BAC Information

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BAC

Clone NameB6Ng01-061P10
Chromosome10 (Build37)
Map Location 54,400,311 - 54,524,839
singlet/doubletdoublet
Overlap genenone
Upstream gene4930589M24Rik, Man1a, LOC100041898
Downstream geneLOC382460, LOC100041927
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061P10.bB6Ng01-061P10.g
ACCDH882496DH882497
length414956
definitionDH882496|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P10, 5' end.DH882497|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,400,311 - 54,400,719)(54,524,271 - 54,524,839)
sequence
aatctcagaaggttgcttgtgtcaggaatacatccatttcttctaggttt
tccatcttggggcatataattgttcataacaaccttttatgatcttttgt
gtttctgtgaaattggttttaatgtatttttccatttctaattttgtttg
aatcacttctattttgtgtattttaacctctttctgtcatgttttgaatt
tatgacagaattatattttagtttgtgtccattaatatttcagaaatacc
tgttcaaatatacctctatcaactcttatgctgtgttaagatagcattta
ctcactattgttacagatctaacatcctcatttcaccttgaagtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgatt
gtgagcgtgtgtgt
gaattcaaagcacagatgcagaagttgagaaaactggatgaagcatttta
ttttgatgggttttgttctgtttatttttattggagattttatttattta
cattataaatgatatcccctttcttggtttcccctctggaaaccccctat
cccatcctccatcacctggcttctatgagggtgcttgcccacccacctac
ccacccactctgcctccctaccctagcatctagccttcacaggacaaagg
gcctttcctcccattgacatctgactaggttatcctctcctacatatgca
gctggagccatggaccactccatgtgtacttttggttggtggtttagtcc
ctgggagatctgggggatctggttggttgatatttttgtacttcccatgg
ggttgcaaaccctttcagctcctttagtgcttcccctaactcctccatta
gggacccctgtgttcagtccaatggttggctgagagcatccacctctgtg
ttggtcaagctctggcagagcctttcaggggacagctattccaagctcct
gtagcaagcacttcttagcatctgtaatagtatctgggtttggtgtctgt
gtatgagatggatccccagatggggcagtctctggatgacctttccttca
gtctctggtccatgctttgtctctgtatttcctcctgtgagtattttgtt
cccccttctaagaaggactgaagcatccacacttttggtcttccttcttc
ttgaccttcatatggtctcatgttaacattataagatagggtagatacaa
ccacagtgcctgtttataaattaatatcatatattttatcactttaataa
aaagtaaaatattttctttccatttgaactttcatttattactattctct
atattgaactctgaaatctttatcttaacttggtgattactttttctggt
tgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_54400311_54400719
seq2: B6Ng01-061P10.b_41_460

seq1  GAATTCAATCTCAGAAGGTTGCTTGTGTCAGGAATACATCCATTTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTCAGAAGGTTGCTTGTGTCAGGAATACATCCATTTCTTCT  50

seq1  AGGTTTTCCATCTTGGGGCATATAATTGTTCATAACAACCTTTTATGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCCATCTTGGGGCATATAATTGTTCATAACAACCTTTTATGATC  100

seq1  TTTTGTGTTTCTGTGAAATTGGTTTTAATGTATTTTTCCATTTCTAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTTTCTGTGAAATTGGTTTTAATGTATTTTTCCATTTCTAATTT  150

seq1  TGTTTGAATCACTTCTATTTTGTGTATTTTAACCTCTTTCTGTCATGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAATCACTTCTATTTTGTGTATTTTAACCTCTTTCTGTCATGTTT  200

seq1  TGAATTTATGACAGAATTATATTTTAGTTTGTGTCCATTAATATTTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTATGACAGAATTATATTTTAGTTTGTGTCCATTAATATTTCAGA  250

seq1  AATACCTGTTCAAATATACCTCTATCAACTCTTATGCTGTGTTAAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTGTTCAAATATACCTCTATCAACTCTTATGCTGTGTTAAGATAG  300

seq1  CATTTACTCACTATTGTTACAGATCTAACATCCTCATTTCACCTTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTCACTATTGTTACAGATCTAACATCCTCATTTCACCTTGAAGT  350

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC  400

seq1  -----TCT----GTGTGT--  409
           | |    ||||||  
seq2  GTGATTGTGAGCGTGTGTGT  420

seq1: chr10_54524271_54524839
seq2: B6Ng01-061P10.g_71_639 (reverse)

seq1  GCTAAGAAGTGCTTGCTACAGGAGCTTGGAATAGCTGTCCCCTGAAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAAGTGCTTGCTACAGGAGCTTGGAATAGCTGTCCCCTGAAAGGC  50

seq1  TCTGCCAGAGCTTGACCAACACAGAGGTGGATGCTCTCAGCCAACCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAGAGCTTGACCAACACAGAGGTGGATGCTCTCAGCCAACCATTG  100

seq1  GACTGAACACAGGGGTCCCTAATGGAGGAGTTAGGGGAAGCACTAAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAACACAGGGGTCCCTAATGGAGGAGTTAGGGGAAGCACTAAAGGA  150

seq1  GCTGAAAGGGTTTGCAACCCCATGGGAAGTACAAAAATATCAACCAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGGGTTTGCAACCCCATGGGAAGTACAAAAATATCAACCAACCA  200

seq1  GATCCCCCAGATCTCCCAGGGACTAAACCACCAACCAAAAGTACACATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCCAGATCTCCCAGGGACTAAACCACCAACCAAAAGTACACATGG  250

seq1  AGTGGTCCATGGCTCCAGCTGCATATGTAGGAGAGGATAACCTAGTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCCATGGCTCCAGCTGCATATGTAGGAGAGGATAACCTAGTCAGA  300

seq1  TGTCAATGGGAGGAAAGGCCCTTTGTCCTGTGAAGGCTAGATGCTAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATGGGAGGAAAGGCCCTTTGTCCTGTGAAGGCTAGATGCTAGGGT  350

seq1  AGGGAGGCAGAGTGGGTGGGTAGGTGGGTGGGCAAGCACCCTCATAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGCAGAGTGGGTGGGTAGGTGGGTGGGCAAGCACCCTCATAGAAG  400

seq1  CCAGGTGATGGAGGATGGGATAGGGGGTTTCCAGAGGGGAAACCAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGATGGAGGATGGGATAGGGGGTTTCCAGAGGGGAAACCAAGAAA  450

seq1  GGGGATATCATTTATAATGTAAATAAATAAAATCTCCAATAAAAATAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATATCATTTATAATGTAAATAAATAAAATCTCCAATAAAAATAAAC  500

seq1  AGAACAAAACCCATCAAAATAAAATGCTTCATCCAGTTTTCTCAACTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAACCCATCAAAATAAAATGCTTCATCCAGTTTTCTCAACTTCT  550

seq1  GCATCTGTGCTTTGAATTC  569
      |||||||||||||||||||
seq2  GCATCTGTGCTTTGAATTC  569