BAC Information

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BAC

Clone NameB6Ng01-075D21
Chromosome10 (Build37)
Map Location 22,286,612 - 22,287,724
singlet/doubletsinglet
Overlap genenone
Upstream gene1700020N01Rik, EG432436, LOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072
Downstream geneLOC100040078, Slc2a12, Tbpl1, Tcf21, Eya4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075D21.bB6Ng01-075D21.g
ACCDH891853DH891854
length1,1361,112
definitionDH891853|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D21, 5' end.DH891854|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatagggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtgttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttagatcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttcatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
tagatctttcacttccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaagggtgttgtttccctaatttcttctcagcctgtt
tattcttgtatagagaaaggcattgacttgttttggagttaatttatatt
ccagctacttcaccgagctgttatcaggttgaggagttccctgggtagaa
atttttagggtaattatatactatccaatatctact
gaattcacctcacacagccactaaggcgtatcctagaggggtatattgtt
aagatccgaacatccagaagggctgccaaagcttagccacagcaatcttg
gtcctactcctgagacttggcaaaactttcccccaaatactctacatgga
acctggcaacctgcctgtacaagtgccatgggatcaccttgaaaaacaac
ctcaacttacagtcccacccgagggagctgtagtcctccttttttttttc
ttcccgaagccctttttgcattttgttccatttgctacgcacgaagtgcc
tgcatgggccaaattaaacaccaggtcatggaactgcagaaaatcactta
ccactgagcaaaagattcaagtcaaccagaactggtttgaatttgggcaa
gcaatactttctctgttctcttaccccagggttctgggtattaaaactac
atgtggagaaactccacataagagtaaatatcctggggctggagagatga
ctcagtagttaagggcactggctgctcttccagaggacctgggttccatg
accggcacccacatggtagctcataagcatgtcctgaggcatctgccgcc
ctcttctggcctccacaggaactgcatgcatatggtgcacagacatacat
acaggcaagacaccatgtaaaagtaaacttaaaattagaaaaaaaagaac
tatgtctacatagatggaagcagatctcggggttagagaaagactgggcc
ttgtgcgttttttaaaagcctttggagcaaagttgtctgacttctttctc
gaaacagtcatctttctgttcatctctatcccagttcaactattttagat
ttctaaagacatttgaaaggattacagtgaattggcgggctcctggtagc
caggggatacatctcacctcctgaattccctgatcttggcttctacctta
aggtttcctcaaagggtaactcgttgttaacatttctgtgaaaacactgg
tctctacttactacctctaagcaggagtgcagcatcacagatagtgacag
gagttctcatggcaactaataaggacgaggaaaggctgagtggcttttac
ggtcagcagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_22286612_22287724
seq2: B6Ng01-075D21.g_68_1179 (reverse)

seq1  TCTCTGCTGGCTGTAAAAGCCACTCAGCCTTTCCTCGTCC-TCTTAGTTG  49
      ||||||||| | |||||||||||||||||||||||||||| | |||||||
seq2  TCTCTGCTGACCGTAAAAGCCACTCAGCCTTTCCTCGTCCTTATTAGTTG  50

seq1  CCATGAGACTTCTTGTCACTATCTGTGATGCCTGCACTCCTGGCTTAGAG  99
      ||||||||  || ||||||||||||||||| |||||||||| ||||||||
seq2  CCATGAGAACTCCTGTCACTATCTGTGATG-CTGCACTCCT-GCTTAGAG  98

seq1  GTAGTAAGTAGAGACCAGTGTTTTCACAGAAATGTTAACACCGAGTTACC  149
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTAGTAAGTAGAGACCAGTGTTTTCACAGAAATGTTAACAACGAGTTACC  148

seq1  CTTTGAGGAAACCTTAAGGTAGAAGCCAAGATCAGGGAATTCAGGAGGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGAAACCTTAAGGTAGAAGCCAAGATCAGGGAATTCAGGAGGTG  198

seq1  AGATGTTATCCCCTGGCTACCAGGAGCCCGCCAATTCACTGTAATTCTTT  249
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGATG-TATCCCCTGGCTACCAGGAGCCCGCCAATTCACTGTAATCCTTT  247

seq1  CAAATGTCTTTAGAAATCT-AAATAGTTGAACTGGGATAGAGATGAACAG  298
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAAATGTCTTTAGAAATCTAAAATAGTTGAACTGGGATAGAGATGAACAG  297

seq1  AAAGATGACTGTTTCGAGAAAGAAGTCAGACAACTTTGCTCCAAAGGCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGACTGTTTCGAGAAAGAAGTCAGACAACTTTGCTCCAAAGGCTT  347

seq1  TTAAAAAACGCACAAGGCCCAGTCTTTCTCTAACCCCGAGATCTGCTTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAACGCACAAGGCCCAGTCTTTCTCTAACCCCGAGATCTGCTTCC  397

seq1  ATCTATGTAGACATAGTTCTTTTTTTTCTAATTTTAAGTTTACTTTTACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTAGACATAGTTCTTTTTTTTCTAATTTTAAGTTTACTTTTACA  447

seq1  TGGTGTCTTGCCTGTATGTATGTCTGTGCACCATATGCATGCAGTTCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTTGCCTGTATGTATGTCTGTGCACCATATGCATGCAGTTCCTG  497

seq1  TGGAGGCCAGAAGAGGGCGGCAGATGCCTCAGGACATGCTTATGAGCTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCCAGAAGAGGGCGGCAGATGCCTCAGGACATGCTTATGAGCTAC  547

seq1  CATGTGGGTGCCGGTCATGGAACCCAGGTCCTCTGGAAGAGCAGCCAGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGTGCCGGTCATGGAACCCAGGTCCTCTGGAAGAGCAGCCAGTG  597

seq1  CCCTTAACTACTGAGTCATCTCTCCAGCCCCAGGATATTTACTCTTATGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAACTACTGAGTCATCTCTCCAGCCCCAGGATATTTACTCTTATGT  647

seq1  GGAGTTTCTCCACATGTAGTTTTAATACCCAGAACCCTGGGGTAAGAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCTCCACATGTAGTTTTAATACCCAGAACCCTGGGGTAAGAGAA  697

seq1  CAGAGAAAGTATTGCTTGCCCAAATTCAAACCAGTTCTGGTTGACTTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAGTATTGCTTGCCCAAATTCAAACCAGTTCTGGTTGACTTGAA  747

seq1  TCTTTTGCTCAGTGGTAAGTGATTTTCTGCAGTTCCATGACCTGGTGTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGCTCAGTGGTAAGTGATTTTCTGCAGTTCCATGACCTGGTGTTT  797

seq1  AATTTGGCCCATGCAGGCACTTCGTGCGTAGCAAATGGAACAAAATGCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGCCCATGCAGGCACTTCGTGCGTAGCAAATGGAACAAAATGCAA  847

seq1  AAAGGGCTTCGGGAAGAAAAAAAAAAGGAGGACTACAGCTCCCTCGGGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCTTCGGGAAGAAAAAAAAAAGGAGGACTACAGCTCCCTCGGGTG  897

seq1  GGACTGTAAGTTGAGGTTGTTTTTCAAGGTGATCCCATGGCACTTGTACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTAAGTTGAGGTTGTTTTTCAAGGTGATCCCATGGCACTTGTACA  947

seq1  GGCAGGTTGCCAGGTTCCATGTAGAGTATTTGGGGGAAAGTTTTGCCAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTTGCCAGGTTCCATGTAGAGTATTTGGGGGAAAGTTTTGCCAAG  997

seq1  TCTCAGGAGTAGGACCAAGATTGCTGTGGCTAAGCTTTGGCAGCCCTTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGAGTAGGACCAAGATTGCTGTGGCTAAGCTTTGGCAGCCCTTCT  1047

seq1  GGATGTTCGGATCTTAACAATATACCCCTCTAGGATACGCCTTAGTGGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTCGGATCTTAACAATATACCCCTCTAGGATACGCCTTAGTGGCT  1097

seq1  GTGTGAGGTGAATTC  1113
      |||||||||||||||
seq2  GTGTGAGGTGAATTC  1112