BAC Information

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BAC

Clone NameB6Ng01-071G01
Chromosome10 (Build37)
Map Location 68,972,449 - 69,194,036
singlet/doubletdoublet
Overlap geneAnk3, LOC100039734
Upstream gene1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371
Downstream gene5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071G01.bB6Ng01-071G01.g
ACCDH889095DH889096
length1,1221,107
definitionDH889095|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G01, 5' end.DH889096|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,192,916 - 69,194,036)(68,972,449 - 68,973,538)
sequence
gaattcttcctggactgggctgcgagagtttacacaccttaggtggtgat
tcttaaaagcttctgtcctttgggctgtaggaatcactgtgtgccagggt
ttaggaattttcatttctatacggtgaaaagccctttgtttcttttccaa
ggtggaacattgtttcaccttgcaatgtttccactactttgtgaggtggc
agaagcctcatcaattacaggctgcgggtccatccattcactctcccctg
ctgtactgcgggaggtccccgacccagatccttgtcctctgtgacattta
aatctagaccagcaatcactcgctaaaggatgcagcccttcaaggagcag
actagagcgcccagtgcttttcaaacttaaatattagtatcctgccaacc
cctgatactaaatgtttctgtcctctgggttttcaaagcacggagggaag
acatgtgtgtttcagatggcgagggcctgccgggagtgcagatgggaatt
ttatggcttgtcgaatgcttttctattttaatgaagagaataaattacaa
cagcagtgtgatttcattcccttccccatgtgctgcagtaatgaaatcaa
cgtagccctctgtcctgggctcccctctcttggcatggtgaggtttactc
caaacctaatggtgatttctcaagaatatcacacgggctctgaacaggat
gggaaggtctctaactgcaaacattgaatgcagacagaagacgcagtatc
ctctggtcatcacgagttcaggggccgatcccgtcattttctgcagcagc
ctgcaggcacagaggatgcctgtgtatgcatggatatgtaaacagggttt
gactgatattctctttttagagagaggcagataggaggcccacacaagcc
ctgctactctgaccctgggagtatcctaggatatagggcttcagccatga
ctatattgatcttctaaattgacattagctcattctttttaaatttttta
taagtgtgaatggtgtgtatttgtggtgtggacacattgtttgtgtgcat
gcacatatgttgggaggttagagggttgatgcgctagggtcttccatcct
cctctgtgttgattacttatgg
gaattcagcgtctcaggagaccatggaaattctgtatcccgtggagctta
gctgcaggctgagttttgagggccatgcaggatgctttctctttctctct
tttcctggtggttcatgtttcccatactgcccgcacactcactgtgcagc
agaggacgatcctcctgcatctgcctcccaaatgctgccgttacaggggt
gtgtgctttatatggtattgggtactgagcctagggcttcatgcatggat
acaaatattctactgagtcacagcatcaacactgtgtaggatttcagtga
cagaaatgacactggaggaaagggtgggtgtggcagtggcagagatgggg
aatgacatcatgtaatctggtgcctctgtcctaagcaggggtttttctct
ttgtctctgtctctctgtctctgtctctccctatcctcctcccctccccg
tctctcccctccctctttctctccctctttcccccttcccactctccttt
ctccctctacctccactcctacttttatagcccagactcacttatacaca
tggtaatcctcctgcttcaacctgtggattactgggatatggtactatga
caacacatataccaaaaatcggaaggacagagtagtgtgagcctgcctat
ctcttccttggcccctgtgcatctttcagagtcgtcccctgaacagagaa
gcagctgagaaagtccagccgaaggatgctcggcacattggtgcatcaac
ggtgtatagattgctaatgggaagatgaaccaaaacatggccacgggatc
tctacatttgtgttcctggtgtgacagcttggcagccaacgtgatttggt
ttctgtcttgtttgtcaatttctaatcttagtgcttcccaggcggggaag
agcaggaactggcttgacaggatgaggaattcacaaagattccctcccat
ccccccgcaaggttgttccaatcatctccctcagagtttctgcttctcag
gcctctggtcttacgtggtctgtcaaaagaatcagttgggctttaacaat
ttttgcttcccactatttgtgggcctaatacttagtggggtggtgaatgc
tcaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_69192916_69194036
seq2: B6Ng01-071G01.b_46_1167 (reverse)

seq1  CCATAAGTAAATCCAACACAGAGAGAGATTGAAGACACCTA--GCATCAA  48
      ||||||||||   ||||||||||   ||| |||||| ||||  |||||||
seq2  CCATAAGTAA--TCAACACAGAGGAGGATGGAAGAC-CCTAGCGCATCAA  47

seq1  -CCTCTAACCTCC--ACATATGTGCATGCACACATACAA-ATGTGCACA-  93
       ||||||||||||  ||||||||||||||||||| ||||  ||| |||| 
seq2  CCCTCTAACCTCCCAACATATGTGCATGCACACAAACAATGTGTCCACAC  97

seq1  CACAAATACTACA-CATTCACACTTATAAAAAAATTTAAAAAGAATGAGC  142
      ||||||||| ||| ||||||||||||| ||||||||||||||||||||||
seq2  CACAAATAC-ACACCATTCACACTTAT-AAAAAATTTAAAAAGAATGAGC  145

seq1  TAATGTCAATTTAGGAAGATCAATAATAGTCATGGCTGAAGCCCTATATC  192
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  TAATGTCAATTTA-GAAGATCAAT-ATAGTCATGGCTGAAGCCCTATATC  193

seq1  CTAGGATACTCCCAGGGTCAGAGTAGCAGGGCTTGTGTGGGCCTCCTATC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATACTCCCAGGGTCAGAGTAGCAGGGCTTGTGTGGGCCTCCTATC  243

seq1  TGCCTCTCTCTAAAAAGAGAATATCAGTCAAACCCTGTTTACATATCCAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCTCTAAAAAGAGAATATCAGTCAAACCCTGTTTACATATCCAT  293

seq1  GCATACACAGGCATCCTCTGTGCCTGCAGGCTGCTGCAGAAAATGACGGG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACAGGCATCCTCTGTGCCTGCAGGCTGCTGCAGAAAATGACGGG  343

seq1  ATCGGCCCCTGAACTCGTGATGACCAGAGGATACTGCGTCTTCTGTCTGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGCCCCTGAACTCGTGATGACCAGAGGATACTGCGTCTTCTGTCTGC  393

seq1  ATTCAATGTTTGCAGTTAGAGACCTTCCCATCCTGTTCAGAGCCCGTGTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGTTTGCAGTTAGAGACCTTCCCATCCTGTTCAGAGCCCGTGTG  443

seq1  ATATTCTTGAGAAATCACCATTAGGTTTGGAGTAAACCTCACCATGCCAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTGAGAAATCACCATTAGGTTTGGAGTAAACCTCACCATGCCAA  493

seq1  GAGAGGGGAGCCCAGGACAGAGGGCTACGTTGATTTCATTACTGCAGCAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGGAGCCCAGGACAGAGGGCTACGTTGATTTCATTACTGCAGCAC  543

seq1  ATGGGGAAGGGAATGAAATCACACTGCTGTTGTAATTTATTCTCTTCATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAAGGGAATGAAATCACACTGCTGTTGTAATTTATTCTCTTCATT  593

seq1  AAAATAGAAAAGCATTCGACAAGCCATAAAATTCCCATCTGCACTCCCGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAAAGCATTCGACAAGCCATAAAATTCCCATCTGCACTCCCGG  643

seq1  CAGGCCCTCGCCATCTGAAACACACATGTCTTCCCTCCGTGCTTTGAAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCTCGCCATCTGAAACACACATGTCTTCCCTCCGTGCTTTGAAAA  693

seq1  CCCAGAGGACAGAAACATTTAGTATCAGGGGTTGGCAGGATACTAATATT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGACAGAAACATTTAGTATCAGGGGTTGGCAGGATACTAATATT  743

seq1  TAAGTTTGAAAAGCACTGGGCGCTCTAGTCTGCTCCTTGAAGGGCTGCAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGAAAAGCACTGGGCGCTCTAGTCTGCTCCTTGAAGGGCTGCAT  793

seq1  CCTTTAGCGAGTGATTGCTGGTCTAGATTTAAATGTCACAGAGGACAAGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGCGAGTGATTGCTGGTCTAGATTTAAATGTCACAGAGGACAAGG  843

seq1  ATCTGGGTCGGGGACCTCCCGCAGTACAGCAGGGGAGAGTGAATGGATGG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGTCGGGGACCTCCCGCAGTACAGCAGGGGAGAGTGAATGGATGG  893

seq1  ACCCGCAGCCTGTAATTGATGAGGCTTCTGCCACCTCACAAAGTAGTGGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCAGCCTGTAATTGATGAGGCTTCTGCCACCTCACAAAGTAGTGGA  943

seq1  AACATTGCAAGGTGAAACAATGTTCCACCTTGGAAAAGAAACAAAGGGCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGCAAGGTGAAACAATGTTCCACCTTGGAAAAGAAACAAAGGGCT  993

seq1  TTTCACCGTATAGAAATGAAAATTCCTAAACCCTGGCACACAGTGATTCC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCGTATAGAAATGAAAATTCCTAAACCCTGGCACACAGTGATTCC  1043

seq1  TACAGCCCAAAGGACAGAAGCTTTTAAGAATCACCACCTAAGGTGTGTAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCCAAAGGACAGAAGCTTTTAAGAATCACCACCTAAGGTGTGTAA  1093

seq1  ACTCTCGCAGCCCAGTCCAGGAAGAATTC  1121
      |||||||||||||||||||||||||||||
seq2  ACTCTCGCAGCCCAGTCCAGGAAGAATTC  1122

seq1: chr10_68972449_68973538
seq2: B6Ng01-071G01.g_67_1173

seq1  GAATTCAGCGTCTCAGGAGACCATGGAAATTCTGTATCCCGTGGAGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCGTCTCAGGAGACCATGGAAATTCTGTATCCCGTGGAGCTTA  50

seq1  GCTGCAGGCTGAGTTTTGAGGGCCATGCAGGATGCTTTCTCTTTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGCTGAGTTTTGAGGGCCATGCAGGATGCTTTCTCTTTCTCTCT  100

seq1  TTTCCTGGTGGTTCATGTTTCCCATACTGCCCGCACACTCACTGTGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGTGGTTCATGTTTCCCATACTGCCCGCACACTCACTGTGCAGC  150

seq1  AGAGGACGATCCTCCTGCATCTGCCTCCCAAATGCTGCCGTTACAGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACGATCCTCCTGCATCTGCCTCCCAAATGCTGCCGTTACAGGGGT  200

seq1  GTGTGCTTTATATGGTATTGGGTACTGAGCCTAGGGCTTCATGCATGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTTTATATGGTATTGGGTACTGAGCCTAGGGCTTCATGCATGGAT  250

seq1  ACAAATATTCTACTGAGTCACAGCATCAACACTGTGTAGGATTTCAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATTCTACTGAGTCACAGCATCAACACTGTGTAGGATTTCAGTGA  300

seq1  CAGAAATGACACTGGAGGAAAGGGTGGGTGTGGCAGTGGCAGAGATGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGACACTGGAGGAAAGGGTGGGTGTGGCAGTGGCAGAGATGGGG  350

seq1  AATGACATCATGTAATCTGGTGCCTCTGTCCTAAGCAGGGGTTTTTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACATCATGTAATCTGGTGCCTCTGTCCTAAGCAGGGGTTTTTCTCT  400

seq1  TTGTCTCTGTCTCTCTGTCTCTGTCTCTCCCTATCCTCCTCCCCTCCCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTGTCTCTCTGTCTCTGTCTCTCCCTATCCTCCTCCCCTCCCCG  450

seq1  TCTCTCCCCTCCCTCTTTCTCTCCCTCTTTCCCCCTTCCCACTCTCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCTCCCTCTTTCTCTCCCTCTTTCCCCCTTCCCACTCTCCTTT  500

seq1  CTCCCTCTACCTCCACTCCTACTTTTATAGCCCAGACTCACTTATACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTACCTCCACTCCTACTTTTATAGCCCAGACTCACTTATACACA  550

seq1  TGGTAATCCTCCTGCTTCAACCTGTGGATTACTGGGATATGGTACTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATCCTCCTGCTTCAACCTGTGGATTACTGGGATATGGTACTATGA  600

seq1  CAACACATATACCAAAAATCGGAAGGACAGAGTAGTGTGAGCCTGCCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACATATACCAAAAATCGGAAGGACAGAGTAGTGTGAGCCTGCCTAT  650

seq1  CTCTTCCTTGGCCCCTGTGCATCTTTCAGAGTCGTCCCCTGAACAGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTTGGCCCCTGTGCATCTTTCAGAGTCGTCCCCTGAACAGAGAA  700

seq1  GCAGCTGAGAAAGTCCAGCCGAAGGATGCTCGGCACATTGGTGCATCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGAGAAAGTCCAGCCGAAGGATGCTCGGCACATTGGTGCATCAAC  750

seq1  GGTGTATAGATTGCTAATGGGAAGATGAACC-AAACATGGCCACGGGATC  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGTGTATAGATTGCTAATGGGAAGATGAACCAAAACATGGCCACGGGATC  800

seq1  TCTACA-TTGTGTTCCTGGTGTGACAGCTTGGCAGCCAACGTGATTTGGT  848
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTTGTGTTCCTGGTGTGACAGCTTGGCAGCCAACGTGATTTGGT  850

seq1  TTCTGTCTTGTTTGTC-ATTTCTAATCTTAGTGCTTCCCAGTCGGGGAAG  897
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TTCTGTCTTGTTTGTCAATTTCTAATCTTAGTGCTTCCCAGGCGGGGAAG  900

seq1  AGCAGGAACT-GCTTGACAGGAGGAGGAATTCACAAAGATTCCCTCCCA-  945
      |||||||||| ||||||||||| |||||||||||||||||||||||||| 
seq2  AGCAGGAACTGGCTTGACAGGATGAGGAATTCACAAAGATTCCCTCCCAT  950

seq1  CCCCCCGCAAGGTTGTTCCAGTCATCT-CCTCAGAGTTTCTGCTTCCCAG  994
      |||||||||||||||||||| |||||| |||||||||||||||||| |||
seq2  CCCCCCGCAAGGTTGTTCCAATCATCTCCCTCAGAGTTTCTGCTTCTCAG  1000

seq1  GCCCCTGGTC-TACGT-GTCTG-CAAAAGAA-CAGTTGG--CTTAACAAT  1038
      ||| |||||| ||||| ||||| |||||||| |||||||   ||||||||
seq2  GCCTCTGGTCTTACGTGGTCTGTCAAAAGAATCAGTTGGGCTTTAACAAT  1050

seq1  TTTGTCTTCCCACATTTTGGGGGC--TATCTTTAGT-GGGTGG-GAATGC  1084
      |||  ||||||||  |||| ||||   ||  ||||| |||||| ||||||
seq2  TTTTGCTTCCCACTATTTGTGGGCCTAATACTTAGTGGGGTGGTGAATGC  1100

seq1  T-AAAAT  1090
      | |||||
seq2  TCAAAAT  1107