BAC Information

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BAC

Clone NameB6Ng01-072L21
Chromosome10 (Build37)
Map Location 92,569,157 - 92,685,768
singlet/doubletdoublet
Overlap geneEG667314, Pctk2
Upstream geneLOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
Downstream geneElk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072L21.bB6Ng01-072L21.g
ACCDH890072DH890073
length1,1661,006
definitionDH890072|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L21, 5' end.DH890073|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,569,157 - 92,570,329)(92,684,753 - 92,685,768)
sequence
gaattcttaccagaatattcccctgtgtaaaacagaattagagattccaa
ctttttctttaatttatgaacttaaatatgacactccttccttaaaagtt
tggaaagctctctgaaaaatcacccaatgtgagtgtcttttggcacagaa
atatttttttctgatttttaaaaaaatcagttactgaattattcaaatta
actacttagtgaaatttttcattcatttctactctcttctctaaaaaagt
atccattttattttccaaagatttttgaaaagttgtgcatagtatcctct
tttaactttgtcacttgcctatctatctacctacctatctatctatctat
ctatctatctatctatctatctatctatctatctatctatcttagagagg
gtctcccaagttggcctggaagtcactatgtagctgaggataactttgaa
cccccgattctcttccctctacattcagagtgctggattaaaggcatata
ccaccatagttggctttttatcagttttgctttgttgatttggtttgcac
atcaggcaaacactctaccactgagctccatccactgtcctgtttcattt
ttgaaagttttcttcaaacctgtaaatggatgtcctagcacaggttgagc
actgcctatataaaatcacttcttccccatgactaatgggccaaaggtga
ctcatttgaattagttacacagacacacacacacacatacacacatacac
acaacaccacacacacacacacacacacacacaccgcctttatctcaaaa
gaacaaaacatttagaaatatagatgacatcatgcatttatattttttcc
tccagattaaaattttgactcgcattaaaatttgggttatttttatttat
ttatttaagttttagtttttaagacaggatttctctgagtagccctgggt
tgtactagaaaagcaggatctttagaccaggctggcctcaaacttcacag
aaatccacctgcctctacctcccagcggtggaataaagatgtgcaccacc
accacccttatagttgctccattaaaaggcacagaggtcaagaaaaactt
tggctactttggatgttatctgttggactacaatatccctcatactagcc
agaggtcttgcatagt
gaattcagcatacatacatacatacatatatatatatatatatatacaca
tatatattcttttaagtaatagcggtcatttcagagtcaggtatatactc
ttttaggcaatagcagtcatttcagaattcggtatatagtcttttaggta
atagtggtcatctcaaaattcagtatatagtctgttaggtaatagtcatt
tcagagacaggtatataatcttttaggtaatagtggtcattgtagaattc
agtatatatatatattcttttaagtaatagcggtcatttcagagtcaggt
gtatattcttttaggtaatagcagtcatttcagaattcggtaaataatct
cttaggtaatagtggtcattgcaaaatttggtatattatattttaggtaa
cagcggtcatttcagaatttggtatataatctcttaggtaatagcggtta
tctcagaattcagtatatactcttttaggtaatagcagtcatctcaaaat
tcggtatatagtctgttaggtaatagtcatttcagagacaggtatataat
cttttaggtaatagtggtcattgcagaattcagtatatatatatatatat
atatatatatatatatatatatatacttttaagtatatatatatatatac
ttttaagtaatagcggtcttttcagagtcaggtatatactcttttatgta
atagcggtcatttcagaattcggtaaataatctcttaagtaatagtggtc
attgcagaatttggtatatcatattttagtaacagcggtcatttcagaat
ttggtatataatctcttagtaatagtgttatctcagaattcagtatatac
tcttttagtaatagcagtcatctcaaaattcggtatatagtctgttaggt
attgtcatctcagagacacgtatataatctttaggtaatagtggtcatgc
taattcagtaaatatatactcatcttctagtaaaagcggtacatttcaag
tcaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_92569157_92570329
seq2: B6Ng01-072L21.b_42_1207

seq1  GAATTCTTACCAGAATATTCCCCTGTGTAAAACAGAATTAGAGATTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCAGAATATTCCCCTGTGTAAAACAGAATTAGAGATTCCAA  50

seq1  CTTTTTCTTTAATTTATGAACTTAAATATGACACTCCTTCCTTAAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTTAATTTATGAACTTAAATATGACACTCCTTCCTTAAAAGTT  100

seq1  TGGAAAGCTCTCTGAAAAATCACCCAATGTGAGTGTCTTTTGGCACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGCTCTCTGAAAAATCACCCAATGTGAGTGTCTTTTGGCACAGAA  150

seq1  ATATTTTTTTCTGATTTTTAAAAAAATCAGTTACTGAATTATTCAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTTCTGATTTTTAAAAAAATCAGTTACTGAATTATTCAAATTA  200

seq1  ACTACTTAGTGAAATTTTTCATTCATTTCTACTCTCTTCTCTAAAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTAGTGAAATTTTTCATTCATTTCTACTCTCTTCTCTAAAAAAGT  250

seq1  ATCCATTTTATTTTCCAAAGATTTTTGAAAAGTTGTGCATAGTATCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTTATTTTCCAAAGATTTTTGAAAAGTTGTGCATAGTATCCTCT  300

seq1  TTTAACTTTGTCACTTGCCTATCTATCTACCTACCTATCTATCTATCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTTGTCACTTGCCTATCTATCTACCTACCTATCTATCTATCTAT  350

seq1  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTAGAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTAGAGAGG  400

seq1  GTCTCCCAAGTTGGCCTGGAAGTCACTATGTAGCTGAGGATAACTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCAAGTTGGCCTGGAAGTCACTATGTAGCTGAGGATAACTTTGAA  450

seq1  CCCCCGATTCTCTTCCCTCTACATTCAGAGTGCTGGATTAAAGGCATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGATTCTCTTCCCTCTACATTCAGAGTGCTGGATTAAAGGCATATA  500

seq1  CCACCATAGTTGGCTTTTTATCAGTTTTGCTTTGTTGATTTGGTTTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATAGTTGGCTTTTTATCAGTTTTGCTTTGTTGATTTGGTTTGCAC  550

seq1  ATCAGGCAAACACTCTACCACTGAGCTCCATCCACTGTCCTGTTTCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCAAACACTCTACCACTGAGCTCCATCCACTGTCCTGTTTCATTT  600

seq1  TTGAAAGTTTTCTTCAAACCTGTAAATGGATGTCCTAGCACAGGTTGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGTTTTCTTCAAACCTGTAAATGGATGTCCTAGCACAGGTTGAGC  650

seq1  ACTGCCTATATAAAATCACTTCTTCCCCATGACTAATGGGCCAAAGGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTATATAAAATCACTTCTTCCCCATGACTAATGGGCCAAAGGTGA  700

seq1  CTCATTTGAATTAGTTACACAGACACACACACACACATACACACATACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGAATTAGTTACACAGACACACACACACACATACACACATACAC  750

seq1  ACAACACCACACACACACACACACACACACACACCGCCTTTATCTCAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACCACACACACACACACACACACACACACCGCCTTTATCTCAAAA  800

seq1  GAACAAAACATTTAGAAATATAGATGACATCATGCATTTATATTTTTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAACATTTAGAAATATAGATGACATCATGCATTTATATTTTTTCC  850

seq1  TCCAGATTAAAATTTTGACTCGCATTAAAATTTGGGTTATTTTTATTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATTAAAATTTTGACTCGCATTAAAATTTGGGTTATTTTTATTTAT  900

seq1  TTATTTAAGTTTTAGTTTTTAAGACAGGATTTCTCTGAGTAGCCCT-GGT  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTATTTAAGTTTTAGTTTTTAAGACAGGATTTCTCTGAGTAGCCCTGGGT  950

seq1  TGTACTAGAATAGCCAGGAATCTTTAGACCAGGCTGGCCTCAAAC-TCAC  998
      |||||||||| || |||| |||||||||||||||||||||||||| ||||
seq2  TGTACTAGAAAAG-CAGG-ATCTTTAGACCAGGCTGGCCTCAAACTTCAC  998

seq1  AGAAATCCACCTGCCTCTACCTCCCAAGCGTTGGAATTAAAGATGTGCAC  1048
      ||||||||||||||||||||||||| |||| ||||| |||||||||||||
seq2  AGAAATCCACCTGCCTCTACCTCCC-AGCGGTGGAA-TAAAGATGTGCAC  1046

seq1  CACCACCACCCTTATAGGTTGCTTCATTTAAAAGGCACAGAGGTCAAAGA  1098
      |||||||||||||||| |||||| || ||||||||||||||||||||  |
seq2  CACCACCACCCTTATA-GTTGCTCCA-TTAAAAGGCACAGAGGTCAAGAA  1094

seq1  AAACTTTGGCTACTTT-GATGTTTATCCTGTTGGACTACATTTATCCCTC  1147
      |||||||||||||||| |||| |||| |||||||||||||  ||||||||
seq2  AAACTTTGGCTACTTTGGATG-TTAT-CTGTTGGACTACA-ATATCCCTC  1141

seq1  ATACCTAGCCAGATGTCTTGCATAGT  1173
      ||| ||||||||| ||||||||||||
seq2  ATA-CTAGCCAGAGGTCTTGCATAGT  1166

seq1: chr10_92684753_92685768
seq2: B6Ng01-072L21.g_66_1071 (reverse)

seq1  ACCTGACTCTGAAATG-ACCGCTATTACTTAAAAGAATGAATATATATAT  49
      |||||||| ||||||| |||||| |||| || ||| |||| ||||||| |
seq2  ACCTGACT-TGAAATGTACCGCTTTTAC-TAGAAG-ATGAGTATATATTT  47

seq1  ACTGAATTTTGCAATGACCACTATTACCTAAAAGATTATATACCTGTCTC  99
      |||||| || || |||||||||||||||| ||||||||||||| ||||||
seq2  ACTGAA-TTAGC-ATGACCACTATTACCT-AAAGATTATATACGTGTCTC  94

seq1  TGAAATGACAATTACCTAACAGACTATATACCGAATTTTGAGATGACTGC  149
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGACAA-TACCTAACAGACTATATACCGAATTTTGAGATGACTGC  143

seq1  TATTACCTAAAAGAGTATATACTGAATTCTGAGATAACCACTATTACCTA  199
      ||||| ||||||||||||||||||||||||||||||| |||||||| |||
seq2  TATTA-CTAAAAGAGTATATACTGAATTCTGAGATAA-CACTATTA-CTA  190

seq1  AGAGATTATATACCAAATTCTGAAATGACCGCTGTTACCTAAAATATGAT  249
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAGATTATATACCAAATTCTGAAATGACCGCTGTTA-CTAAAATATGAT  239

seq1  ATACCAAATTCTGCAATGACCACTATTACCTAAGAGATTATTTACCGAAT  299
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATACCAAATTCTGCAATGACCACTATTACTTAAGAGATTATTTACCGAAT  289

seq1  TCTGAAATGACCGCTATTACCTAAAAGAGTATATACCTGACTCTGAAATG  349
      |||||||||||||||||||| ||||||||||||||||||||||||||| |
seq2  TCTGAAATGACCGCTATTACATAAAAGAGTATATACCTGACTCTGAAAAG  339

seq1  ACCGCTATTACTTAAAAGTATATATATATATATACTTAAAAGTATATATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTATTACTTAAAAGTATATATATATATATACTTAAAAGTATATATA  389

seq1  TATATATATATATATATATATATATATATATATACTGAATTCTGCAATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATACTGAATTCTGCAATGA  439

seq1  CCACTATTACCTAAAAGATTATATACCTGTCTCTGAAATGACTATTACCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATTACCTAAAAGATTATATACCTGTCTCTGAAATGACTATTACCT  489

seq1  AACAGACTATATACCGAATTTTGAGATGACTGCTATTACCTAAAAGAGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTATATACCGAATTTTGAGATGACTGCTATTACCTAAAAGAGTA  539

seq1  TATACTGAATTCTGAGATAACCGCTATTACCTAAGAGATTATATACCAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGAATTCTGAGATAACCGCTATTACCTAAGAGATTATATACCAAA  589

seq1  TTCTGAAATGACCGCTGTTACCTAAAATATAATATACCAAATTTTGCAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAATGACCGCTGTTACCTAAAATATAATATACCAAATTTTGCAAT  639

seq1  GACCACTATTACCTAAGAGATTATTTACCGAATTCTGAAATGACTGCTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTATTACCTAAGAGATTATTTACCGAATTCTGAAATGACTGCTAT  689

seq1  TACCTAAAAGAATATACACCTGACTCTGAAATGACCGCTATTACTTAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAAAGAATATACACCTGACTCTGAAATGACCGCTATTACTTAAAA  739

seq1  GAATATATATATATACTGAATTCTACAATGACCACTATTACCTAAAAGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATATATATACTGAATTCTACAATGACCACTATTACCTAAAAGAT  789

seq1  TATATACCTGTCTCTGAAATGACTATTACCTAACAGACTATATACTGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACCTGTCTCTGAAATGACTATTACCTAACAGACTATATACTGAAT  839

seq1  TTTGAGATGACCACTATTACCTAAAAGACTATATACCGAATTCTGAAATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATGACCACTATTACCTAAAAGACTATATACCGAATTCTGAAATG  889

seq1  ACTGCTATTGCCTAAAAGAGTATATACCTGACTCTGAAATGACCGCTATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTATTGCCTAAAAGAGTATATACCTGACTCTGAAATGACCGCTATT  939

seq1  ACTTAAAAGAATATATATGTGTATATATATATATATATATATGTATGTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAAGAATATATATGTGTATATATATATATATATATATGTATGTAT  989

seq1  GTATGTATGCTGAATTC  1016
      |||||||||||||||||
seq2  GTATGTATGCTGAATTC  1006