BAC Information

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BAC

Clone NameB6Ng01-065L10
Chromosome10 (Build37)
Map Location 104,053,459 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065L10.bB6Ng01-065L10.g
ACCDH885107DH885108
length1,143960
definitionDH885107|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L10, 5' end.DH885108|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatggtactactggaggatcaagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcataacagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaa
ggaactcgcacaatatgtactcattgataagtggataatagcccagaaac
ttaggatacccaagatataagatacaacttgccaaacgcatgaaattcaa
gaagaacgaagaccaaagtgtggacactttaccctttcttagaaatggaa
acaaaacacccatagaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgactgccatatgcagggatccatcccataat
cagcttccaaatactgacaccattgcatacactagcaagatttcgctgaa
aggacccagttatagctctctcttgtgagactatgcccggggcctagcaa
acacagaagtggatgatcacagtcagctattggatgggtcacacgcccct
aatgagagctagagaaattacccagagctataggaactgcaccctatagt
ggaacaacattatgactacagtacccggagctcttgtctttagctacaat
tatcaaagatgctagtcgcattcctgcaaaagagtcatgacttgtacttt
attgccagtaggtacgccagtcaaaggaatgcttgtatggaat

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaattttctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttaattaatacttgctaatctctcatggat
gtatatttatcccattcataaatttctgttcaggtttggtcatcatgatt
ttgtttctcataaatagatttttcttaaaatttgtacttattctcttggc
atcacttttcgcattcaccattgctataacagattgttcattctcaattt
ccttttaacttgtttctcttcacttacttaaaactcattaaatccatata
tgtagtgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053459_104054363
seq2: B6Ng01-065L10.g_67_759 (reverse)

seq1  TTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTC-GTTCTCTTGAGT  49
      ||||||| ||||||| |||||||||||||  ||||||  || ||||||||
seq2  TTCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTTTTCTTGAGT  50

seq1  TTAATGTGTTTAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCT  99
      || |||||||||| ||||||||||||||||| ||||||||||| |||| |
seq2  TTCATGTGTTTAGAAAATTGTATCTTATATCGTGGGTATCCTAGGTTT-T  99

seq1  GGGCTAATATCCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTG  149
      |||||| ||||||||||||||||||||||||||| | |||||||||||||
seq2  GGGCTAGTATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTG  149

seq1  ATTGGGTTACCGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCT  199
      |||| |||||| ||||||||||||| ||||||||||||||||||||| ||
seq2  ATTGTGTTACCTCACTCAGGATGATGCTCTCCAGGTCCATCCATTTGGCT  199

seq1  AGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAATTT  249
      ||||||||||||||||||||||||||||||||                  
seq2  AGGAATTTCATAAATTCATTCTTTTTAATAGC------------------  231

seq1  AATTAATGTAATTACAATTAATTAATTTATTAATTAAATAATTTAATAAT  299
                                                        
seq2  --------------------------------------------------  231

seq1  TTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAATA  349
                                                        
seq2  --------------------------------------------------  231

seq1  ATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAATTTTATAAG  399
                                                    | ||
seq2  ----------------------------------------------TGAG  235

seq1  TAAATAATTTAATTAATGTAATTTAATTAATGTAATTACATTACATTTAA  449
      ||                             |||                
seq2  TA-----------------------------GTA----------------  240

seq1  TAGCTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTG  499
         |||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  ---CTCCATTGTGTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTG  287

seq1  AGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCT  549
      ||||||||||||||||||||||| | ||||||||||||||||||||||||
seq2  AGGGGCATCTGGGTTCTTTCCAGTTTCTGGCTATTATAAATAAGGCTGCT  337

seq1  ATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGG  599
      ||||| |||||||||||||||||||||||||| |||||||| ||||||||
seq2  ATGAACATAGTGGAGCATGTGTCCTTCTTACCAGTTGGGGCTTCTTCTGG  387

seq1  ATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCA  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATATATGCCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCA  437

seq1  ATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTG  699
      ||||||||| |||| ||||||| |||||||||||||||||||||||||||
seq2  ATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTG  487

seq1  CAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCA  537

seq1  GCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGA  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTCACTGGTGTGA  587

seq1  GGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGAT  637

seq1  GTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGA  687

seq1  GAATTC  905
      ||||||
seq2  GAATTC  693


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