BAC Information

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BAC

Clone NameB6Ng01-071L12
Chromosome10 (Build37)
Map Location 103,104,923 - 103,106,027
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071L12.bB6Ng01-071L12.g
ACCDH889340DH889341
length1,2681,102
definitionDH889340|Mus musculus domesticus DNA, BAC clone: B6Ng01-071L12, 5' end.DH889341|Mus musculus domesticus DNA, BAC clone: B6Ng01-071L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaatgtcgaatggctgagaagcacctaaaaaatgt
tcaacatccttaattatcagggaaatgcaaatcaaaacaaacctgagttt
ccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagca
gatgctaccaagatgtggagaaagaggaacactcctccattgctggtggg
atttcaagttggtacaaccactctggaaatcagtttggtggttcctcaga
aaattggacataattctactggaagatccagcaataccactcctgggcat
atacacaaaaaatgctccaacttgtaataaggatacatgctccactatgt
tcatatcagcctttatactatcaagaagctggaaagaacccagatgtccc
tcaacataagaatggatgcagaaaatgtggtatatttatacaatggaata
ctactaagccattattttttattattaattttttacagtcctctcattac
ttccacccccacttctacccctacccccacttccaccaagccctcccact
ccctagggcctcaagtccacaccttggccttccttcttcttgagcttcat
atggtctgtcagttgcattgttggtattccaagcttttttcctaatatcc
actatcagtgagtacataccatgtgtgttcttttgtgactgaggtaaccc
agtaacaaagggacatcatactgttatgatgcacacattttcaaaactca
gagttgcaacttctgcaccgatatgtcaaacctgctgttttattccatat
tgcattgacaaaccatttctcaaactgtagactactttaggcaatcttta
taacttatatttgtttttaatatcttcttctattgactgcagctagagtg
catgtggttctcagctgcagatatggcgaggctctagtgaatggactgca
ttaaagacagtacgtaaggaagcttcattctgaagtgcagaatggtatgc
gtggagcattttttctaggttcagagtctggtgttgtttactagcagtta
cctattccgctatggtgtacccagaaaaccatgccaggagttcaggaaaa
ctcttagagtattgttatcccacctaagaccaaattattttactccaagt
tcaaaacaagaaagaaatcggatgaacctcaaacgaaaatcctataacct
tcatcagtatggccttaatggtctttagcctgctgcttacgttctccggt
tcgttcctttggaccgtc

gaattcatgtgacccccaatactttccaaatgagttcgtgctgtaagttg
agcatcaaattctatgatgctaaatttatcttttactctttgatctttta
cttgtaagtcacatcaaatacgggactccttatgcatcttgggtactatt
gaaaacaaggtaattgctttaatggggcttttcagttggtttctatgtta
gagaattgacaaaatataaacaaaacagaaacagcaccaagagattgaat
tactgaataagacattatccttgaaagcatgaggacaaaagttgggatgc
tagcatgtcccataaatgtcacattgcccaaacacattagtgtttcagag
acatacacaagggatccccatatcaaactggctagttgaatcagtgagct
ttgggtaacagattgaggcctggcctcattatatgaagtaaggatgataa
aagatgtctgatttcaatctctggcttccacatatatgcatacatatatg
tccatatacatatacacagatacgtgcataatacaacatgtatacttaca
gaactaagaaaaaatgtacaatattacaaaaaatcgatatcttacaatga
caagcttttgttttttctttgtttctttagatattttccccatttacatt
tcaaatgctatcccccaaagccctctataccctcccccctccctgctccc
caacccacaagctttcttaacaaaaagagctaaaaaaatgagaaactagt
tcctataactgtgaataaacccaatgagaatctaataaagctgagaaaaa
gttaaaaccacctggataaatacacatatctacacatacatatgccattg
tatgtatatgttcagataaacatgtgtaaacacatatttctatatattaa
tatatagtatatataagctacttgtttttagttgataaatgatttagaat
aatcagaactgaagtaacagcaaaccaatcaatgagatgttttgggcaac
ctgttggtcctttcattttatatatactatttaaatattaaacatgacat
agattatggtaatgattatgataaaatatcataaatttaataaatcctca
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103104923_103106027
seq2: B6Ng01-071L12.g_65_1166

seq1  GAATTCATGTGACCCCCAATACTTTCCAAATGAGTTCGTGCTGTAAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGACCCCCAATACTTTCCAAATGAGTTCGTGCTGTAAGTTG  50

seq1  AGCATCAAATTCTATGATGCTAAATTTATCTTTTACTCTTTGATCTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAAATTCTATGATGCTAAATTTATCTTTTACTCTTTGATCTTTTA  100

seq1  CTTGTAAGTCACATCAAATACGGGACTCCTTATGCATCTTGGGTACTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAGTCACATCAAATACGGGACTCCTTATGCATCTTGGGTACTATT  150

seq1  GAAAACAAGGTAATTGCTTTAATGGGGCTTTTCAGTTGGTTTCTATGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAGGTAATTGCTTTAATGGGGCTTTTCAGTTGGTTTCTATGTTA  200

seq1  GAGAATTGACAAAATATAAACAAAACAGAAACAGCACCAAGAGATTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGACAAAATATAAACAAAACAGAAACAGCACCAAGAGATTGAAT  250

seq1  TACTGAATAAGACATTATCCTTGAAAGCATGAGGACAAAAGTTGGGATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAATAAGACATTATCCTTGAAAGCATGAGGACAAAAGTTGGGATGC  300

seq1  TAGCATGTCCCATAAATGTCACATTGCCCAAACACATTAGTGTTTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGTCCCATAAATGTCACATTGCCCAAACACATTAGTGTTTCAGAG  350

seq1  ACATACACAAGGGATCCCCATATCAAACTGGCTAGTTGAATCAGTGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACAAGGGATCCCCATATCAAACTGGCTAGTTGAATCAGTGAGCT  400

seq1  TTGGGTAACAGATTGAGGCCTGGCCTCATTATATGAAGTAAGGATGATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTAACAGATTGAGGCCTGGCCTCATTATATGAAGTAAGGATGATAA  450

seq1  AAGATGTCTGATTTCAATCTCTGGCTTCCACATATATGCATACATATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCTGATTTCAATCTCTGGCTTCCACATATATGCATACATATATG  500

seq1  TCCATATACATATACACAGATACGTGCATAATACAACATGTATACTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATACATATACACAGATACGTGCATAATACAACATGTATACTTACA  550

seq1  GAACTAAGAAAAAATGTACAATATTACAAAAAATCGATATCTTACAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAGAAAAAATGTACAATATTACAAAAAATCGATATCTTACAATGA  600

seq1  CAAGCTTTTGTTTTTTCTTTGTTTCTTTAGATATTTTCCCCATTTACATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTTTGTTTTTTCTTTGTTTCTTTAGATATTTTCCCCATTTACATT  650

seq1  TCAAATGCTATCCCCCAAAGCCCTCTATACCCTCCCCCCTCCCTGCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTATCCCCCAAAGCCCTCTATACCCTCCCCCCTCCCTGCTCCC  700

seq1  CAACCCACAAGCTTTCTTAACAAAAAGAGCTAAAAAAATGAGAAACTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACAAGCTTTCTTAACAAAAAGAGCTAAAAAAATGAGAAACTAGT  750

seq1  TCCTATAACTGTGAATAAACCCAATGAGAATCTAATAAAGCTGAGAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAACTGTGAATAAACCCAATGAGAATCTAATAAAGCTGAGAAAAA  800

seq1  GTTAAAACCACCTGGATAAATACACATATCTACACATACATATGCCATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAACCACCTGGATAAATACACATATCTACACATACATATGCCATTG  850

seq1  TATGTATATGTTCAGATAAACATGTGTAAACACATATTTCTATATATTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATGTTCAGATAAACATGTGTAAACACATATTTCTATATATTAA  900

seq1  TATATAGTATATATAAGCTACTTGTTTTTAGTTGATAAATGATTTAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTATATATAAGCTACTTGTTTTTAGTTGATAAATGATTTAGAAT  950

seq1  AATCAGAACTGAAGTAACAGCAAACCAATCAATGAAGATGTTTTGGGCAA  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATCAGAACTGAAGTAACAGCAAACCAATCAATG-AGATGTTTTGGGCAA  999

seq1  CCTGTTGGTCCTTTCATTTTATATAATACTATTTAAATATTAAACATGAC  1050
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCTGTTGGTCCTTTCATTTTATAT-ATACTATTTAAATATTAAACATGAC  1048

seq1  ATAGATTATGGTAATGATTATGATAAAATATCATAAATTTAATAAAATCC  1100
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATAGATTATGGTAATGATTATGATAAAATATCATAAATTTAAT-AAATCC  1097

seq1  TCAAA  1105
      |||||
seq2  TCAAA  1102


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