BAC Information

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BAC

Clone NameB6Ng01-075B05
Chromosome10 (Build37)
Map Location 124,026,769 - 124,167,947
singlet/doubletdoublet
Overlap genenone
Upstream geneAI851790, 4930503E24Rik
Downstream geneLOC671416, Slc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075B05.bB6Ng01-075B05.g
ACCDH891735DH891736
length1,2351,130
definitionDH891735|Mus musculus domesticus DNA, BAC clone: B6Ng01-075B05, 5' end.DH891736|Mus musculus domesticus DNA, BAC clone: B6Ng01-075B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,026,769 - 124,028,013)(124,166,811 - 124,167,947)
sequence
gaattccaagcaggtctattcaatttatttatcttactaatgctgataaa
tattgataataatcaaatgacgctaagaagatgttcagatgaagtattct
tcatcttcctttcagagatattaggtgactttgaaggtgagaatgaggca
tcgaatagattcgttttaattgactgagaatggttgtagttacttttgct
aaactttaatcttcaaactggaatgaaacccacctgactctgtagctcac
acagaaaacacacaaacacatcagataaagactaagttggcaaagcctac
atagtttacagacttctctactacttctggaatgactcgtaagtccacag
aagaatttatttcaagaagtttacaataaaatatcatacattacacaata
gcttgggattccgatgaggacttttattaagaatagaaaatacaaatata
aactgaatagaatttattaatataaacattagttatgcattctttgctca
agtactattgtttctaagtgtgtagaagttttgtttataatagtaaatgt
tttaacacagaataatattatattgaaaatggttaaactattatttaagg
tagactgcaatccatgaattattttttaattatctactgctaccaaaaac
tgtaaaaggtttaataatttaataagttatataacattaaactcattgcc
aagtcagtgaccttgcaaaacctctccaattgtttaaaaactacatgtgg
gaaaatcaataaatctttgacctttcatgattgaattaccagtccttagc
acagctctaacacttagagtgtgtgttcttcaggtatgctttacatcctt
gacagacagtgtaagaggacatcaaaggcgtggtcattcctgtggaaatg
ccaattacttcaccataaatggagaatctctcctatggaagtgcaaacaa
gcaaggcgtttgccttcattatcaaatgcaacttcttaaggacactgctc
catcagactgcccatgttcactgaatctcagagacagtactgtagcccaa
cagtccgatgccaggtaacttgtggaatataggagtaaacagttttttaa
ttgcattatacagaaaaaatttttttacagatgtaacctttgcacaattc
ttttttcttgtgaattaaatcaatatcaaggctattttctcactgctcga
gtctaatattcatttccacagcacataggccgatg
gaattccatgctatggtggataaattatatttcactacctggtgccaaca
ggctgccactataagctaaacttctgtacaatcatcgtttttattttttc
attgattgtctagcagatcataatttactttatccttttcaagccaagaa
ggctttgtgacacgccatggtttttgctgatatttaagctgcagtattta
gtgagtgcttcaagaatgtaggatgatttaataccttcttagtgaaagca
ttggtagctatctattaatgttacaaaaccaatgtacaatgcattcagaa
aacattagtggataaatgggtttttaaattttattttctttgaggccatt
cacaagttatttttatgcctgtataacattgttacgcagtgttataaaaa
gtgttatcctatgctccattaaggaaattgttatgaatagataatgtagg
aaaaattttcctaatcctgtaggaaaataatggcatgttgtcacattacg
tgggaaataaaacatatatatttaaatgtatataaacttatatacattaa
agtgaaaacagattacttgtttaatatgtaataattaatattatatatta
tttatattaatatgtgattatttgctaacactgtaacttgtagggaaaac
atacatattgtacttattaaacatctctaaacatttgcagttgtttaaat
gagaatggctccctttgtgtcctatatttacatgcatagtcccaagttgg
tagaaccgtttcagaaagattggctgtattaggaggtaaggccttgttgg
aggtaatacatcatggggtggatcttgagaaaagcacaagccaggcccag
cttctttctctcttactccctcctggagatcacatgtgagggctcagcta
cagtttcagcaccacagaactgccttgcccctgccctgatatcctagact
catcatctgaaactgcaagcaactcccagttacagcttctttataaatct
ccttcatcatgatttctctccagtcatagcaaagctgtacctgagacaac
atcgatcctttttttttttttttttaccttctcatggaaattgatttctc
ttttctattagcagaaccttaacaccctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_124026769_124028013
seq2: B6Ng01-075B05.b_46_1280

seq1  GAATTCCAAGCAGGTCTATTCAATTTATTTATCTTACTAATGCTGATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCAGGTCTATTCAATTTATTTATCTTACTAATGCTGATAAA  50

seq1  TATTGATAATAATCAAATGACGCTAAGAAGATGTTCAGATGAAGTATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATAATAATCAAATGACGCTAAGAAGATGTTCAGATGAAGTATTCT  100

seq1  TCATCTTCCTTTCAGAGATATTAGGTGACTTTGAAGGTGAGAATGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCCTTTCAGAGATATTAGGTGACTTTGAAGGTGAGAATGAGGCA  150

seq1  TCGAATAGATTCGTTTTAATTGACTGAGAATGGTTGTAGTTACTTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATAGATTCGTTTTAATTGACTGAGAATGGTTGTAGTTACTTTTGCT  200

seq1  AAACTTTAATCTTCAAACTGGAATGAAACCCACCTGACTCTGTAGCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAATCTTCAAACTGGAATGAAACCCACCTGACTCTGTAGCTCAC  250

seq1  ACAGAAAACACACAAACACATCAGATAAAGACTAAGTTGGCAAAGCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAACACACAAACACATCAGATAAAGACTAAGTTGGCAAAGCCTAC  300

seq1  ATAGTTTACAGACTTCTCTACTACTTCTGGAATGACTCGTAAGTCCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTACAGACTTCTCTACTACTTCTGGAATGACTCGTAAGTCCACAG  350

seq1  AAGAATTTATTTCAAGAAGTTTACAATAAAATATCATACATTACACAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTATTTCAAGAAGTTTACAATAAAATATCATACATTACACAATA  400

seq1  GCTTGGGATTCCGATGAGGACTTTTATTAAGAATAGAAAATACAAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGATTCCGATGAGGACTTTTATTAAGAATAGAAAATACAAATATA  450

seq1  AACTGAATAGAATTTATTAATATAAACATTAGTTATGCATTCTTTGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATAGAATTTATTAATATAAACATTAGTTATGCATTCTTTGCTCA  500

seq1  AGTACTATTGTTTCTAAGTGTGTAGAAGTTTTGTTTATAATAGTAAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTATTGTTTCTAAGTGTGTAGAAGTTTTGTTTATAATAGTAAATGT  550

seq1  TTTAACACAGAATAATATTATATTGAAAATGGTTAAACTATTATTTAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACACAGAATAATATTATATTGAAAATGGTTAAACTATTATTTAAGG  600

seq1  TAGACTGCAATCCATGAATTATTTTTTAATTATCTACTGCTACCAAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGCAATCCATGAATTATTTTTTAATTATCTACTGCTACCAAAAAC  650

seq1  TGTAAAAGGTTTAATAATTTAATAAGTTATATAACATTAAACTCATTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGGTTTAATAATTTAATAAGTTATATAACATTAAACTCATTGCC  700

seq1  AAGTCAGTGACCTTGCAAAACCTCTCCAATTGTTTAAAAACTACATGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTGACCTTGCAAAACCTCTCCAATTGTTTAAAAACTACATGTGG  750

seq1  GAAAATCAATAAATCTTTGACCTTTCATGATTGAATTACCAGTCCTTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAATAAATCTTTGACCTTTCATGATTGAATTACCAGTCCTTAGC  800

seq1  ACAGCTCTAACACTTAGAGTGTGTGTTCTTCAGGTATGCTTTACATCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTAACACTTAGAGTGTGTGTTCTTCAGGTATGCTTTACATCCTT  850

seq1  GACAGACAGTGTAAGAGGACATCAAAGGCGTGGTCATTCCTGTGGAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGTGTAAGAGGACATCAAAGGCGTGGTCATTCCTGTGGAAATG  900

seq1  CCAATTACTTCACCATAAATGGAGAATCTCTCCTATGGAAGGTGCAAACA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAATTACTTCACCATAAATGGAGAATCTCTCCTATGGAA-GTGCAAACA  949

seq1  AGCAGGGCGTTTGCCTTCATTATCAAATGCAACTTCTTAAGGACACTGCT  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCGTTTGCCTTCATTATCAAATGCAACTTCTTAAGGACACTGCT  999

seq1  CCATCAAGACTGCCCATGTTCACTGAATCTCAGAGACAGTACTGTAGCCC  1050
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATC-AGACTGCCCATGTTCACTGAATCTCAGAGACAGTACTGTAGCCC  1048

seq1  ACACAGTCCGATGCCAGGTAACTTGTGGAATATAGGAGTAAACAGTTTTT  1100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-ACAGTCCGATGCCAGGTAACTTGTGGAATATAGGAGTAAACAGTTTTT  1097

seq1  TTATTGCA-TATACAGAAAATA-TTTTTTACAGAATTGTAAACTTTGCAC  1148
      | |||||| ||||||||||| | |||||||||||  ||||| ||||||||
seq2  TAATTGCATTATACAGAAAAAATTTTTTTACAGA--TGTAACCTTTGCAC  1145

seq1  -ATTCTTTTT--CTGTGAAATTTTAAATCATTATCAA-GCTATTTTTCTC  1194
       |||||||||   ||||||   |||||||| |||||| |||| |||||||
seq2  AATTCTTTTTTCTTGTGAA---TTAAATCAATATCAAGGCTA-TTTTCTC  1191

seq1  AACTGCTCAGAAGGTTCTATATTATTCTATTCCAACAGCACATA-GCCGA  1243
       ||||||| ||      | || ||||| ||| | |||||||||| |||||
seq2  -ACTGCTC-GA-----GTCTAATATTC-ATTTCCACAGCACATAGGCCGA  1233

seq1  TG  1245
      ||
seq2  TG  1235

seq1: chr10_124166811_124167947
seq2: B6Ng01-075B05.g_69_1198 (reverse)

seq1  GTAGGGTG-TAGAGTGCTGCTAATAGAAAGGAGAAATCAATTTTCAAGGA  49
      |||||||| ||  || ||||||||||||| ||||||||||||| || |  
seq2  GTAGGGTGTTAAGGTTCTGCTAATAGAAAAGAGAAATCAATTTCCATGAG  50

seq1  GATGTAAAAAAAAAAAAAAAAGGATTCGATGTTGTCTCAGGTACAGCTTT  99
       | |||||||||||||||||| |  |||||||||||||||||||||||||
seq2  AAGGTAAAAAAAAAAAAAAAAAGGATCGATGTTGTCTCAGGTACAGCTTT  100

seq1  GCTATGACTGGAAGAGATATCATGATGAAGGAGATTTATAAAAGAAGGCT  149
      ||||||||||| ||||| ||||||||||||||||||||| |||||| |||
seq2  GCTATGACTGG-AGAGAAATCATGATGAAGGAGATTTAT-AAAGAA-GCT  147

seq1  GTAACTGGGAGTTTGCTTGCAGTTTCAGATGATGAGTCTAGGATTATCAG  199
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  GTAACTGGGAG-TTGCTTGCAGTTTCAGATGATGAGTCTAGGA-TATCAG  195

seq1  GGCAGGGGCAAGGCAGTTTCTTGTGGTGCTGAAACTGTAGCTGAGCCCTC  249
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  GGCAGGGGCAAGGCAGTT--CTGTGGTGCTGAAACTGTAGCTGAGCCCTC  243

seq1  ACATGTTGATCTCCAGGAGGGAGTAAGAGAGAAAGAAGCTGGGCCTGGCT  299
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATG-TGATCTCCAGGAGGGAGTAAGAGAGAAAGAAGCTGGGCCTGGCT  292

seq1  TGTGCTTTTCTCAAGATCCACCCCATGATGTATTACCTCCAACAAGGCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTTCTCAAGATCCACCCCATGATGTATTACCTCCAACAAGGCCT  342

seq1  TACCTCCTAATACAGCCAATCTTTCTGAAACGGTTCTACCAACTTGGGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTAATACAGCCAATCTTTCTGAAACGGTTCTACCAACTTGGGAC  392

seq1  TATGCATGTAAATATAGGACACAAAGGGAGCCATTCTCATTTAAACAACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATGTAAATATAGGACACAAAGGGAGCCATTCTCATTTAAACAACT  442

seq1  GCAAATGTTTAGAGATGTTTAATAAGTACAATATGTATGTTTTCCCTACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTTTAGAGATGTTTAATAAGTACAATATGTATGTTTTCCCTACA  492

seq1  AGTTACAGTGTTAGCAAATAATCACATATTAATATAAATAATATATAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGTGTTAGCAAATAATCACATATTAATATAAATAATATATAATA  542

seq1  TTAATTATTACATATTAAACAAGTAATCTGTTTTCACTTTAATGTATATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATTACATATTAAACAAGTAATCTGTTTTCACTTTAATGTATATA  592

seq1  AGTTTATATACATTTAAATATATATGTTTTATTTCCCACGTAATGTGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATATACATTTAAATATATATGTTTTATTTCCCACGTAATGTGACA  642

seq1  ACATGCCATTATTTTCCTACAGGATTAGGAAAATTTTTCCTACATTATCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCATTATTTTCCTACAGGATTAGGAAAATTTTTCCTACATTATCT  692

seq1  ATTCATAACAATTTCCTTAATGGAGCATAGGATAACACTTTTTATAACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAACAATTTCCTTAATGGAGCATAGGATAACACTTTTTATAACAC  742

seq1  TGCGTAACAATGTTATACAGGCATAAAAATAACTTGTGAATGGCCTCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAACAATGTTATACAGGCATAAAAATAACTTGTGAATGGCCTCAAA  792

seq1  GAAAATAAAATTTAAAAACCCATTTATCCACTAATGTTTTCTGAATGCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAATTTAAAAACCCATTTATCCACTAATGTTTTCTGAATGCAT  842

seq1  TGTACATTGGTTTTGTAACATTAATAGATAGCTACCAATGCTTTCACTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTGGTTTTGTAACATTAATAGATAGCTACCAATGCTTTCACTAA  892

seq1  GAAGGTATTAAATCATCCTACATTCTTGAAGCACTCACTAAATACTGCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTATTAAATCATCCTACATTCTTGAAGCACTCACTAAATACTGCAG  942

seq1  CTTAAATATCAGCAAAAACCATGGCGTGTCACAAAGCCTTCTTGGCTTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATATCAGCAAAAACCATGGCGTGTCACAAAGCCTTCTTGGCTTGA  992

seq1  AAAGGATAAAGTAAATTATGATCTGCTAGACAATCAATGAAAAAATAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATAAAGTAAATTATGATCTGCTAGACAATCAATGAAAAAATAAAA  1042

seq1  ACGATGATTGTACAGAAGTTTAGCTTATAGTGGCAGCCTGTTGGCACCAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGATTGTACAGAAGTTTAGCTTATAGTGGCAGCCTGTTGGCACCAG  1092

seq1  GTAGTGAAATATAATTTATCCACCATAGCATGGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAAATATAATTTATCCACCATAGCATGGAATTC  1130