BAC Information

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BAC

Clone NameB6Ng01-075A12
Chromosome10 (Build37)
Map Location 55,521,648 - 55,522,820
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382460, LOC100041927
Downstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075A12.bB6Ng01-075A12.g
ACCDH891709DH891710
length1,2451,158
definitionDH891709|Mus musculus domesticus DNA, BAC clone: B6Ng01-075A12, 5' end.DH891710|Mus musculus domesticus DNA, BAC clone: B6Ng01-075A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcaattctgagccccattttttaatggggttatttgatt
ttctggagtccaccctctttagttctttatatatgttgaatattagtccc
ctatctgatttagaataggtaaggatcctttcccaatctgttggtggtct
ttttgtcttattgacagtatcttttgcattgcagaagctttgcactttca
tgaggtcccatttgtagattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctatgcccatatcttcgaggcttttccccac
cttctcctctataagtttcagtgtctctggtcttatgtgaagatccttga
tccatgtagatttgaccttagtacaaggatgtaagaatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
ggccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcagtataccagtgccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcagggatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggtttttttgttattccagat
gaatttgcagattgctctttctagttcattgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgttcctgcaatccatgagcatgggagatctttctatctt
ctgagatcttctttaatttctttcttcagagacttaaatttcttatcata
cagatctctcactttccttagagtcacgccaagatattttatattattgt
tccctattgagaaaggtgttgttccctaattttctttctcagcctgttta
ttctttgtgtagagaaaggccattgacttgtttgagttaatttatatcca
gctacttccaccgaagcttgtttatcaggtttaggggttccctggtggga
tttttttaggggcacttatattactatctaatcatctgcaaaagtgattt
tgacttcctccttccatttgtatcctgaactccttgttgccgatggctcg
cctaggaacttcagaacacaagtgtggataatatgtgttaggata
gaattccctaacagtcttttaaggatcatataatatgaataaaggaataa
tttgactcaatctttcctacttgtgtaagcaccctccattcctatttgtg
tgtcttttatttatttttatattgctttacctaagactttgagcacttaa
tgattatgaatagagagaatgggaatctttcttttgttatgattttaaat
gaattgttttcagttttttctactggatttaaattatctttacaatgggt
ctttataggaatagttgtcttcaggatgttgtactcactggctcagcaac
tgttgttacctgctcaaaacctatacaagataaagccagtccacatgtca
acctgattagggaatatcatctcaatttgttggtattattgattgatttg
tttgataagcacacacatatatttttatgtactatcctagtttttatata
ttagaacccataatagcaccttgtcaatttcacctttgttcttcaacatg
ttaatttatgcaacataaaattgtattaaacttattttgtaggtgaagat
gttgagcaagagtgtttcagtaacttgcctaagagtcatgcaaataataa
tcattggaatttataccccttgctttccttgtaataataataatatactt
gccattttatcttgaaaattattaggcaatcaataacctttattctatga
tatatatctatattatacatgttacatatatttatatacatgaatttgtg
aaatgaattatgtatatgaaatataatctagcattgaacataggtaattt
actagtatgccatgttttcaaaaattcctagtaaaatggaagccagatac
attttcagttaaacatggtttgtctatcatactcaaacactacaagaaat
ttgtggtgactagcaattagttctcttgatcatttcactaaatcctgaga
ttcctgtgggaaaattgccatttctctagatagaaatgcacacatactat
cttgtcttcctggaaaattcttctttcactaaactgtcttaaagaaactg
ttgatgtgaccttataagggaattttgtgcaatcaggtatctgtttaccg
taaactttggagagatcaaggagccttccttgaacagagtttgtgttgat
aatgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_55521648_55522820
seq2: B6Ng01-075A12.g_69_1226 (reverse)

seq1  GCTGCATTAATCAAACACAAA-ACTGATCTTAGACAGC-CCTTGAAACTC  48
      |||||||| ||| ||||||||  ||| ||   ||  || ||||| | |||
seq2  GCTGCATT-ATC-AACACAAACTCTGTTCAAGGAAGGCTCCTTG-ATCTC  47

seq1  TTCAAAG-TTACTGTTAAAAACAGATACACTGAATGGCAACAAAAATTCC  97
      | ||||| |||| ||   |||||||||| ||| || |||   ||||||||
seq2  TCCAAAGTTTACGGT---AAACAGATAC-CTG-ATTGCA--CAAAATTCC  90

seq1  ACTATAAGACCACATCAACAGTGTCTTTTAAGAACAGTTTTAGTGAGAGA  147
        ||||||  |||||||||||| || |||||| |||| |||||||| |||
seq2  CTTATAAGGTCACATCAACAGTTTC-TTTAAG-ACAG-TTTAGTGAAAGA  137

seq1  AGATATTTCCAGGAAAGACAAGATAGTATGTGTGCATTTCTATCTAGAAG  197
      |||  |||||||| ||||||||||||||||||||||||||||||||| ||
seq2  AGAATTTTCCAGG-AAGACAAGATAGTATGTGTGCATTTCTATCTAG-AG  185

seq1  AAATGGCAATTTTTCCCCACAGGAATCTTCAGGATTTAGTGAAATGATCA  247
      |||||||||||||  |||||||||||| ||||||||||||||||||||||
seq2  AAATGGCAATTTT--CCCACAGGAATC-TCAGGATTTAGTGAAATGATCA  232

seq1  AGAGAACTAAATTGCTAGTCACCACAAATTTCCTGTAGTGTTTGAGTATG  297
      |||||||| ||||||||||||||||||||||| |||||||||||||||||
seq2  AGAGAACT-AATTGCTAGTCACCACAAATTTCTTGTAGTGTTTGAGTATG  281

seq1  ATAGACAAACCATGTTTAACTGAAAATGTATCTGGCTTCCATTTTACTAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAAACCATGTTTAACTGAAAATGTATCTGGCTTCCATTTTACTAG  331

seq1  GAATTTTTGAAAACATGGCATACTAGTAAATTACCTATGTTCAATGCTAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTGAAAACATGGCATACTAGTAAATTACCTATGTTCAATGCTAG  381

seq1  ATTATATTTCATATACATAATTCATTTCACAAATTCATGTATAT-AATAT  446
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTATATTTCATATACATAATTCATTTCACAAATTCATGTATATAAATAT  431

seq1  ATGTAACATGTATAATATAGATATATATCATAGAATAAAGGTTATTGATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACATGTATAATATAGATATATATCATAGAATAAAGGTTATTGATT  481

seq1  GCCTAATAATTTTCAAGATAAAATGGCAAGTATATTATTATTATTACAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATAATTTTCAAGATAAAATGGCAAGTATATTATTATTATTACAAG  531

seq1  GAAAGCAAGGGGTATAAATTCCAATGATTATTATTTGCATGACTCTTAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAGGGGTATAAATTCCAATGATTATTATTTGCATGACTCTTAGG  581

seq1  CAAGTTACTGAAACACTCTTGCTCAACATCTTCACCTACAAAATAAGTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTACTGAAACACTCTTGCTCAACATCTTCACCTACAAAATAAGTTT  631

seq1  AATACAATTTTATGTTGCATAAATTAACATGTTGAAGAACAAAGGTGAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATTTTATGTTGCATAAATTAACATGTTGAAGAACAAAGGTGAAA  681

seq1  TTGACAAGGTGCTATTATGGGTTCTAATATATAAAAACTAGGATAGTACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGGTGCTATTATGGGTTCTAATATATAAAAACTAGGATAGTACA  731

seq1  TAAAAATATATGTGTGTGCTTATCAAACAAATCAATCAATAATACCAACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATATGTGTGTGCTTATCAAACAAATCAATCAATAATACCAACA  781

seq1  AATTGAGATGATATTCCCTAATCAGGTTGACATGTGGACTGGCTTTATCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGATGATATTCCCTAATCAGGTTGACATGTGGACTGGCTTTATCT  831

seq1  TGTATAGGTTTTGAGCAGGTAACAACAGTTGCTGAGCCAGTGAGTACAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGGTTTTGAGCAGGTAACAACAGTTGCTGAGCCAGTGAGTACAAC  881

seq1  ATCCTGAAGACAACTATTCCTATAAAGACCCATTGTAAAGATAATTTAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAGACAACTATTCCTATAAAGACCCATTGTAAAGATAATTTAAA  931

seq1  TCCAGTAGAAAAAACTGAAAACAATTCATTTAAAATCATAACAAAAGAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAGAAAAAACTGAAAACAATTCATTTAAAATCATAACAAAAGAAA  981

seq1  GATTCCCATTCTCTCTATTCATAATCATTAAGTGCTCAAAGTCTTAGGTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCATTCTCTCTATTCATAATCATTAAGTGCTCAAAGTCTTAGGTA  1031

seq1  AAGCAATATAAAAATAAATAAAAGACACACAAATAGGAATGGAGGGTGCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATATAAAAATAAATAAAAGACACACAAATAGGAATGGAGGGTGCT  1081

seq1  TACACAAGTAGGAAAGATTGAGTCAAATTATTCCTTTATTCATATTATAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAGTAGGAAAGATTGAGTCAAATTATTCCTTTATTCATATTATAT  1131

seq1  GATCCTTAAAAGACTGTTAGGGAATTC  1173
      |||||||||||||||||||||||||||
seq2  GATCCTTAAAAGACTGTTAGGGAATTC  1158