BAC Information

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BAC

Clone NameB6Ng01-064I18
Chromosome10 (Build37)
Map Location 45,528,789 - 45,529,894
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364, Hace1
Downstream geneLOC664781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064I18.bB6Ng01-064I18.g
ACCDH884301DH884302
length1,2451,081
definitionDH884301|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I18, 5' end.DH884302|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gagttcaactgcataagtaggcaatgttgatcccataaaatatagaatat
taaatgaaacttaaagttcaaggcatgaatgacccctaagagttatgagc
caagttgtccttgattattctccatagttgcatgataagactgcattgct
taaggcaccacacacattttggttgcaggacataaagaaaccaatctcaa
accaataaggtgacctcctctctgctgaacagttttcatagtacttgaat
gtgccatacaggctgctggagcaaagagaacatcattagtcttacctact
gctggaccctgaatactgcaacatcagctttccaggcaagataagtccac
aaacacagtagtgacacagatgttaaaaaagtaaccaacccctttctgat
tggatctgatacctgctccacaggaggaaactatatgcctggtacagcaa
tcctggtcaagattctatggctggagaagtaatagaccttgagaagaact
gctcatattactttcctaaatggtccatgggataagattttcttctaaat
gttaatacatatacctatagacctactcccaaacttggtcagagaagcct
cttttagaggagggcaacagtcaatgcataaatgcaaagtagtcaaagtg
ctgagaataaaagactgactgttcagcaataaatagtgcatgtatatcac
acaccttccatcagtgttcaggaaacattgtagaggacaaggtaaaaaga
atgtaaaaaagcaaagaatgggaagcagtgttgcttagtgtggtcttcta
gatatgacatacatatcaggattcctgaattagcagatgttctgcttttc
tgcacactacctatgcaaaatgaatccagacaaaatgtagcttagatacc
tcagtgaactcaggttccattcaccaaagaattattgcagctcatagttt
ctgggagaagataatcctttattgaactatggcaactgtaagttttcact
cccctgtgaatagccctatacccatgcacatattgaagcactaacagact
taaggtataacaataaataatagatagtagttaataaatattaataataa
ttataatatagaagtgtatttaaaaatgaattgaaaggaagttgagacgt
gtctgatggggattagggcatatcgtattcgataccagctatatgtagta
aacttatgtcaaagcccatagtatctaaaatctgcccatagtagc
gaattctaggccaagtttcaggtcttgctatgttattaatggcagtgtca
gatgggttttgagtgacaatgtacccttgctctcaaagtccatgtctctc
catgcctatcaccatttaaaatatttatttgcttttgttttgttggtgta
tgtttcgcctgcatgaacatatgtgcaccttgtgcatgcccctggcatct
gagggggccagaagagggtgtcagatcccttggaactggagttactgtgt
gctgccacgtagttgttaggaactcaatggtcctgccctcagtggtcttc
actgcagagccatccctatagcctcgacaaccgttttctcaagagtgtta
tcctgctttagttttgccccatggtgtctgacacacgggggatatgatga
gaggaacttaaggagggttatttcagctcacagttcaagggtataggcta
gcatgttggggaagtcccagcagcagagactgaggtagctcttcacattg
cagaaaagcagcaaagcggaaggggcagacacatgcatgctagtgctcag
tcacttctgctttctcaggtgtaagacccacagtggatcttcctgcaaca
caacataatctagacacccgtcccacccatgctcaaggtcccttctccca
ggcgacgccagattctgtcaagttgacaattaactccaaccttcactctt
tttgatagaaagaaaacatccacttcccatttgattgaccacagcagttc
atatagatctacttcttttgcctgggcagttaagtgcagtattctcccat
tccaggaagcagggtacaccatcaacaaacggcatgggtacaaagctttc
agaaaaatgtaaaataaataaaactgcttttcctttccaggcctttctcc
agaataagactctgagactaattatttatgaataatgtctttgctacgag
ccttgactcatctctgactagctgtacttatttaacccatccaaccattt
tatacttcacacagctgtaacctcatctgtctgaccctttctcctcagtc
ccctgacatctcccttatcatcctttaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45528789_45529894
seq2: B6Ng01-064I18.g_67_1147

seq1  GAATTCTAGGCCAAGTTTCAGGTCTTGCTATGTTATTAATGGCAGTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAAGTTTCAGGTCTTGCTATGTTATTAATGGCAGTGTCA  50

seq1  GATGGGTTTTGAGTGACAATGTACCCTTGCTCTCAAAGTCCATGTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTTTTGAGTGACAATGTACCCTTGCTCTCAAAGTCCATGTCTCTC  100

seq1  CATGCCTATCACCATTTAAAATATTTATTTGCTTTTGTTTTGTTGGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTATCACCATTTAAAATATTTATTTGCTTTTGTTTTGTTGGTGTA  150

seq1  TGTTTCGCCTGCATGAACATATGTGCACCTTGTGCATGCCCCTGGCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCGCCTGCATGAACATATGTGCACCTTGTGCATGCCCCTGGCATCT  200

seq1  GAGGGGGCCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTACTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGCCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTACTGTGT  250

seq1  GCTGCCACGTAGTTGTTAGGAACTCAATGGTCCTGCCCTCAGTGGTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCACGTAGTTGTTAGGAACTCAATGGTCCTGCCCTCAGTGGTCTTC  300

seq1  ACTGCAGAGCCATCCCTATAGCCTCGACAACCGTTTTCTCAAGAGTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGAGCCATCCCTATAGCCTCGACAACCGTTTTCTCAAGAGTGTTA  350

seq1  TCCTGCTTTAGTTTTGCCCCATGGTGTCTGACACACGGGGGATATGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTTAGTTTTGCCCCATGGTGTCTGACACACGGGGGATATGATGA  400

seq1  GAGGAACTTAAGGAGGGTTATTTCAGCTCACAGTTCAAGGGTATAGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTTAAGGAGGGTTATTTCAGCTCACAGTTCAAGGGTATAGGCTA  450

seq1  GCATGTTGGGGAAGTCCCAGCAGCAGAGACTGAGGTAGCTCTTCACATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTGGGGAAGTCCCAGCAGCAGAGACTGAGGTAGCTCTTCACATTG  500

seq1  CAGAAAAGCAGCAAAGCGGAAGGGGCAGACACATGCATGCTAGTGCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGCAGCAAAGCGGAAGGGGCAGACACATGCATGCTAGTGCTCAG  550

seq1  TCACTTCTGCTTTCTCAGGTGTAAGACCCACAGTGGATCTTCCTGCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTGCTTTCTCAGGTGTAAGACCCACAGTGGATCTTCCTGCAACA  600

seq1  CAACATAATCTAGACACCCGTCCCACCCATGCTCAAGGTCCCTTCTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAATCTAGACACCCGTCCCACCCATGCTCAAGGTCCCTTCTCCCA  650

seq1  GGCGACGCCAGATTCTGTCAAGTTGACAATTAACTCCAACCTTCACTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACGCCAGATTCTGTCAAGTTGACAATTAACTCCAACCTTCACTCTT  700

seq1  TTTGATAGAAAGAAAACATCCACTTCCCATTTGATTGACCACAGCAGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAGAAAGAAAACATCCACTTCCCATTTGATTGACCACAGCAGTTC  750

seq1  ATATAGATCTACTTCTTTTGCCTGGGCAGTTAAGTGCAGTATTCTCCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATCTACTTCTTTTGCCTGGGCAGTTAAGTGCAGTATTCTCCCAT  800

seq1  TCCAGGAAGCAGGGTACACCATCAACAAACGGCATGGTCACAAAAGCTTT  850
      |||||||||||||||||||||||||||||||||||||  || ||||||||
seq2  TCCAGGAAGCAGGGTACACCATCAACAAACGGCATGGGTAC-AAAGCTTT  849

seq1  CAGAAAAAATGTAAAATAAATAAAACTGCTTTTCCTTTCCAGGCCTTTCT  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAG-AAAAATGTAAAATAAATAAAACTGCTTTTCCTTTCCAGGCCTTTCT  898

seq1  CCAAGAATAAGACTCTGAGACTAATTATTTATTAATAAATGTCTTTGCTA  950
      || ||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  CC-AGAATAAGACTCTGAGACTAATTATTTATGAAT-AATGTCTTTGCTA  946

seq1  CGAGCCTTGACTCATTCTCTGACTAGCTTGTAACTTATTTAACCCATCCA  1000
      |||||||||||||| |||||||||||| ||| ||||||||||||||||| 
seq2  CGAGCCTTGACTCA-TCTCTGACTAGC-TGT-ACTTATTTAACCCATCC-  992

seq1  AACTATTTTATATCTTCCACACAGCCTGTAACCTCTCCTTCTGTCCTGAC  1050
      ||| |||||||| ||| ||||||| |||||||||   | ||||| |||||
seq2  AACCATTTTATA-CTT-CACACAG-CTGTAACCT---CATCTGT-CTGAC  1035

seq1  CTCTTTCTTCCTCAGTGTCTCCCCTAGCATCTCCCCTTATTCACTCCTTT  1100
      | ||||| |||||||    ||||||  ||||| |||||| ||| ||||||
seq2  C-CTTTC-TCCTCAG----TCCCCTGACATCT-CCCTTA-TCA-TCCTTT  1076

seq1  ATATCT  1106
      | ||||
seq2  A-ATCT  1081