BAC Information

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BAC

Clone NameB6Ng01-064E04
Chromosome10 (Build37)
Map Location 35,615,231 - 35,697,360
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667824, LOC100041585
Downstream geneLOC667860, Hs3st5, Hdac2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064E04.bB6Ng01-064E04.g
ACCDH884097DH884098
length1,0571,002
definitionDH884097|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E04, 5' end.DH884098|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,615,231 - 35,616,296)(35,696,340 - 35,697,360)
sequence
gaattcagacttatcacacaccttaaatccccctgcctagaatacagaca
aggctttgctagtacacactattagttccaaagaatgtagtctgactaac
aagcagaaagagtgatgaatcagagaaagatttgacggattcagagatgg
gaaatcactaactctcgtaacaacaaacaggaaagaccagctacttaaag
agccatgggggaaagagaatgaactgagttcagttcagttcagttcagtt
cagagaagttcagagaagttcagagaagttcagtttagtttgtggcattc
agaggcagtttttttccaagcagagcaatccagtcagaagctaagagtag
ccaatttgaatcagttgtcttgaagagtttgagccagaacagctgtattg
aaccagccaggaagagttcagagagagatggaaagagcaagtttattcag
tagtaagcctcagaatatggaatattctaggcctaggttatcagatggag
gctagaagccatagctttcattcaggatcagtgctctcaggtgatcagat
tctacaaacgctaagagcttccagacttactactccaattttcccctacc
tcctcttccatccacatccaatccttttctgcatctctcattacaaaaca
aacaggcgctgggcatggtggcacacgcctttaatcccagcactcaggag
gcagaggcaggcggatttctgagttcgagtccagcctggtctaaaaagtg
aattccaggacagccagggctatagagagaaaccctgtctcaaaaactaa
acaaacaaacaaatacaaacaaaacaaaaacagcgtctaaaggattataa
taaaatataacaaatgtgagcgcccgactcgccagcaaagcagatgccac
acaggatccttctgcacatgtttattggagagcttgattgcagaggtgag
agaccctgagccagtactgttgctgctatatagcctaggagaggcatttc
tcacacccatgtatgctttcagcactcatttgcattgtctcacatccgat
gtatgct
gaattcagaagaaatcaatgtgccttttgtgtttcttttgagagattttg
aaagaaaatccatttcttgcccctcccacatctttgagctcactgtaatg
tctttctctttcccttacatgtgtcagctctaatgtttgtagagaattca
tctgtacagtccagaagttgctccattcaaccttcctgttcccaccatct
ctggagttctgttgtcatgagtgatgacatattcacagtccctaagactt
aaatgcttactattgtggaagtgacattttatccctaaggtactttctag
gattaaagaacacagtggaattgataaatagcataatcctcagatatgtg
cacagattaattctaatccttgagtacagtccttttcttgtaagatttca
gctgctgatctgtagataccaggaagttattcctcaaatttatatgaaag
aggaagaaacacagaacagcccaaaacagttatgaaaagaaaaaactgaa
acatagagggaaagcattccaaatccaaaacctaaagaaatcatcttcag
aagagactctgtcaggcctaaggatagatgtttagatcaatagaataaaa
aatgggaggtcagaaattaactcctatctaagaccaattgctcagatttg
gaggaaaagaaaagttttctaagtgttaatacccaaaaatatattcattg
ctgagacagaatttaaagtatcctcactttcctgaaggtgaattgtattt
ggaaacttcatctaccattcacatgaggataagaagtaagtgacaagtta
tcaaagactgaatggtggtaattgtcctagttatggttgtttctattgct
gaggcaagatactgtgacgaaaagcagttggagagaaatgatttatttgg
gtcaaacttcatattggtgatatattaaaggcaaagtcacagatgactca
acaggcagatctagagctagagctgatgagagcccagagatgctgctgac
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35615231_35616296
seq2: B6Ng01-064E04.b_53_1100

seq1  CTTATCACACACCTTAAATCCCCCTGCCTAGAATACAGACAAGGCTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCACACACCTTAAATCCCCCTGCCTAGAATACAGACAAGGCTTTGC  50

seq1  TAGTACACACTATTAGTTCCAAAGAATGTAGTCTGACTAACAAGCAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACACACTATTAGTTCCAAAGAATGTAGTCTGACTAACAAGCAGAAA  100

seq1  GAGTGATGAATCAGAGAAAGATTTGACGGATTCAGAGATGGGAAATCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATGAATCAGAGAAAGATTTGACGGATTCAGAGATGGGAAATCACT  150

seq1  AACTCTCGTAACAACAAACAGGAAAGACCAGCTACTTAAAGAGCCATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCGTAACAACAAACAGGAAAGACCAGCTACTTAAAGAGCCATGGG  200

seq1  GGAAAGAGAATGAACTGAGTTCAGTTCAGTTCAGTTCAGTTCAGAGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGAATGAACTGAGTTCAGTTCAGTTCAGTTCAGTTCAGAGAAGT  250

seq1  TCAGAGAAGTTCAGAGAAGTTCAGTTTAGTTTGTGGCATTCAGAGGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAGTTCAGAGAAGTTCAGTTTAGTTTGTGGCATTCAGAGGCAGT  300

seq1  TTTTTTCCAAGCAGAGCAATCCAGTCAGAAGCTAAGAGTAGCCAATTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCAAGCAGAGCAATCCAGTCAGAAGCTAAGAGTAGCCAATTTGA  350

seq1  ATCAGTTGTCTTGAAGAGTTTGAGCCAGAACAGCTGTATTGAACCAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTGTCTTGAAGAGTTTGAGCCAGAACAGCTGTATTGAACCAGCCA  400

seq1  GGAAGAGTTCAGAGAGAGATGGAAAGAGCAAGTTTATTCAGTAGTAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTTCAGAGAGAGATGGAAAGAGCAAGTTTATTCAGTAGTAAGCC  450

seq1  TCAGAATATGGAATATTCTAGGCCTAGGTTATCAGATGGAGGCTAGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATATGGAATATTCTAGGCCTAGGTTATCAGATGGAGGCTAGAAGC  500

seq1  CATAGCTTTCATTCAGGATCAGTGCTCTCAGGTGATCAGATTCTACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTTTCATTCAGGATCAGTGCTCTCAGGTGATCAGATTCTACAAAC  550

seq1  GCTAAGAGCTTCCAGACTTACTACTCCAATTTTCCCCTACCTCCTCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAGCTTCCAGACTTACTACTCCAATTTTCCCCTACCTCCTCTTCC  600

seq1  ATCCACATCCAATCCTTTTCTGCATCTCTCATTACAAAACAAACAGGCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACATCCAATCCTTTTCTGCATCTCTCATTACAAAACAAACAGGCGC  650

seq1  TGGGCATGGTGGCACACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATGGTGGCACACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCA  700

seq1  GGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTAAAAAGTGAATTCCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGATTTCTGAGTTCGAGTCCAGCCTGGTCTAAAAAGTGAATTCCAGG  750

seq1  ACAGCCAGGGCTATAGAGAGAAACCCTGTCTCAAAAAACTAAACAAACAA  800
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAGCCAGGGCTATAGAGAGAAACCCTGTCTC-AAAAACTAAACAAACAA  799

seq1  ACAAAATACAAAACAAAACAAAAAACAGCGTCTAAGGGATTATAATAAAA  850
      || |||||| ||||||||| ||||||||||||||| ||||||||||||||
seq2  AC-AAATAC-AAACAAAAC-AAAAACAGCGTCTAAAGGATTATAATAAAA  846

seq1  TATAACAAAATGTGAGCGCCCGACTCGCCAGCAAAGCAGATGCCACAACA  900
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  TATAAC-AAATGTGAGCGCCCGACTCGCCAGCAAAGCAGATGCCAC-ACA  894

seq1  GGATCCTTCTGCACATGTTTATTGGGAGAGCTTGATTGCAGAGGTGAGAA  950
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  GGATCCTTCTGCACATGTTTATT-GGAGAGCTTGATTGCAGAGGTGAG-A  942

seq1  GACCCTGAGCCCAGTACTGTTGCTGCTTATATAGGCCTAGGAGAGGCATG  1000
      ||||||||| |||||||||||||||| |||||| ||||||||||||||| 
seq2  GACCCTGAG-CCAGTACTGTTGCTGC-TATATA-GCCTAGGAGAGGCATT  989

seq1  TCTCACACCCAATTGGTTATGCTTTCAGCACCTCATTTGCA-TGTCTCAC  1049
      |||||||||||  ||  ||||||||||||| |||||||||| ||||||||
seq2  TCTCACACCCA--TG--TATGCTTTCAGCA-CTCATTTGCATTGTCTCAC  1034

seq1  ATCCGATTGGTTATGCT  1066
      |||||||    ||||||
seq2  ATCCGAT---GTATGCT  1048

seq1: chr10_35696340_35697360
seq2: B6Ng01-064E04.g_65_1066 (reverse)

seq1  CAGTCAGCAGCATCCTCTGGGGCTTCTC-CATCAGCTCTTAGCTCTAGGA  49
      ||||||||||||| |||||||    ||| ||||||||| |||||||||  
seq2  CAGTCAGCAGCAT-CTCTGGG----CTCTCATCAGCTC-TAGCTCTAG--  42

seq1  TTCTGCCCTGTTTGAGTTCATCTTGTGACTTTTGCCTTTAATAATAATCA  99
       |||| |||| ||||| ||||| |||||| |||||||||||||   ||||
seq2  ATCTG-CCTG-TTGAG-TCATC-TGTGAC-TTTGCCTTTAATA--TATCA  85

seq1  CCAATATGGAAGTTTGAACCAAATAAATCATTTTCTCTCCAACTTGCTTT  149
      ||||||| ||||||||| |||||||||||| |||||||||||| ||| ||
seq2  CCAATAT-GAAGTTTGACCCAAATAAATCA-TTTCTCTCCAAC-TGC-TT  131

seq1  TTCGTCACAGTATCTTGCCTCAGCAATAGAAACAAACCATAACTAGGACA  199
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCGTCACAGTATCTTGCCTCAGCAATAGAAAC-AACCATAACTAGGACA  180

seq1  ATTACCACCATTCAGTCTTTGATAACTTGTCACTTACTTCTTATCCTCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCACCATTCAGTCTTTGATAACTTGTCACTTACTTCTTATCCTCAT  230

seq1  GTGAATGGTAGATGAAGTTTCCAAATACAATTCACCTTCAGGAAAGTGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGTAGATGAAGTTTCCAAATACAATTCACCTTCAGGAAAGTGAG  280

seq1  GATACTTTAAATTCTGTCTCAGCAATGAATATATTTTTGGGTATTAACAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTTAAATTCTGTCTCAGCAATGAATATATTTTTGGGTATTAACAC  330

seq1  TTAGAAAACTTTTCTTTTCCTCCAAATCTGAGCAATTGGTCTTAGATAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAACTTTTCTTTTCCTCCAAATCTGAGCAATTGGTCTTAGATAGG  380

seq1  AGTTAATTTCTGACCTCCCATTTTTTATTCTATTGATCTAAACATCTATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTTCTGACCTCCCATTTTTTATTCTATTGATCTAAACATCTATC  430

seq1  CTTAGGCCTGACAGAGTCTCTTCTGAAGATGATTTCTTTAGGTTTTGGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCCTGACAGAGTCTCTTCTGAAGATGATTTCTTTAGGTTTTGGAT  480

seq1  TTGGAATGCTTTCCCTCTATGTTTCAGTTTTTTCTTTTCATAACTGTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATGCTTTCCCTCTATGTTTCAGTTTTTTCTTTTCATAACTGTTTT  530

seq1  GGGCTGTTCTGTGTTTCTTCCTCTTTCATATAAATTTGAGGAATAACTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTTCTGTGTTTCTTCCTCTTTCATATAAATTTGAGGAATAACTTC  580

seq1  CTGGTATCTACAGATCAGCAGCTGAAATCTTACAAGAAAAGGACTGTACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATCTACAGATCAGCAGCTGAAATCTTACAAGAAAAGGACTGTACT  630

seq1  CAAGGATTAGAATTAATCTGTGCACATATCTGAGGATTATGCTATTTATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATTAGAATTAATCTGTGCACATATCTGAGGATTATGCTATTTATC  680

seq1  AATTCCACTGTGTTCTTTAATCCTAGAAAGTACCTTAGGGATAAAATGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACTGTGTTCTTTAATCCTAGAAAGTACCTTAGGGATAAAATGTC  730

seq1  ACTTCCACAATAGTAAGCATTTAAGTCTTAGGGACTGTGAATATGTCATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACAATAGTAAGCATTTAAGTCTTAGGGACTGTGAATATGTCATC  780

seq1  ACTCATGACAACAGAACTCCAGAGATGGTGGGAACAGGAAGGTTGAATGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGACAACAGAACTCCAGAGATGGTGGGAACAGGAAGGTTGAATGG  830

seq1  AGCAACTTCTGGACTGTACAGATGAATTCTCTACAAACATTAGAGCTGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTCTGGACTGTACAGATGAATTCTCTACAAACATTAGAGCTGAC  880

seq1  ACATGTAAGGGAAAGAGAAAGACATTACAGTGAGCTCAAAGATGTGGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAGGGAAAGAGAAAGACATTACAGTGAGCTCAAAGATGTGGGAG  930

seq1  GGGCAAGAAATGGATTTTCTTTCAAAATCTCTCAAAAGAAACACAAAAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGAAATGGATTTTCTTTCAAAATCTCTCAAAAGAAACACAAAAGG  980

seq1  CACATTGATTTCTTCTGAATTC  1021
      ||||||||||||||||||||||
seq2  CACATTGATTTCTTCTGAATTC  1002