BAC Information

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BAC

Clone NameB6Ng01-075J22
Chromosome10 (Build37)
Map Location 83,406,421 - 83,407,552
singlet/doubletsinglet
Overlap genenone
Upstream geneEG216185, Chst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225
Downstream geneC230099D08Rik, LOC432482, Nuak1, Ckap4, Tcp11l2, Polr3b, Rfx4, EG625690, Ric8b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075J22.bB6Ng01-075J22.g
ACCDH892129DH892130
length1,1451,134
definitionDH892129|Mus musculus domesticus DNA, BAC clone: B6Ng01-075J22, 5' end.DH892130|Mus musculus domesticus DNA, BAC clone: B6Ng01-075J22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaggccagt
ttgctaattggcctcagggcaatcggctaccaggtgcactcccgccctat
gcggagtccccgccctgcgtagtgcgtcagcccgtagtgcgtcagcaatg
cgcagagaggcagtgcgcagactcattcattccccgagaggaacaaagga
aaatagaacaggcatttccggtctttgaaggagccgagggtgggcgagtc
cacgctccggtagaatatgtgcagattaaatatggaatcaatgctaattt
taccttggtgcagttagacaggcttgccagcatggcactaactcctgccg
actggcaaatgattgcaaaagccgctctccctaatatgggcaaatatttg
gaatggagatctctgtggcgagaggctgcacaggcgcaggaccgagcaaa
cgctgctgctttaactccagagcagagagattggacttttgacttgttaa
cgggtcagagagcttattctgctgaacctgataagaggtatcaatggaag
gtcttaccacagggaatgtccaatagtcctactatgtgtcaactttatgt
gcacatggatgacatcctcctgtgccataaagaccttaccatgctacaaa
aggcatatccttttctacttaaaactttaagtcagtggggtttacagata
gccacagaaaaggtccaaatttctgatacaggacaattcttgggctctgt
ggtgtccccagataagattgtgccccaaaaggtagagataagaagagatc
acctccataccttaaatgattttcaaaagctgttgggagatattaattgg
ctcagaccttttttaaagattccttccgctgagttaaggcctttgtttag
tattttagaagagatcctcatatctctccctaggactcttactctagctg
ctaacaggccttacaaaagtgaaaagcctaaagaatgcacattacacgta
ttgagattcgcagcttcagtttgttgtgtctttaagacagcacattgcac
tgcagtttggtgccagatggccatttgttgtggatccatccaaaa
gaattcagggatgcataaatacaattgacacaggtacctattttagtttt
ccttgaagcctttacattgggaaatgactacgtccacttaacatggttct
ggtagacttaaaaccaccatgatccaattcattaagccccttgtagtccc
ccctaccacctctcaccagcacagaactgggacaatagtccagaatgagc
tacaaggctccacccttcaacatagtggttggtaagggacagaaaaaaga
cccaattcaagcctttttctaaaaaaaaatattaaaaataaataaataat
atataaaatacatattttaagtgtgcactgaaaaatagaaactgttttcg
tctgctcttgtctataggccatgctggaatgatgtgtataagggacccct
agtggcaatttgtccattactactagaaagagaatgcctgtaaaatatct
ctaagtctaatgcccaaaggaagtcaaagtcagacagatgaagaaggagg
aagaggaagaggtctaatagcatttcacaagatagagctgtgcctaaagc
caaccaccaatgggcttccatgtgttaggagtttacaaactgattggaac
ttaaaccaaatcttagattctgtcatcaaaatccaaaaggcctagactca
tgagaaagactagactctgagggttcctaataaggtatagccaatgtgca
cactatttgtgtgtgtgtagtgtgcacacaactactgactcagtgtcaac
actgataaagtagataaagtgtgtgattggggctggggagatcgatggct
cggttggtgctaggcagggtattgtgcactcgaaacctcaatgctgataa
gataggcacagaagactttcagggcttgttgtccagcagcctagtctaat
taggagagatccagggccaagagagaggcgttgcctcaaaaagccaagta
gatggaagcttgagaatgtcactcaacacggaactctggccctcatgggt
actggattgttatcccatacacttatccataacaccacatatgctatctt
aaattctggcatgaaatcagttgtgtcctataaacatggctaaaaaaaat
ggaatggcatttcccaaacattcactcccactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_83406421_83407552
seq2: B6Ng01-075J22.g_70_1203 (reverse)

seq1  ACAGT-GGAGTGAATGTTT-GGAAATG-CATT-CATTTTTATAAGCAATG  46
      ||||| ||||||||||||| ||||||| |||| ||||||| | ||| |||
seq2  ACAGTGGGAGTGAATGTTTGGGAAATGCCATTCCATTTTTTTTAGCCATG  50

seq1  TTATAAGTACACAACTTGGATTTCATGCCAGATTTTAAGATAGGCATATG  96
      ||   || ||||||||  |||||||||||||| ||||||||| |||||||
seq2  TTTATAGGACACAACT--GATTTCATGCCAGAATTTAAGATA-GCATATG  97

seq1  T-GTGGTATGGATAAGTGTATGGGAATATACAAATCAGTACCCATGAGGG  145
      | ||| |||||||||||||||||| ||| ||||  |||||||||||||||
seq2  TGGTGTTATGGATAAGTGTATGGG-ATA-ACAATCCAGTACCCATGAGGG  145

seq1  CCAGAGTTCGGTGTTGAGTGACATTTCTC-AGCTTCCATCTACTTGGCTT  194
      ||||||||| ||||||||||||| ||||| ||||||||||||||||||||
seq2  CCAGAGTTCCGTGTTGAGTGACA-TTCTCAAGCTTCCATCTACTTGGCTT  194

seq1  TTTGAGGCAACGCCTCTCTCTTGGCCCTGGATCTCTCCT-ATTAGACTAG  243
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTGAGGCAACGCCTCTCTCTTGGCCCTGGATCTCTCCTAATTAGACTAG  244

seq1  GCTGCTGGACAACAAGCCCTGAGAGTCTTCTGTGCCTATCTTATCAGCAT  293
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTGCTGGACAACAAGCCCTGAAAGTCTTCTGTGCCTATCTTATCAGCAT  294

seq1  TGAGGTTTCGAGTGCACAATACCCTGCCTAGCACCAACCGAGCCATCGAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTCGAGTGCACAATACCCTGCCTAGCACCAACCGAGCCATCGAT  344

seq1  CTCCCCAGCCCCAATCACACACTTTATCTACTTTATCAGTGTTGACACTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCCCCAATCACACACTTTATCTACTTTATCAGTGTTGACACTG  394

seq1  AGTCAGTAGTTGTGTGCACACTACACACACAC-AATAGTGTGCACATTGG  442
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGTCAGTAGTTGTGTGCACACTACACACACACAAATAGTGTGCACATTGG  444

seq1  CTATACCTTATTAGGAACCCTCAGAGTCTAGTCTTTCTCATGAGTCTAGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCTTATTAGGAACCCTCAGAGTCTAGTCTTTCTCATGAGTCTAGG  494

seq1  CCTTTTGGATTTTGATGACAGAATCTAAGATTTGGTTTAAGTTCCAATCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGGATTTTGATGACAGAATCTAAGATTTGGTTTAAGTTCCAATCA  544

seq1  GTTTGTAAACTCCTAACACATGGAAGCCCATTGGTGGTTGGCTTTAGGCA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAAACTCCTAACACATGGAAGCCCATTGGTGGTTGGCTTTAGGCA  594

seq1  CAGCTCTATCTTGTGAAATGCTATTAGACCTCTTCCTCTTCCTCCTTCTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTATCTTGTGAAATGCTATTAGACCTCTTCCTCTTCCTCCTTCTT  644

seq1  CATCTGTCTGACTTTGACTTCCTTTGGGCATTAGACTTAGAGATATTTTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCTGACTTTGACTTCCTTTGGGCATTAGACTTAGAGATATTTTA  694

seq1  CAGGCATTCTCTTTCTAGTAGTAATGGACAAATTGCCACTAGGGGTCCCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATTCTCTTTCTAGTAGTAATGGACAAATTGCCACTAGGGGTCCCT  744

seq1  TATACACATCATTCCAGCATGGCCTATAGACAAGAGCAGACGAAAACAGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACATCATTCCAGCATGGCCTATAGACAAGAGCAGACGAAAACAGT  794

seq1  TTCTATTTTTCAGTGCACACTTAAAATATGTATTTTATATATTATTTATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTTCAGTGCACACTTAAAATATGTATTTTATATATTATTTATT  844

seq1  TATTTTTAATATTTTTTTTTAGAAAAAGGCTTGAATTGGGTCTTTTTTCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAATATTTTTTTTTAGAAAAAGGCTTGAATTGGGTCTTTTTTCT  894

seq1  GTCCCTTACCAACCACTATGTTGAAGGGTGGAGCCTTGTAGCTCATTCTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTACCAACCACTATGTTGAAGGGTGGAGCCTTGTAGCTCATTCTG  944

seq1  GACTATTGTCCCAGTTCTGTGCTGGTGAGAGGTGGTAGGGGGGACTACAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTGTCCCAGTTCTGTGCTGGTGAGAGGTGGTAGGGGGGACTACAA  994

seq1  GGGGCTTAATGAATTGGATCATGGTGGTTTTAAGTCTACCAGAACCATGT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTAATGAATTGGATCATGGTGGTTTTAAGTCTACCAGAACCATGT  1044

seq1  TAAGTGGACGTAGTCATTTCCCAATGTAAAGGCTTCAAGGAAAACTAAAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGACGTAGTCATTTCCCAATGTAAAGGCTTCAAGGAAAACTAAAA  1094

seq1  TAGGTACCTGTGTCAATTGTATTTATGCATCCCTGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACCTGTGTCAATTGTATTTATGCATCCCTGAATTC  1134