  500

seq1  ACAAGTCACAGTTAATCAGTGTGGTAAAGACTGCATATTGGAGTAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCACAGTTAATCAGTGTGGTAAAGACTGCATATTGGAGTAGTCTT  550

seq1  CATTATCACAGAACATGTCATACTAGAGAAACCCTATGAATGGAATTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCACAGAACATGTCATACTAGAGAAACCCTATGAATGGAATTGAA  600

seq1  ACAGTAAAGCTTTGGCACATCAGTGTAATCTTCAGATGCATCAAAAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAGCTTTGGCACATCAGTGTAATCTTCAGATGCATCAAAAAACT  650

seq1  TATACTGGAGAGAAACCTTAAAATGTAATCAATGGGACAATACCTCTGCA  700
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATACTGGAGAGAAACCTT-AAATGTAATCAATGGGACAATACCTCTGCA  699

seq1  TCTTATAGTCGTCTTCAAAGGAATGAAAGAATTCTTACAGGAGAGAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAGTCGTCTTCAAAGGAATGAAAGAATTCTTACAGGAGAGAAACA  749

seq1  CCATGAAATCTAATACATGTAGTAAGGGCTTGCACAACAAGCATATTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAATCTAATACATGTAGTAAGGGCTTGCACAACAAGCATATTATT  799

seq1  CCTCCTGAGTCATCTCACTGGTGCTTATGTAAGATTAGTAGAACCATTTC  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTCCTGAGTCATCTCACTGGTGCTTATGTAAGATTAGTAG-ACCATTTC  848

seq1  ATCCTTAAAATACTGTCTTCTATTTAGATTGTATACAAAGTGTTACCGAA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTT-AAATACTGTCTTCTATTTAGATTGTATACAAAGTGTTACCGAA  897

seq1  GTATAGAAGAACACAGAAAAACTTGAATAATAAAACATACTTTCAAATGA  950
      |||||| ||||||||| |||||||||||||| |||||||||||| |||| 
seq2  GTATAG-AGAACACAG-AAAACTTGAATAAT-AAACATACTTTC-AATG-  942

seq1  AAATGATATTTATACTGCCATCCA-TTTTTGTGGGTTATCTTATCTTATT  999
      ||||||||||||||||| |||||| |||||||||||| | || |||||||
seq2  AAATGATATTTATACTG-CATCCATTTTTTGTGGGTTTTTTTTTCTTATT  991

seq1  CTGAGGAACAAATACTTGTTCTTAGCACTTTCTCAGAACCACAAATTTGT  1049
      ||| ||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  CTGGGGAAC-AATACTTGTTCTTAGCACTTTCTCAGAACCACAAA-TTGT  1039

seq1  CCAGAGAATGTCCTCAGTGAGTGAAGGTAGCCG-CAGTTAG  1089
      |||  ||||||||||| |||  | || |||||| |||||||
seq2  CCAAGGAATGTCCTCATTGA--GGAGTTAGCCGCCAGTTAG  1078

seq1: chr10_81547239_81548329
seq2: B6Ng01-059A14.g_68_1146 (reverse)

seq1  CAAACCCAGCTCTTCCACTAGAGCAGAAGTCTTAGTTGCTGAGCCATCTC  50
      |||||||||||||| |  |||||  ||||| |||| || ||| |||| ||
seq2  CAAACCCAGCTCTTTCCATAGAGACGAAGTTTTAGGTG-TGA-CCAT-TC  47

seq1  TTGTGTCTTAAACTTGACAGACTTTCAAAATTTTACATGTGAGTGTGCCC  100
      || |||  |||||| | ||||||||||||| |||||||| ||||||||||
seq2  TT-TGTTCTAAACTGGCCAGACTTTCAAAA-TTTACATGGGAGTGTGCCC  95

seq1  ATTTCACAGGCTGAAAACTGAGGGTTAAGGTGATTGAGGTTTGTTAAAAG  150
      | |||||| |||||||   || |||||| |  | ||| ||||||||||||
seq2  A-TTCACAAGCTGAAA--CGAAGGTTAAAGGTAATGAAGTTTGTTAAAAG  142

seq1  TCTTGTGTTTGGGAGTTGGGAG-ATGTCTCAGAGGTACTGTTTGAGACTC  199
      || |||| ||||||| |||||| || ||||||| ||| |||| |||||||
seq2  TC-TGTG-TTGGGAG-TGGGAGAATTTCTCAGAAGTAATGTTGGAGACTC  189

seq1  GGTCTGTTTGACACAAGCTAGAGTTAGACTGTCCTGTGGGCAAATGTGTA  249
      |||||| ||||||||||||||||| ||||||||||||||||||| |||||
seq2  GGTCTG-TTGACACAAGCTAGAGTAAGACTGTCCTGTGGGCAAAAGTGTA  238

seq1  GGGTATTCTCCTGATTAATGATTGATATAATAGTGCCCATCCCACTGTGT  299
      ||||||||| ||||| ||||||||||||||||||||||||||||||||||
seq2  GGGTATTCT-CTGATAAATGATTGATATAATAGTGCCCATCCCACTGTGT  287

seq1  TTGGTGCCACTGAGGGCAGGTAGTTCTGAGTTGTATAAGAAAGCAGTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCCACTGAGGGCAGGTAGTTCTGAGTTGTATAAGAAAGCAGTCTT  337

seq1  AGCAAGCCATAAGATCAGGGTAGTTTCTTAGTCAGAGTTCCATTGCTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCATAAGATCAGGGTAGTTTCTTAGTCAGAGTTCCATTGCTGTG  387

seq1  GAAGAGCCACCAAGACCACAGATAGCATCACTTATAAAGAAAATCATTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCCACCAAGACCACAGATAGCATCACTTATAAAGAAAATCATTCA  437

seq1  AATAGGGCTCTCTTCCAGTTCCAGAAGTTTAACCCATTATTGCCACAGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGCTCTCTTCCAGTTCCAGAAGTTTAACCCATTATTGCCACAGTG  487

seq1  TGGATTATGGGTATACATAGCAGACATGGTGCTGGAGAGGTAGCTGCGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTATGGGTATACATAGCAGACATGGTGCTGGAGAGGTAGCTGCGAC  537

seq1  TTCTAAATTCAGATCAGCAGGCAGTCTGGCTTGAGCGTTTGAAACTGCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATTCAGATCAGCAGGCAGTCTGGCTTGAGCGTTTGAAACTGCCC  587

seq1  AGCCCACCTTTTCTGACCGACTTTTTCCAACAAGGCCACACCTACTCCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACCTTTTCTGACCGACTTTTTCCAACAAGGCCACACCTACTCCAA  637

seq1  CAAGGCCAGAGATCCTAGTACTTATCAAGTAGTACTATTCCCTAATGGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCAGAGATCCTAGTACTTATCAAGTAGTACTATTCCCTAATGGCC  687

seq1  AGACACTGAAATCTATGAGCCTTTGGGTACCATTCTCACTCAACCGACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGAAATCTATGAGCCTTTGGGTACCATTCTCACTCAACCGACCA  737

seq1  TGAGCAGTAAGCAGCATTTACCAAGTTTGCAGACTATGAATGCAGAAGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGTAAGCAGCATTTACCAAGTTTGCAGACTATGAATGCAGAAGCC  787

seq1  TACCCTTTACGGTTATATAATTTAGCAAAATCTTGTCGCTGCCTTGTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTTACGGTTATATAATTTAGCAAAATCTTGTCGCTGCCTTGTGCT  837

seq1  GGAGACTTCTTATCATATAGAGTCTTCTTCACTATTCTCTAAATGTGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTTCTTATCATATAGAGTCTTCTTCACTATTCTCTAAATGTGTGG  887

seq1  TGTGATTTCACGTTGGGAAGGCACATTAATTCCAGAACAGCCTCACCTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTCACGTTGGGAAGGCACATTAATTCCAGAACAGCCTCACCTCC  937

seq1  AGCTTTCAGGAAAATACTTTGGGTGTCCTATGTTGACTCTGGTTGTCTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCAGGAAAATACTTTGGGTGTCCTATGTTGACTCTGGTTGTCTTC  987

seq1  CTTCTACTGTGTAGCTGTACAGGCTTTCTGAGCCAACCTCCTCAATTCTT  1049
      ||| ||||||||||||||||||||||| |||||||||||| |||||||||
seq2  CTTGTACTGTGTAGCTGTACAGGCTTTGTGAGCCAACCTCATCAATTCTT  1037

seq1  GGATTGAAGGTTTATAGTACCACAGAGTTCTAAAAAGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAAGGTTTATAGTACCACAGAGTTCTAAAAAGAATTC  1079