BAC Information

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BAC

Clone NameB6Ng01-071N23
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,472 - 104,054,36323,687,888 - 23,687,966
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071N23.bB6Ng01-071N23.g
ACCDH889445DH889446
length1,03179
definitionDH889445|Mus musculus domesticus DNA, BAC clone: B6Ng01-071N23, 5' end.DH889446|Mus musculus domesticus DNA, BAC clone: B6Ng01-071N23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,472 - 104,054,363)(23,687,888 - 23,687,966)
sequence
gaattctcaactgaggaataccgaagggccgagaaacacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagt
ttccaccttacaccagtcagaatagctaagatcaaaaattcagatgacag
tagatgctggcagggatgtggagaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctgctggttcctca
gaaaactggacatagtactacaggaggatccagcaatacctctcctgggc
atataccagaagatgttccaacttgtaataagaacacatgttccactatg
ctcataacagtcttatttataatagccagaagctggaaaacccagatgtc
cctcaacagaggaatgaattcagaaaatgtggtacatttacacaatggag
tactactcagcaattaaaaacaatgaatttttgaaattcttaggcaaatg
gatgtatttggaagatatcatcctgagtgaggtaacacaatcacaaaaga
acacacatggtatgcactcactgataagtggatattagctcagaaactta
gaatacccaggatacaatttgcaaaacacatgaaactcaagaagaaggaa
gaccaaattgtggatactttgttcctattttttacaatcttattgcctca
agatctatagtttcagaataagggtggcgagtccagtttagagcatagta
ttcttaccatcagagcagagagtctctgactgtggttgagaaatacacat
gaaagaagtgagagagcccaagctgacaagacagtgctggtgatggatgc
aatagattctgaaagctttctcttcaccttgtcagttatagatggtagcg
atcatcttccctctaaccctcagttccacatcccatccttccacagcatc
aaaagcatcactttctagagcccacagaaatgaatctcttcttgacaaag
cagcgtttgaaactttgtggtcacatggtct
aaggtcatgtttaactagttaatttaagagcaacctgaggtacttggaga
gagggagagagagatggggggggggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053472_104054363
seq2: B6Ng01-071N23.b_46_716 (reverse)

seq1  CAAAGTGTCCACACTTTGGTCTTCGTTC-TCTTGAGTTTAATGTGTTTAG  49
      |||||| |||||| |||||||||| ||| |||||||||| |||||||| |
seq2  CAAAGTATCCACAATTTGGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTG  50

seq1  CAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCTAATATCCA  99
      |||||||       |||| ||||||| ||||||||||| |||||||||||
seq2  CAAATTG-------TATCCTGGGTATTCTAAGTTTCTGAGCTAATATCCA  93

seq1  CTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTGGGTTACCGC  149
      ||||||||||||| ||||    | | |||| |||||||||| |||||| |
seq2  CTTATCAGTGAGTGCATACCATGTGTGTTCTTTTGTGATTGTGTTACCTC  143

seq1  ACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGAATTTCATAA  199
      |||||||||||||   ||||  | |||||||||||||| |||||||| ||
seq2  ACTCAGGATGATATCTTCCAAATACATCCATTTGCCTAAGAATTTCAAAA  193

seq1  ATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATTAATGTAATT  249
      ||||||| |||||||| ||                               
seq2  ATTCATTGTTTTTAATTGC-------------------------------  212

seq1  ACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAATTGATAAAT  299
                                                        
seq2  --------------------------------------------------  212

seq1  TAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAATTTAATAAT  349
                                                        
seq2  --------------------------------------------------  212

seq1  AAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAATAATTTAAT  399
                                       | ||||           
seq2  ---------------------------------TGAGTA-----------  218

seq1  TAATGTAATTTAATTAATGTAATTACATTACATTTAATAGCTCCATTGTG  449
                        |||                   ||||||||||
seq2  ------------------GTA-------------------CTCCATTGTG  231

seq1  TAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCTGGG  499
      |||||||||||||||||||| ||  |||||||||||||||| ||||||||
seq2  TAAATGTACCACATTTTCTGAATTCATTCCTCTGTTGAGGGACATCTGGG  281

seq1  TTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATAGTGG  549
      |  ||||||||| |||||||||||||||||| ||| |||||  |||||||
seq2  T--TTTCCAGCTTCTGGCTATTATAAATAAGACTGTTATGAGCATAGTGG  329

seq1  AGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCCAGA  599
      | ||||||| ||| ||||  |||||  |||||||||| ||||||||||| 
seq2  AACATGTGTTCTTATTACAAGTTGGAACATCTTCTGG-TATATGCCCAGG  378

seq1  AGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGACGAA  649
      ||||||||||||||||||||| ||||||||||||||| |||||||| |||
seq2  AGAGGTATTGCTGGATCCTCCTGTAGTACTATGTCCAGTTTTCTGAGGAA  428

seq1  CCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAAC  699
      ||  ||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAAC  478

seq1  AATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCA  749
      |||||||||||||||||| ||||||||||||  |||||||||| ||||||
seq2  AATGGAGGAGTGTTCCTC-TTCTCCACATCCCTGCCAGCATCTACTGTCA  527

seq1  CCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAG  799
       ||||||||||||||||||| |||||||||||||| |||||||| |||||
seq2  TCTGAATTTTTGATCTTAGCTATTCTGACTGGTGTAAGGTGGAAACTCAG  577

seq1  GGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACA-TTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTT  627

seq1  TTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  892
      |||||||| ||||| ||| ||||||||||||||| |||||||||
seq2  TTCAGGTGTTTCTCGGCCCTTCGGTATTCCTCAGTTGAGAATTC  671

seq1: chr1_23687888_23687966
seq2: B6Ng01-071N23.g_74_152

seq1  AAGGTCATGTTTAACTAGTTAATTTAAGAGCAACCTGAGGTACTTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATGTTTAACTAGTTAATTTAAGAGCAACCTGAGGTACTTGGAGA  50

seq1  GAGGGAGAGAGAGATGGGGGGGGGGAGAA  79
      |||||||||||||||||||||||||||||
seq2  GAGGGAGAGAGAGATGGGGGGGGGGAGAA  79