BAC Information

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BAC

Clone NameB6Ng01-064L19
Chromosome10 (Build37)
Map Location 68,680,638 - 68,850,978
singlet/doubletdoublet
Overlap geneRhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371
Upstream geneArid5b, LOC100040136, 1700040L02Rik, EG665342, Tmem26, A930033H14Rik
Downstream geneAnk3, LOC100039734, 5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064L19.bB6Ng01-064L19.g
ACCDH884433DH884434
length941,082
definitionDH884433|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L19, 5' end.DH884434|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,850,885 - 68,850,978)(68,680,638 - 68,681,731)
sequence
ctactttctcccaagtgctggaattactaccaccatgcctggctctcatt
tctcttttttttttttttgaaggcggggtgggggattggggagg
gaattcaaaatgagttacaaaaagctaagggacaaaggagaaggaagcgg
gaggtcagagaaaatatggactcggtggaaagggggagagggaaagaagg
ctgggagggcggcaggaggcagtgctcagggacagaatggctacaggttg
gctatttaaagtagtttagtttagtttagtttagtttagtttagtttagt
ttagtttagtttagtttagtttagtttgagaaacacataaatccagtgac
tttaacataaaaccagctatctctcctcccagctcttttgttccacaggc
accttagggcagaggttggaaaatcagccaatcaagacacaggaaatgaa
ggatacgcatagccaggttttcccagacacctgatgtcttcagatattcc
ctctagccgggacccagacatatggactgggaagggtgaactgtcaggag
gtcctgacagagcaattacgcttctctacaccactcttgagtttttcttt
cttgggtaatgacaagttcccagtgtttatgggttttgatctcaggctcc
atctctcagtggagaattgtcttttaatttttttagcccaccataagcca
aaccaagtgaccctcttctaacacatagaccagctagaccaacaacttgg
gcttcttacattcttctgagatgccaagtgtttgactgcactatgcctgg
tattcatttttagttccagtttacggaagcacaaagagaggaagagaagg
tcaagaaacttgattacaaagcttagattggggttcactgtagcctgaca
gagaagttgaatacatcctagatgaactccagcctggagggtactttaaa
cctttcccttccagttactctcgcaattatgaggaaacacaggttatcaa
ggacacatttctaccaaccacacatattggagcgaacacttgtctgagct
acctaactctgctgactatgggtcatttccaatgtatgttgcaagacata
aaccctaagtcaatgccagctgaatccatggagccaggaaagtcctataa
ggtcactcgttaacctcccctccggggacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_68850885_68850978
seq2: B6Ng01-064L19.b_55_148 (reverse)

seq1  CCTCCCCAATCCCCCACCCCGCCTTCAAAAAAAAAAAAAAGAGAAATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCAATCCCCCACCCCGCCTTCAAAAAAAAAAAAAAGAGAAATGAG  50

seq1  AGCCAGGCATGGTGGTAGTAATTCCAGCACTTGGGAGAAAGTAG  94
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCATGGTGGTAGTAATTCCAGCACTTGGGAGAAAGTAG  94

seq1: chr10_68680638_68681731
seq2: B6Ng01-064L19.g_69_1150

seq1  GAATTCAAAATGAGTTACAAAAAGCTAAGGGACAAAGGAGAAGGAAGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGAGTTACAAAAAGCTAAGGGACAAAGGAGAAGGAAGCGG  50

seq1  GAGGTCAGAGAAAATATGGACTCGGTGGAAAGGGGGAGAGGGAAAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGAGAAAATATGGACTCGGTGGAAAGGGGGAGAGGGAAAGAAGG  100

seq1  CTGGGAGGGCGGCAGGAGGCAGTGCTCAGGGACAGAATGGCTACAGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGGCGGCAGGAGGCAGTGCTCAGGGACAGAATGGCTACAGGTTG  150

seq1  GCTATTTAAAGTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGT  200
      |||||||||||          |||||||||||||||||||||||||||||
seq2  GCTATTTAAAG----------TAGTTTAGTTTAGTTTAGTTTAGTTTAGT  190

seq1  TTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTGAGAAACACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTGAGAAACACATAA  240

seq1  ATCCAGTGACTTTAACATAAAACCAGCTATCTCTCCTCCCAGCTCTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGACTTTAACATAAAACCAGCTATCTCTCCTCCCAGCTCTTTTG  290

seq1  TTCCACAGGCACCTTAGGGCAGAGGTTGGAAAATCAGCCAATCAAGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGGCACCTTAGGGCAGAGGTTGGAAAATCAGCCAATCAAGACAC  340

seq1  AGGAAATGAAGGATACGCATAGCCAGGTTTTCCCAGACACCTGATGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGAAGGATACGCATAGCCAGGTTTTCCCAGACACCTGATGTCTT  390

seq1  CAGATATTCCCTCTAGCCGGGACCCAGACATATGGACTGGGAAGGGTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTCCCTCTAGCCGGGACCCAGACATATGGACTGGGAAGGGTGAA  440

seq1  CTGTCAGGAGGTCCTGACAGAGCAATTACGCTTCTCTACACCACTCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGAGGTCCTGACAGAGCAATTACGCTTCTCTACACCACTCTTGA  490

seq1  GTTTTTCTTTCTTGGGTAATGACAAGTTCCCAGTGTTTATGGGTTTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTTTCTTGGGTAATGACAAGTTCCCAGTGTTTATGGGTTTTGAT  540

seq1  CTCAGGCTCCATCTCTCAGTGGAGAATTGTCTTTTAATTTTTTTAGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTCCATCTCTCAGTGGAGAATTGTCTTTTAATTTTTTTAGCCCA  590

seq1  CCATAAGCCAAACCAAGTGACCCTCTTCTAACACATAGACCAGCTAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGCCAAACCAAGTGACCCTCTTCTAACACATAGACCAGCTAGACC  640

seq1  AACAACTTGGGCTTCTTACATTCTTCTGAGATGCCAAGTGTTTGACTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTGGGCTTCTTACATTCTTCTGAGATGCCAAGTGTTTGACTGCA  690

seq1  CTATGCCTGGTATTCATTTTTAGTTCCAGTTTACGGAAGCACAAAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCTGGTATTCATTTTTAGTTCCAGTTTACGGAAGCACAAAGAGAG  740

seq1  GAAGAGAAGGTCAAGAAAC-TGATAACAAAGCTTAGATT-GGGTTCACTG  798
      ||||||||||||||||||| |||| |||||||||||||| ||||||||||
seq2  GAAGAGAAGGTCAAGAAACTTGATTACAAAGCTTAGATTGGGGTTCACTG  790

seq1  TAGCCTGACAGAGAAGTTGAATACATCCTAGATGAACTCCAGCCT-GAGG  847
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAGCCTGACAGAGAAGTTGAATACATCCTAGATGAACTCCAGCCTGGAGG  840

seq1  GTACTTTAAACCTTTCCCTTCCAGGTTACTCTCGCAA-TATGA-GAAACA  895
      ||||||||||||||||||||||| ||||||||||||| ||||| ||||||
seq2  GTACTTTAAACCTTTCCCTTCCA-GTTACTCTCGCAATTATGAGGAAACA  889

seq1  CAGG-TATCAAAGGACACATTTCTACACACCACACATATT-GAGCGAACA  943
      |||| |||| ||||||||||||||||  |||||||||||| |||||||||
seq2  CAGGTTATC-AAGGACACATTTCTACCAACCACACATATTGGAGCGAACA  938

seq1  CATTGTCTGAGCTACCTAAACTCTGCTGACTATGGGTCATTTCCAATGTA  993
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  C-TTGTCTGAGCTACCT-AACTCTGCTGACTATGGGTCATTTCCAATGTA  986

seq1  TGTTGTCACAGACATAAACACTTAAGTCAATGCCAGCTGAAT-CATGGAG  1042
      ||||| || |||||||||| | |||||||||||||||||||| |||||||
seq2  TGTTG-CA-AGACATAAAC-CCTAAGTCAATGCCAGCTGAATCCATGGAG  1033

seq1  TCAAGGAAAGTCCCTATAAGGCCACTCGTTTGAGCCT-CCCTCCGGTGAC  1091
       | |||||||| ||||||||| ||||||||  | ||| |||||||| |||
seq2  -CCAGGAAAGT-CCTATAAGGTCACTCGTT--AACCTCCCCTCCGGGGAC  1079

seq1  AAA  1094
      |||
seq2  AAA  1082